RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 MIF4GDA9UHW6 222 aaKnown RBP-0.34□□□□□ -2.46
ECHDC1-201ENST00000368287 ERCC6L2Q5T890 1561 aa-0.34□□□□□ -2.46
ECHDC1-201ENST00000368287 Q8IZM0 81 aa-0.34□□□□□ -2.46
ECHDC1-201ENST00000368287 SMIM4Q8WVI0 70 aa-0.34□□□□□ -2.46
ECHDC1-201ENST00000368287 NDUFA4L2Q9NRX3 87 aa-0.34□□□□□ -2.46
ECHDC1-201ENST00000368287 ROBO1Q9Y6N7 1651 aa-0.34□□□□□ -2.46
ECHDC1-201ENST00000368287 ALMS1Q8TCU4 4167 aa-0.35□□□□□ -2.46
ECHDC1-201ENST00000368287 GVINP1Q7Z2Y8 2422 aa-0.35□□□□□ -2.46
ECHDC1-201ENST00000368287 K7EP13 123 aa-0.35□□□□□ -2.47
ECHDC1-201ENST00000368287 S100A12P80511 92 aa-0.35□□□□□ -2.47
ECHDC1-201ENST00000368287 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.35□□□□□ -2.47
ECHDC1-201ENST00000368287 NAA60Q9H7X0 242 aa-0.35□□□□□ -2.47
ECHDC1-201ENST00000368287 SPCS1Q9Y6A9 102 aa-0.35□□□□□ -2.47
ECHDC1-201ENST00000368287 I3L2K1 104 aa-0.36□□□□□ -2.47
ECHDC1-201ENST00000368287 PRM1P04553 51 aa-0.36□□□□□ -2.47
ECHDC1-201ENST00000368287 SPRR1AP35321 89 aa-0.36□□□□□ -2.47
ECHDC1-201ENST00000368287 TMEM170BQ5T4T1 132 aa-0.36□□□□□ -2.47
ECHDC1-201ENST00000368287 Q5VSD8 79 aa-0.36□□□□□ -2.47
ECHDC1-201ENST00000368287 CPSF1Q10570 1443 aaKnown RBP-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 C10orf71Q711Q0 1435 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 PIGBOS1A0A0B4J2F0 54 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 CATR1Q13166 79 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 Q56UQ5 140 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 TSC22D3Q99576 134 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 TP53AIP1Q9HCN2 124 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 LINC00474Q9P2X8 69 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 CSPG4Q6UVK1 2322 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 RIMS1Q86UR5 1692 aaKnown RBP-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 QRICH2Q9H0J4 1663 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 DCHS2Q6V1P9 2916 aa-0.37□□□□□ -2.47
ECHDC1-201ENST00000368287 BTAF1O14981 1849 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 TRBV7-3A0A075B6L6 115 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 IGLC7A0M8Q6 106 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 HMGN1P05114 100 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 BTG2P78543 158 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 Q6JHZ5 121 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 BAGE2Q86Y30 109 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 SPANXDQ9BXN6 97 aa-0.38□□□□□ -2.47
ECHDC1-201ENST00000368287 F8VRH5 84 aa-0.39□□□□□ -2.47
ECHDC1-201ENST00000368287 PPP3R2Q96LZ3 170 aa-0.39□□□□□ -2.47
ECHDC1-201ENST00000368287 MGST2Q99735 147 aa-0.39□□□□□ -2.47
ECHDC1-201ENST00000368287 DYNLRB1Q9NP97 96 aa-0.39□□□□□ -2.47
ECHDC1-201ENST00000368287 SHROOM2Q13796 1616 aa-0.39□□□□□ -2.47
ECHDC1-201ENST00000368287 FLNAP21333 2647 aaKnown RBP-0.39□□□□□ -2.47
ECHDC1-201ENST00000368287 PIEZO2Q9H5I5 2752 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 TCHHQ07283 1943 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 FXYD6-FXYD2A0A087WZ82 144 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 HMGN4O00479 90 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 SPRR2DP22532 72 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 PAPPAQ13219 1627 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 STAB1Q9NY15 2570 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 HECTD4Q9Y4D8 3996 aa-0.4□□□□□ -2.47
ECHDC1-201ENST00000368287 OOSP1A8MZH6 123 aa-0.41□□□□□ -2.48
ECHDC1-201ENST00000368287 UQCR11O14957 56 aa-0.41□□□□□ -2.48
ECHDC1-201ENST00000368287 APOC2P02655 101 aa-0.41□□□□□ -2.48
ECHDC1-201ENST00000368287 LINC01558Q9Y6Z2 57 aa-0.41□□□□□ -2.48
ECHDC1-201ENST00000368287 MAP1BP46821 2468 aaKnown RBP-0.41□□□□□ -2.48
ECHDC1-201ENST00000368287 GOLGA4Q13439 2230 aaKnown RBP-0.41□□□□□ -2.48
ECHDC1-201ENST00000368287 TSC2P49815 1807 aa-0.42□□□□□ -2.48
ECHDC1-201ENST00000368287 FGF7P21781 194 aa-0.42□□□□□ -2.48
ECHDC1-201ENST00000368287 COX17Q14061 63 aa-0.42□□□□□ -2.48
ECHDC1-201ENST00000368287 C5orf38Q86SI9 138 aa-0.42□□□□□ -2.48
ECHDC1-201ENST00000368287 BCL9LQ86UU0 1499 aa-0.42□□□□□ -2.48
ECHDC1-201ENST00000368287 ROCK2O75116 1388 aaKnown RBP-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 BSNQ9UPA5 3926 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 ARHGEF5Q12774 1597 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 TRBV6-1A0A0K0K1D8 114 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 AKAIN1P0CW23 69 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 S100A3P33764 101 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 COMMD6Q7Z4G1 85 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 ATRQ13535 2644 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 ZANQ9Y493 2812 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 CUL7Q14999 1698 aa-0.43□□□□□ -2.48
ECHDC1-201ENST00000368287 DCDP81605 110 aaKnown RBP-0.44□□□□□ -2.48
ECHDC1-201ENST00000368287 C8orf59Q8N0T1 100 aaPredicted RBP-0.44□□□□□ -2.48
ECHDC1-201ENST00000368287 NAIPQ13075 1403 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 ZFHX3Q15911 3703 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 KDM5AP29375 1690 aaKnown RBP-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 MYOM1P52179 1685 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 A2ML1A8K2U0 1454 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 APOC3P02656 99 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 TPPP2P59282 170 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 PP6455Q8WZ26 134 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 WNK1Q9H4A3 2382 aa-0.45□□□□□ -2.48
ECHDC1-201ENST00000368287 NSD3Q9BZ95 1437 aa-0.46□□□□□ -2.48
ECHDC1-201ENST00000368287 CHKB-CPT1BH3BT56 60 aa-0.46□□□□□ -2.48
ECHDC1-201ENST00000368287 SSSCA1O60232 199 aa-0.46□□□□□ -2.48
ECHDC1-201ENST00000368287 SFT2D2O95562 160 aa-0.46□□□□□ -2.48
ECHDC1-201ENST00000368287 IFNGP01579 166 aa-0.46□□□□□ -2.48
ECHDC1-201ENST00000368287 MRPL54Q6P161 138 aaKnown RBP-0.46□□□□□ -2.48
ECHDC1-201ENST00000368287 SPTA1P02549 2419 aa-0.46□□□□□ -2.48
ECHDC1-201ENST00000368287 PIGYQ3MUY2 71 aa-0.47□□□□□ -2.48
ECHDC1-201ENST00000368287 C9orf153Q5TBE3 101 aa-0.47□□□□□ -2.48
ECHDC1-201ENST00000368287 C1orf54Q8WWF1 131 aa-0.47□□□□□ -2.48
ECHDC1-201ENST00000368287 MUC12Q9UKN1 5478 aa-0.47□□□□□ -2.49
ECHDC1-201ENST00000368287 NALCNQ8IZF0 1738 aa-0.47□□□□□ -2.49
ECHDC1-201ENST00000368287 SRRM2Q9UQ35 2752 aaKnown RBP-0.48□□□□□ -2.49
ECHDC1-201ENST00000368287 RAPGEF6Q8TEU7 1601 aa-0.48□□□□□ -2.49
ECHDC1-201ENST00000368287 TET3O43151 1660 aa-0.48□□□□□ -2.49
ECHDC1-201ENST00000368287 A0A1B0GV90 55 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms