RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ADAMTSL4-AS1Q5T5F5 129 aa13.96□□□□□ -0.18
CMTM3-201ENST00000361909 LINC00643Q86TS7 51 aa13.96□□□□□ -0.18
CMTM3-201ENST00000361909 TMEM86BQ8N661 226 aa13.96□□□□□ -0.18
CMTM3-201ENST00000361909 IGLV1-40P01703 118 aa13.95□□□□□ -0.18
CMTM3-201ENST00000361909 CFHR3Q02985 330 aa13.95□□□□□ -0.18
CMTM3-201ENST00000361909 COPS9Q8WXC6 57 aa13.95□□□□□ -0.18
CMTM3-201ENST00000361909 ZNF469Q96JG9 3925 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-201ENST00000361909 FASNP49327 2511 aaKnown RBP13.94□□□□□ -0.18
CMTM3-201ENST00000361909 IGHV1OR15-1A0A075B7D0 117 aa13.93□□□□□ -0.18
CMTM3-201ENST00000361909 FAM236AA0A1B0GUQ0 79 aa13.93□□□□□ -0.18
CMTM3-201ENST00000361909 FAM236BA0A1B0GV22 79 aa13.93□□□□□ -0.18
CMTM3-201ENST00000361909 DCANP1Q8TF63 244 aa13.93□□□□□ -0.18
CMTM3-201ENST00000361909 TMEM89A2RUT3 159 aa13.93□□□□□ -0.18
CMTM3-201ENST00000361909 ADARB2-AS1A8MUL3 147 aa13.92□□□□□ -0.18
CMTM3-201ENST00000361909 UQCRQO14949 82 aa13.92□□□□□ -0.18
CMTM3-201ENST00000361909 CXCL5P42830 114 aa13.92□□□□□ -0.18
CMTM3-201ENST00000361909 TRAV8-3A0A0A6YYJ7 113 aa13.92□□□□□ -0.18
CMTM3-201ENST00000361909 C3orf22Q8N5N4 141 aa13.92□□□□□ -0.18
CMTM3-201ENST00000361909 DNAJC30Q96LL9 226 aa13.92□□□□□ -0.18
CMTM3-201ENST00000361909 SDIM1Q6ZPB5 146 aa13.91□□□□□ -0.18
CMTM3-201ENST00000361909 FLNAP21333 2647 aaKnown RBP13.91□□□□□ -0.18
CMTM3-201ENST00000361909 COX7A2LO14548 114 aa13.9□□□□□ -0.18
CMTM3-201ENST00000361909 CIRBPQ14011 172 aaKnown RBP13.9□□□□□ -0.18
CMTM3-201ENST00000361909 FAM104AQ969W3 186 aa13.9□□□□□ -0.18
CMTM3-201ENST00000361909 IGKV3-7A0A075B6H7 116 aa13.9□□□□□ -0.18
CMTM3-201ENST00000361909 NDUFA1O15239 70 aa13.9□□□□□ -0.18
CMTM3-201ENST00000361909 Q8N2B8 174 aa13.9□□□□□ -0.18
CMTM3-201ENST00000361909 RNF152Q8N8N0 203 aa13.9□□□□□ -0.18
CMTM3-201ENST00000361909 PF4V1P10720 104 aa13.89□□□□□ -0.19
CMTM3-201ENST00000361909 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
CMTM3-201ENST00000361909 TRACP01848 142 aa13.89□□□□□ -0.19
CMTM3-201ENST00000361909 C9orf153Q5TBE3 101 aa13.89□□□□□ -0.19
CMTM3-201ENST00000361909 MXRA5Q9NR99 2828 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 NDUFA7O95182 113 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 PSMB8P28062 276 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 LINC00526Q96FQ7 95 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 HECTD1Q9ULT8 2610 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 DAND5Q8N907 189 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 PPDPFQ9H3Y8 114 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 PEMTQ9UBM1 199 aa13.88□□□□□ -0.19
CMTM3-201ENST00000361909 SNRPD3P62318 126 aaKnown RBP13.87□□□□□ -0.19
CMTM3-201ENST00000361909 IGLV5-45A0A087WSX0 123 aa13.86□□□□□ -0.19
CMTM3-201ENST00000361909 FAM222AQ5U5X8 452 aa13.86□□□□□ -0.19
CMTM3-201ENST00000361909 PIK3CD-AS1Q5SR53 167 aa13.86□□□□□ -0.19
CMTM3-201ENST00000361909 AKAP9Q99996 3911 aa13.85□□□□□ -0.19
CMTM3-201ENST00000361909 IGHV3-11P01762 117 aa13.85□□□□□ -0.19
CMTM3-201ENST00000361909 INAFM2P0DMQ5 153 aa13.85□□□□□ -0.19
CMTM3-201ENST00000361909 TIRAPP58753 221 aa13.85□□□□□ -0.19
CMTM3-201ENST00000361909 UBE2D4Q9Y2X8 147 aa13.85□□□□□ -0.19
CMTM3-201ENST00000361909 A0A1B0GX51 115 aa13.85□□□□□ -0.19
CMTM3-201ENST00000361909 Q6ZSV7 163 aa13.84□□□□□ -0.19
CMTM3-201ENST00000361909 CITED2Q99967 270 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-201ENST00000361909 TLN2Q9Y4G6 2542 aa13.83□□□□□ -0.2
CMTM3-201ENST00000361909 NPC2P61916 151 aa13.83□□□□□ -0.2
CMTM3-201ENST00000361909 C5orf38Q86SI9 138 aa13.83□□□□□ -0.2
CMTM3-201ENST00000361909 DNAJC9-AS1A6NH13 148 aa13.82□□□□□ -0.2
CMTM3-201ENST00000361909 LINC00308Q8TCZ7 52 aa13.82□□□□□ -0.2
CMTM3-201ENST00000361909 DUX5Q96PT3 197 aa13.82□□□□□ -0.2
CMTM3-201ENST00000361909 SMCR5Q8TEV8 140 aa13.81□□□□□ -0.2
CMTM3-201ENST00000361909 CHCHD7Q9BUK0 85 aa13.81□□□□□ -0.2
CMTM3-201ENST00000361909 TRAV12-2A0A075B6T6 113 aa13.81□□□□□ -0.2
CMTM3-201ENST00000361909 MYO9AB2RTY4 2548 aa13.8□□□□□ -0.2
CMTM3-201ENST00000361909 J3KT08 172 aa13.8□□□□□ -0.2
CMTM3-201ENST00000361909 COX7CP15954 63 aa13.8□□□□□ -0.2
CMTM3-201ENST00000361909 K7EQG2 157 aa13.79□□□□□ -0.2
CMTM3-201ENST00000361909 ZNF415Q09FC8 603 aa13.79□□□□□ -0.2
CMTM3-201ENST00000361909 DAZ2Q13117 558 aaKnown RBP13.79□□□□□ -0.2
CMTM3-201ENST00000361909 BEAN1Q3B7T3 259 aa13.79□□□□□ -0.2
CMTM3-201ENST00000361909 DAZ4Q86SG3 579 aaKnown RBP13.79□□□□□ -0.2
CMTM3-201ENST00000361909 DAZ3Q9NR90 486 aaKnown RBP13.79□□□□□ -0.2
CMTM3-201ENST00000361909 ACANP16112 2415 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 IGLV5-39A0A0G2JS06 123 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 ATOX1O00244 68 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 SPINK13Q1W4C9 94 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 C10orf99Q6UWK7 81 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 UBE2E2Q96LR5 201 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 ESM1Q9NQ30 184 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 LY6G6DO95868 133 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 LINC00694P0DN24 101 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 CRYGAP11844 174 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 HERVK_113P63121 156 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 CEMP1Q6PRD7 247 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-201ENST00000361909 OVOL2Q9BRP0 275 aa13.78□□□□□ -0.2
CMTM3-201ENST00000361909 SONP18583 2426 aaKnown RBP13.77□□□□□ -0.2
CMTM3-201ENST00000361909 HIST1H4AP62805 103 aaKnown RBP13.77□□□□□ -0.21
CMTM3-201ENST00000361909 A8MZ25 164 aa13.76□□□□□ -0.21
CMTM3-201ENST00000361909 RNASE1P07998 156 aaKnown RBP13.76□□□□□ -0.21
CMTM3-201ENST00000361909 RPS28P62857 69 aaKnown RBP13.76□□□□□ -0.21
CMTM3-201ENST00000361909 CDKN2A-AS1Q9UH64 79 aa13.76□□□□□ -0.21
CMTM3-201ENST00000361909 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
CMTM3-201ENST00000361909 SMR3AQ99954 134 aa13.76□□□□□ -0.21
CMTM3-201ENST00000361909 PF4P02776 101 aa13.75□□□□□ -0.21
CMTM3-201ENST00000361909 BAALC-AS2P0C853 105 aa13.75□□□□□ -0.21
CMTM3-201ENST00000361909 RNASE13Q5GAN3 156 aaKnown RBP13.75□□□□□ -0.21
CMTM3-201ENST00000361909 CSDC2Q9Y534 153 aaKnown RBP13.75□□□□□ -0.21
CMTM3-201ENST00000361909 HILS1P60008 231 aa13.74□□□□□ -0.21
CMTM3-201ENST00000361909 C3orf56Q8N813 242 aa13.74□□□□□ -0.21
CMTM3-201ENST00000361909 IGKV3-20P01619 116 aa13.73□□□□□ -0.21
CMTM3-201ENST00000361909 Q9H8V8 135 aa13.73□□□□□ -0.21
CMTM3-201ENST00000361909 C5orf47Q569G3 176 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms