RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ARHGEF12Q9NZN5 1544 aa1.25□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TMEM14DPA8MWL7 114 aa1.25□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TMEM170BQ5T4T1 132 aa1.25□□□□□ -2.21
RNU6-1249P-201ENST00000363237 CLTCQ00610 1675 aaKnown RBP1.25□□□□□ -2.21
RNU6-1249P-201ENST00000363237 PLEKHH2Q8IVE3 1493 aa1.24□□□□□ -2.21
RNU6-1249P-201ENST00000363237 RGPD4Q7Z3J3 1758 aa1.24□□□□□ -2.21
RNU6-1249P-201ENST00000363237 M0R135 149 aa1.24□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SFT2D2O95562 160 aa1.24□□□□□ -2.21
RNU6-1249P-201ENST00000363237 ASIPP42127 132 aa1.24□□□□□ -2.21
RNU6-1249P-201ENST00000363237 ABCC3O15438 1527 aa1.24□□□□□ -2.21
RNU6-1249P-201ENST00000363237 MLH3Q9UHC1 1453 aa1.24□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SCN7AQ01118 1682 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 COL4A6Q14031 1691 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 GVQW2A0A096LPI5 108 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 CTXND1A0A1B0GTU2 59 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 IGLC7A0M8Q6 106 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 F8VRH5 84 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 UQCR11O14957 56 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 IGLC1P0CG04 106 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TRAPPC2P0DI81 140 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TRAPPC2BP0DI82 140 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 KRTAP10-4P60372 401 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 BAGE2Q86Y30 109 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SMIM4Q8WVI0 70 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TRGV9Q99603 122 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 FAIMQ9NVQ4 179 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 HMGXB3Q12766 1538 aa1.23□□□□□ -2.21
RNU6-1249P-201ENST00000363237 PDCD11Q14690 1871 aaKnown RBP1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 ZNF236Q9UL36 1845 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SSC5DA1L4H1 1573 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 ZMYM4Q5VZL5 1548 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 TRBV7-7A0A0K0K1E9 115 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 APOC3P02656 99 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 SERP2Q8N6R1 65 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 LINC01558Q9Y6Z2 57 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 LRRC37A2A6NM11 1700 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 MON2Q7Z3U7 1717 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 COL6A6A6NMZ7 2263 aa1.22□□□□□ -2.21
RNU6-1249P-201ENST00000363237 GYPAP02724 150 aa1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 ZNF137PP52743 207 aa1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 COX17Q14061 63 aa1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 SPINK9Q5DT21 86 aa1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 C9orf62Q8N4C0 152 aa1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 NXT2Q9NPJ8 142 aaKnown RBP1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 RAPGEF6Q8TEU7 1601 aa1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 RGPD3A6NKT7 1758 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1249P-201ENST00000363237 ABCA1O95477 2261 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 NUP188Q5SRE5 1749 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 BTAF1O14981 1849 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 ROS1P08922 2347 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 CFAP126Q5VTH2 177 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 Q6ZRX8 168 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 PRR15LQ9BU68 103 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 CACFD1Q9UGQ2 172 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 PPLO60437 1756 aa1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 EPRSP07814 1512 aaKnown RBP1.2□□□□□ -2.22
RNU6-1249P-201ENST00000363237 FANCAO15360 1455 aa1.19□□□□□ -2.22
RNU6-1249P-201ENST00000363237 SAA2P0DJI9 122 aaPredicted RBP1.19□□□□□ -2.22
RNU6-1249P-201ENST00000363237 ARL2-SNX15V9GYD0 113 aa1.19□□□□□ -2.22
RNU6-1249P-201ENST00000363237 UNC13BO14795 1591 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 WNK3Q9BYP7 1800 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 F5P12259 2224 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 A0A0G2JND7 137 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 SYS1-DBNDD2H3BUS1 97 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 H7BZZ5 65 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 MGPP08493 103 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 GCHFRP30047 84 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 FAUP35544 74 aaKnown RBP1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 SFTA2Q6UW10 78 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 FAM223AQ8IWN6 122 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 NPVFQ9HCQ7 196 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 MED14O60244 1454 aa1.18□□□□□ -2.22
RNU6-1249P-201ENST00000363237 KDM3BQ7LBC6 1761 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 UQCRHLA0A096LP55 91 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 PIN1P1O15428 100 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 UQCRHP07919 91 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 PMCHL1Q16048 86 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 PROK2Q9HC23 129 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 MYO3AQ8NEV4 1616 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 CCDC18Q5T9S5 1454 aa1.17□□□□□ -2.22
RNU6-1249P-201ENST00000363237 CEP162Q5TB80 1403 aa1.16□□□□□ -2.22
RNU6-1249P-201ENST00000363237 TRBV25-1A0A075B6N4 114 aa1.16□□□□□ -2.22
RNU6-1249P-201ENST00000363237 FAM223BA6NKX1 122 aa1.16□□□□□ -2.22
RNU6-1249P-201ENST00000363237 G3V318 75 aa1.16□□□□□ -2.22
RNU6-1249P-201ENST00000363237 ATP10BO94823 1461 aa1.16□□□□□ -2.22
RNU6-1249P-201ENST00000363237 ABCC2Q92887 1545 aa1.15□□□□□ -2.22
RNU6-1249P-201ENST00000363237 PLXNB2O15031 1838 aa1.15□□□□□ -2.22
RNU6-1249P-201ENST00000363237 ZDBF2Q9HCK1 2354 aa1.15□□□□□ -2.23
RNU6-1249P-201ENST00000363237 PYY3Q5JQD4 70 aa1.14□□□□□ -2.23
RNU6-1249P-201ENST00000363237 MYO7BQ6PIF6 2116 aa1.14□□□□□ -2.23
RNU6-1249P-201ENST00000363237 LINC00472Q9H8W2 130 aa1.14□□□□□ -2.23
RNU6-1249P-201ENST00000363237 MYH4Q9Y623 1939 aa1.14□□□□□ -2.23
RNU6-1249P-201ENST00000363237 IQSEC2Q5JU85 1478 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 UBR1Q8IWV7 1749 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 MUC6Q6W4X9 2439 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 A0A1B0GWA3 101 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 K7EP34 96 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 PSMG4Q5JS54 123 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 SPRR4Q96PI1 79 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 C20orf78Q9BR46 151 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms