RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CRYGDP07320 174 aa10.32□□□□□ -0.76
COL6A1-201ENST00000361866 UBE2D1P51668 147 aa10.32□□□□□ -0.76
COL6A1-201ENST00000361866 OVOL2Q9BRP0 275 aa10.32□□□□□ -0.76
COL6A1-201ENST00000361866 ESM1Q9NQ30 184 aa10.32□□□□□ -0.76
COL6A1-201ENST00000361866 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
COL6A1-201ENST00000361866 J3KT08 172 aa10.32□□□□□ -0.76
COL6A1-201ENST00000361866 PRORYQ9H606 182 aa10.32□□□□□ -0.76
COL6A1-201ENST00000361866 PIK3CD-AS1Q5SR53 167 aa10.31□□□□□ -0.76
COL6A1-201ENST00000361866 DNAJC30Q96LL9 226 aa10.31□□□□□ -0.76
COL6A1-201ENST00000361866 LECT2O14960 151 aa10.31□□□□□ -0.76
COL6A1-201ENST00000361866 TSHBP01222 138 aa10.31□□□□□ -0.76
COL6A1-201ENST00000361866 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
COL6A1-201ENST00000361866 CRLF1O75462 422 aa10.3□□□□□ -0.76
COL6A1-201ENST00000361866 PSMG3-AS1Q96PY0 264 aa10.3□□□□□ -0.76
COL6A1-201ENST00000361866 REV3LO60673 3130 aa10.3□□□□□ -0.76
COL6A1-201ENST00000361866 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
COL6A1-201ENST00000361866 KLLNB2CW77 178 aa10.3□□□□□ -0.76
COL6A1-201ENST00000361866 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
COL6A1-201ENST00000361866 Q6ZTI0 123 aa10.29□□□□□ -0.76
COL6A1-201ENST00000361866 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
COL6A1-201ENST00000361866 A0A1B0GX51 115 aa10.28□□□□□ -0.76
COL6A1-201ENST00000361866 K7EQD1 137 aa10.28□□□□□ -0.76
COL6A1-201ENST00000361866 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
COL6A1-201ENST00000361866 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
COL6A1-201ENST00000361866 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
COL6A1-201ENST00000361866 CCL24O00175 119 aa10.28□□□□□ -0.76
COL6A1-201ENST00000361866 C14orf132Q9NPU4 83 aa10.28□□□□□ -0.76
COL6A1-201ENST00000361866 HIST2H2BCQ6DN03 193 aa10.27□□□□□ -0.76
COL6A1-201ENST00000361866 UBL5Q9BZL1 73 aa10.27□□□□□ -0.76
COL6A1-201ENST00000361866 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.77
COL6A1-201ENST00000361866 ACYP1P07311 99 aa10.27□□□□□ -0.77
COL6A1-201ENST00000361866 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
COL6A1-201ENST00000361866 DCANP1Q8TF63 244 aa10.27□□□□□ -0.77
COL6A1-201ENST00000361866 F5H768 121 aa10.27□□□□□ -0.77
COL6A1-201ENST00000361866 TRBV30A0A0K0K1B3 111 aa10.26□□□□□ -0.77
COL6A1-201ENST00000361866 COX7B2Q8TF08 81 aa10.26□□□□□ -0.77
COL6A1-201ENST00000361866 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
COL6A1-201ENST00000361866 LINC00308Q8TCZ7 52 aa10.26□□□□□ -0.77
COL6A1-201ENST00000361866 TMEM263Q8WUH6 116 aaKnown RBP10.26□□□□□ -0.77
COL6A1-201ENST00000361866 SPTBN5Q9NRC6 3674 aaKnown RBP10.26□□□□□ -0.77
COL6A1-201ENST00000361866 UBE2D3P61077 147 aa10.26□□□□□ -0.77
COL6A1-201ENST00000361866 UBE2D2P62837 147 aa10.26□□□□□ -0.77
COL6A1-201ENST00000361866 ADGRG4Q8IZF6 3080 aa10.26□□□□□ -0.77
COL6A1-201ENST00000361866 MAP6D1Q9H9H5 199 aa10.25□□□□□ -0.77
COL6A1-201ENST00000361866 NDUFA7O95182 113 aa10.25□□□□□ -0.77
COL6A1-201ENST00000361866 CMC4P56277 68 aaPredicted RBP10.25□□□□□ -0.77
COL6A1-201ENST00000361866 SHISA2Q6UWI4 295 aa10.25□□□□□ -0.77
COL6A1-201ENST00000361866 J3QLI3 93 aa10.25□□□□□ -0.77
COL6A1-201ENST00000361866 FLNBO75369 2602 aaKnown RBP10.24□□□□□ -0.77
COL6A1-201ENST00000361866 COX7A2LO14548 114 aa10.24□□□□□ -0.77
COL6A1-201ENST00000361866 DEFB113Q30KQ7 82 aa10.24□□□□□ -0.77
COL6A1-201ENST00000361866 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
COL6A1-201ENST00000361866 AVPP01185 164 aa10.24□□□□□ -0.77
COL6A1-201ENST00000361866 SLPIP03973 132 aa10.23□□□□□ -0.77
COL6A1-201ENST00000361866 C18orf65Q6ZTR6 163 aa10.23□□□□□ -0.77
COL6A1-201ENST00000361866 SPANXDQ9BXN6 97 aa10.23□□□□□ -0.77
COL6A1-201ENST00000361866 H7C423 109 aa10.23□□□□□ -0.77
COL6A1-201ENST00000361866 GYPEP15421 78 aa10.23□□□□□ -0.77
COL6A1-201ENST00000361866 SDIM1Q6ZPB5 146 aa10.23□□□□□ -0.77
COL6A1-201ENST00000361866 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
COL6A1-201ENST00000361866 C9orf85Q96MD7 179 aa10.23□□□□□ -0.77
COL6A1-201ENST00000361866 M0QXV9 152 aa10.22□□□□□ -0.77
COL6A1-201ENST00000361866 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
COL6A1-201ENST00000361866 MUC4Q99102 2169 aa10.22□□□□□ -0.77
COL6A1-201ENST00000361866 DEFB4AO15263 64 aa10.22□□□□□ -0.77
COL6A1-201ENST00000361866 ADAMTSL4-AS1Q5T5F5 129 aa10.22□□□□□ -0.77
COL6A1-201ENST00000361866 MRAPQ8TCY5 172 aa10.22□□□□□ -0.77
COL6A1-201ENST00000361866 RBM3P98179 157 aaKnown RBP10.22□□□□□ -0.77
COL6A1-201ENST00000361866 LINC00643Q86TS7 51 aa10.22□□□□□ -0.77
COL6A1-201ENST00000361866 KALRNO60229 2985 aa10.21□□□□□ -0.77
COL6A1-201ENST00000361866 ATOX1O00244 68 aa10.21□□□□□ -0.77
COL6A1-201ENST00000361866 C5orf47Q569G3 176 aa10.21□□□□□ -0.78
COL6A1-201ENST00000361866 PSMB8P28062 276 aa10.21□□□□□ -0.78
COL6A1-201ENST00000361866 DAD1P61803 113 aa10.2□□□□□ -0.78
COL6A1-201ENST00000361866 H0YGX0 51 aa10.2□□□□□ -0.78
COL6A1-201ENST00000361866 LST1O00453 97 aa10.2□□□□□ -0.78
COL6A1-201ENST00000361866 ODF3Q96PU9 254 aa10.2□□□□□ -0.78
COL6A1-201ENST00000361866 RBMY1FQ15415 496 aaKnown RBP10.19□□□□□ -0.78
COL6A1-201ENST00000361866 TRAV25A0A0B4J276 109 aa10.19□□□□□ -0.78
COL6A1-201ENST00000361866 RNF152Q8N8N0 203 aa10.19□□□□□ -0.78
COL6A1-201ENST00000361866 UBE2D4Q9Y2X8 147 aa10.19□□□□□ -0.78
COL6A1-201ENST00000361866 PYGO1Q9Y3Y4 419 aa10.19□□□□□ -0.78
COL6A1-201ENST00000361866 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
COL6A1-201ENST00000361866 PRO0461Q9UI25 63 aa10.18□□□□□ -0.78
COL6A1-201ENST00000361866 UQCRQO14949 82 aa10.18□□□□□ -0.78
COL6A1-201ENST00000361866 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
COL6A1-201ENST00000361866 NDUFA1O15239 70 aa10.17□□□□□ -0.78
COL6A1-201ENST00000361866 IGLV1-40P01703 118 aa10.17□□□□□ -0.78
COL6A1-201ENST00000361866 hADV29S1A0JD25 119 aa10.17□□□□□ -0.78
COL6A1-201ENST00000361866 WFDC11Q8NEX6 87 aa10.17□□□□□ -0.78
COL6A1-201ENST00000361866 DSCR8Q96T75 97 aa10.17□□□□□ -0.78
COL6A1-201ENST00000361866 GHRHP01286 108 aa10.17□□□□□ -0.78
COL6A1-201ENST00000361866 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
COL6A1-201ENST00000361866 NCR3O14931 201 aa10.16□□□□□ -0.78
COL6A1-201ENST00000361866 DEFB114Q30KQ6 69 aa10.16□□□□□ -0.78
COL6A1-201ENST00000361866 SPANXCQ9NY87 97 aa10.16□□□□□ -0.78
COL6A1-201ENST00000361866 DPH3Q96FX2 82 aa10.15□□□□□ -0.78
COL6A1-201ENST00000361866 KIF25-AS1Q9Y6Z4 181 aa10.15□□□□□ -0.78
COL6A1-201ENST00000361866 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
COL6A1-201ENST00000361866 LOC100131303A0A0U1RQF7 123 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms