RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SS18Q15532 418 aa8.48□□□□□ -1.05
VAMP4-202ENST00000367740 KRTAP5-3Q6L8H2 238 aa8.48□□□□□ -1.05
VAMP4-202ENST00000367740 TPPP3Q9BW30 176 aa8.48□□□□□ -1.05
VAMP4-202ENST00000367740 CTXND1A0A1B0GTU2 59 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 C19orf71A6NCJ1 209 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 M0QXV9 152 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 ZNF861PO60384 105 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 NCR2O95944 276 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 IGLC6P0CF74 106 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 ESDP10768 282 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 MALP21145 153 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 TCEAL7Q9BRU2 100 aa8.47□□□□□ -1.05
VAMP4-202ENST00000367740 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
VAMP4-202ENST00000367740 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.06
VAMP4-202ENST00000367740 BTF3L4Q96K17 158 aa8.46□□□□□ -1.06
VAMP4-202ENST00000367740 COX7A2LO14548 114 aa8.45□□□□□ -1.06
VAMP4-202ENST00000367740 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
VAMP4-202ENST00000367740 STOML3Q8TAV4 291 aa8.45□□□□□ -1.06
VAMP4-202ENST00000367740 TMEM101Q96IK0 257 aa8.45□□□□□ -1.06
VAMP4-202ENST00000367740 FHITP49789 147 aa8.44□□□□□ -1.06
VAMP4-202ENST00000367740 GATD1Q8NB37 220 aa8.44□□□□□ -1.06
VAMP4-202ENST00000367740 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 TRGC1P0CF51 173 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 SPAG11BQ08648 103 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 KRTAP13-2Q52LG2 175 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 CST9LP1Q5W188 147 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 BAGE2Q86Y30 109 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 OR2D3Q8NGH3 330 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 CCDC32Q9BV29 185 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 PPDPFQ9H3Y8 114 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
VAMP4-202ENST00000367740 G3V3Q6 166 aa8.42□□□□□ -1.06
VAMP4-202ENST00000367740 RPL39LQ96EH5 51 aaKnown RBP8.42□□□□□ -1.06
VAMP4-202ENST00000367740 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
VAMP4-202ENST00000367740 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
VAMP4-202ENST00000367740 DEFA1P59665 94 aa8.41□□□□□ -1.06
VAMP4-202ENST00000367740 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
VAMP4-202ENST00000367740 IMMP2LQ96T52 175 aa8.41□□□□□ -1.06
VAMP4-202ENST00000367740 S100A9P06702 114 aaKnown RBP8.4□□□□□ -1.06
VAMP4-202ENST00000367740 MZT2BQ6NZ67 158 aa8.4□□□□□ -1.06
VAMP4-202ENST00000367740 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.06
VAMP4-202ENST00000367740 MAP1LC3B2A6NCE7 125 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 C1orf196B1AJZ1 125 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 TSHBP01222 138 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 MT1HP80294 61 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 C10orf25Q5T742 122 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 C5orf38Q86SI9 138 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 MRPL52Q86TS9 123 aaKnown RBP8.39□□□□□ -1.07
VAMP4-202ENST00000367740 MAP1LC3BQ9GZQ8 125 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 SMDT1Q9H4I9 107 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
VAMP4-202ENST00000367740 TMEM238LA0A1B0GVL6 79 aa8.38□□□□□ -1.07
VAMP4-202ENST00000367740 F2Z2F3 143 aa8.37□□□□□ -1.07
VAMP4-202ENST00000367740 PAGE4O60829 102 aa8.37□□□□□ -1.07
VAMP4-202ENST00000367740 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
VAMP4-202ENST00000367740 LYZL1Q6UWQ5 148 aa8.37□□□□□ -1.07
VAMP4-202ENST00000367740 OR10D4PQ8NGN7 298 aa8.37□□□□□ -1.07
VAMP4-202ENST00000367740 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
VAMP4-202ENST00000367740 SSNA1O43805 119 aa8.36□□□□□ -1.07
VAMP4-202ENST00000367740 RPS20P60866 119 aaKnown RBP8.36□□□□□ -1.07
VAMP4-202ENST00000367740 RPL7L1Q6DKI1 246 aaKnown RBP8.36□□□□□ -1.07
VAMP4-202ENST00000367740 ENKURQ8TC29 256 aa8.36□□□□□ -1.07
VAMP4-202ENST00000367740 MRAP2Q96G30 205 aa8.36□□□□□ -1.07
VAMP4-202ENST00000367740 I3L3M4 83 aa8.35□□□□□ -1.07
VAMP4-202ENST00000367740 NDUFA1O15239 70 aa8.35□□□□□ -1.07
VAMP4-202ENST00000367740 NUPR1O60356 82 aa8.35□□□□□ -1.07
VAMP4-202ENST00000367740 KRTAP19-2Q3LHN2 52 aa8.35□□□□□ -1.07
VAMP4-202ENST00000367740 CTDSP1Q9GZU7 261 aa8.35□□□□□ -1.07
VAMP4-202ENST00000367740 ALG5Q9Y673 324 aa8.35□□□□□ -1.07
VAMP4-202ENST00000367740 PMCHP20382 165 aa8.34□□□□□ -1.07
VAMP4-202ENST00000367740 KRTAP13-3Q3SY46 172 aa8.34□□□□□ -1.07
VAMP4-202ENST00000367740 RNASE13Q5GAN3 156 aaKnown RBP8.34□□□□□ -1.07
VAMP4-202ENST00000367740 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
VAMP4-202ENST00000367740 LCE5AQ5TCM9 118 aa8.34□□□□□ -1.07
VAMP4-202ENST00000367740 UNQ6190/PRO20217Q6UXQ8 127 aa8.34□□□□□ -1.07
VAMP4-202ENST00000367740 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
VAMP4-202ENST00000367740 TMEM242Q9NWH2 141 aa8.34□□□□□ -1.07
VAMP4-202ENST00000367740 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
VAMP4-202ENST00000367740 F8WDY8 70 aa8.33□□□□□ -1.08
VAMP4-202ENST00000367740 CTRLP40313 264 aa8.33□□□□□ -1.08
VAMP4-202ENST00000367740 KRTAP10-6P60371 365 aaPredicted RBP8.33□□□□□ -1.08
VAMP4-202ENST00000367740 AKR1C8PQ5T2L2 129 aa8.33□□□□□ -1.08
VAMP4-202ENST00000367740 LINC00242Q5T6M2 205 aa8.33□□□□□ -1.08
VAMP4-202ENST00000367740 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
VAMP4-202ENST00000367740 RPL35P42766 123 aaKnown RBP8.32□□□□□ -1.08
VAMP4-202ENST00000367740 RPL28P46779 137 aaKnown RBP8.32□□□□□ -1.08
VAMP4-202ENST00000367740 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
VAMP4-202ENST00000367740 CTAG1AP78358 180 aa8.32□□□□□ -1.08
VAMP4-202ENST00000367740 TWIST1Q15672 202 aa8.32□□□□□ -1.08
VAMP4-202ENST00000367740 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
VAMP4-202ENST00000367740 RNASE7Q9H1E1 156 aaKnown RBP8.32□□□□□ -1.08
VAMP4-202ENST00000367740 TMUB2Q71RG4 321 aa8.31□□□□□ -1.08
VAMP4-202ENST00000367740 CNFNQ9BYD5 112 aa8.31□□□□□ -1.08
VAMP4-202ENST00000367740 BATF3Q9NR55 127 aa8.31□□□□□ -1.08
VAMP4-202ENST00000367740 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
VAMP4-202ENST00000367740 C7orf77A4D0Y5 90 aa8.3□□□□□ -1.08
VAMP4-202ENST00000367740 IFNA1P01562 189 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms