RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 REG3AQ06141 175 aa9.27□□□□□ -0.93
NSMCE1-201ENST00000361439 ENHOQ6UWT2 76 aa9.27□□□□□ -0.93
NSMCE1-201ENST00000361439 Q6ZRN7 208 aaPredicted RBP9.27□□□□□ -0.93
NSMCE1-201ENST00000361439 ZNF664Q8N3J9 261 aa9.27□□□□□ -0.93
NSMCE1-201ENST00000361439 CDC42SE2Q9NRR3 84 aa9.27□□□□□ -0.93
NSMCE1-201ENST00000361439 AP5S1Q9NUS5 200 aa9.27□□□□□ -0.93
NSMCE1-201ENST00000361439 CYSLTR1Q9Y271 337 aa9.27□□□□□ -0.93
NSMCE1-201ENST00000361439 CCL25O15444 150 aa9.26□□□□□ -0.93
NSMCE1-201ENST00000361439 LINC00614P0C842 121 aa9.26□□□□□ -0.93
NSMCE1-201ENST00000361439 RPL39P62891 51 aaKnown RBP9.25□□□□□ -0.93
NSMCE1-201ENST00000361439 C2orf66Q6UXQ4 117 aa9.25□□□□□ -0.93
NSMCE1-201ENST00000361439 TOMM6Q96B49 74 aa9.25□□□□□ -0.93
NSMCE1-201ENST00000361439 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
NSMCE1-201ENST00000361439 Q9HAA7 133 aa9.25□□□□□ -0.93
NSMCE1-201ENST00000361439 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
NSMCE1-201ENST00000361439 CHCHD1Q96BP2 118 aaKnown RBP9.24□□□□□ -0.93
NSMCE1-201ENST00000361439 PSCAO43653 123 aa9.23□□□□□ -0.93
NSMCE1-201ENST00000361439 TIMM17AQ99595 171 aa9.23□□□□□ -0.93
NSMCE1-201ENST00000361439 DNAH10Q8IVF4 4471 aa9.22□□□□□ -0.93
NSMCE1-201ENST00000361439 IGKV2D-24A0A075B6R9 120 aa9.22□□□□□ -0.93
NSMCE1-201ENST00000361439 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
NSMCE1-201ENST00000361439 ERASQ7Z444 233 aa9.22□□□□□ -0.93
NSMCE1-201ENST00000361439 IGIPA6NJ69 53 aa9.21□□□□□ -0.94
NSMCE1-201ENST00000361439 C1orf196B1AJZ1 125 aa9.21□□□□□ -0.94
NSMCE1-201ENST00000361439 BAGE3Q86Y29 109 aa9.21□□□□□ -0.94
NSMCE1-201ENST00000361439 URB1-AS1Q96HZ7 61 aa9.21□□□□□ -0.94
NSMCE1-201ENST00000361439 TMEM141Q96I45 108 aa9.21□□□□□ -0.94
NSMCE1-201ENST00000361439 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.94
NSMCE1-201ENST00000361439 IGLV4-3A0A075B6K6 122 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 LINC00959A0A1B0GUT2 108 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 EREGO14944 169 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 HBDP02042 147 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 SS18Q15532 418 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 CLPSL2Q6UWE3 100 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 Q6ZN92 141 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 Q6ZUT4 128 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 FAM104AQ969W3 186 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 DNAH17Q9UFH2 4485 aa9.2□□□□□ -0.94
NSMCE1-201ENST00000361439 SCGB3A1Q96QR1 104 aa9.19□□□□□ -0.94
NSMCE1-201ENST00000361439 FAT2Q9NYQ8 4349 aa9.19□□□□□ -0.94
NSMCE1-201ENST00000361439 TNP2Q05952 138 aa9.18□□□□□ -0.94
NSMCE1-201ENST00000361439 KRTAP26-1Q6PEX3 210 aa9.18□□□□□ -0.94
NSMCE1-201ENST00000361439 TEX43Q6ZNM6 134 aa9.18□□□□□ -0.94
NSMCE1-201ENST00000361439 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-201ENST00000361439 AMELXQ99217 191 aa9.18□□□□□ -0.94
NSMCE1-201ENST00000361439 C2orf88Q9BSF0 95 aa9.18□□□□□ -0.94
NSMCE1-201ENST00000361439 VCX2Q9H322 139 aa9.18□□□□□ -0.94
NSMCE1-201ENST00000361439 IGLV10-54A0A075B6I4 117 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 A0A087WTM6 91 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BKO60814 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BJP06899 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BOP23527 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BBP33778 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BDP58876 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BCP62807 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST2H2BEQ16778 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BHQ93079 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BNQ99877 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 HIST1H2BMQ99879 126 aa9.17□□□□□ -0.94
NSMCE1-201ENST00000361439 A0A096LNJ9 63 aa9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 IFITM10A6NMD0 228 aa9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 HSBP1O75506 76 aa9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 ATP5LO75964 103 aa9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 C14orf177Q52M58 125 aa9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 PDZD11Q5EBL8 140 aa9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 OPRPNQ99935 248 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-201ENST00000361439 TRAV13-1A0A0B4J241 112 aa9.15□□□□□ -0.94
NSMCE1-201ENST00000361439 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.94
NSMCE1-201ENST00000361439 FAM19A3Q7Z5A8 133 aa9.15□□□□□ -0.94
NSMCE1-201ENST00000361439 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
NSMCE1-201ENST00000361439 GAGE12HA6NDE8 117 aa9.14□□□□□ -0.95
NSMCE1-201ENST00000361439 SERF1AO75920 110 aa9.14□□□□□ -0.95
NSMCE1-201ENST00000361439 XCL1P47992 114 aa9.14□□□□□ -0.95
NSMCE1-201ENST00000361439 SEC11AP67812 179 aa9.14□□□□□ -0.95
NSMCE1-201ENST00000361439 FOXI1Q12951 378 aa9.14□□□□□ -0.95
NSMCE1-201ENST00000361439 CFAP161Q6P656 301 aa9.14□□□□□ -0.95
NSMCE1-201ENST00000361439 UBE2D1P51668 147 aa9.13□□□□□ -0.95
NSMCE1-201ENST00000361439 PMCHL1Q16048 86 aa9.13□□□□□ -0.95
NSMCE1-201ENST00000361439 LINC00173Q6ZV60 143 aa9.13□□□□□ -0.95
NSMCE1-201ENST00000361439 NTN5Q8WTR8 489 aaPredicted RBP9.13□□□□□ -0.95
NSMCE1-201ENST00000361439 BAALCQ8WXS3 180 aa9.13□□□□□ -0.95
NSMCE1-201ENST00000361439 LINC00310P59036 64 aa9.12□□□□□ -0.95
NSMCE1-201ENST00000361439 PMVKQ15126 192 aa9.12□□□□□ -0.95
NSMCE1-201ENST00000361439 COA6Q5JTJ3 125 aaKnown RBP9.12□□□□□ -0.95
NSMCE1-201ENST00000361439 CDPF1Q6NVV7 123 aa9.12□□□□□ -0.95
NSMCE1-201ENST00000361439 Q8N814 137 aa9.12□□□□□ -0.95
NSMCE1-201ENST00000361439 CST9LQ9H4G1 147 aa9.12□□□□□ -0.95
NSMCE1-201ENST00000361439 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
NSMCE1-201ENST00000361439 IGHV3OR16-9A0A0B4J2B5 98 aa9.11□□□□□ -0.95
NSMCE1-201ENST00000361439 LINC00242Q5T6M2 205 aa9.11□□□□□ -0.95
NSMCE1-201ENST00000361439 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
NSMCE1-201ENST00000361439 COX7A2LO14548 114 aa9.1□□□□□ -0.95
NSMCE1-201ENST00000361439 HERVK_113P63121 156 aa9.1□□□□□ -0.95
NSMCE1-201ENST00000361439 PACRGQ96M98 296 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms