RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 H3BMG7 143 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 LEPROTO15243 131 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 CFAP126Q5VTH2 177 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 PRO0461Q9UI25 63 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 MTORP42345 2549 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 ZNF22P17026 224 aaPredicted RBP5.25□□□□□ -1.57
CLCN3-202ENST00000360642 CRYBA4P53673 196 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 MTURNQ8N3F0 131 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 Q9UF83 564 aa5.25□□□□□ -1.57
CLCN3-202ENST00000360642 SLPIP03973 132 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 RPL35AP18077 110 aaKnown RBP5.24□□□□□ -1.57
CLCN3-202ENST00000360642 WFDC2Q14508 124 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 NACAE9PAV3 2078 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 TEX48A0A1B0GUV7 120 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 CD28P10747 220 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 MRPS36P82909 103 aaKnown RBP5.24□□□□□ -1.57
CLCN3-202ENST00000360642 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 SFTA2Q6UW10 78 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 NDUFA11Q86Y39 141 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 JMJD1CQ15652 2540 aa5.24□□□□□ -1.57
CLCN3-202ENST00000360642 A0A0J9YXV3 536 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 TSPAN13O95857 204 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 LGALS3P17931 250 aaKnown RBP5.23□□□□□ -1.57
CLCN3-202ENST00000360642 UBE2D3P61077 147 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 UBE2D2P62837 147 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 DYNLRB2Q8TF09 96 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 CHCHD7Q9BUK0 85 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 MRPL16Q9NX20 251 aaKnown RBP5.23□□□□□ -1.57
CLCN3-202ENST00000360642 TNFRSF18Q9Y5U5 241 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 C2CD3Q4AC94 2353 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 CFC1BP0CG36 223 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 CFC1P0CG37 223 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 LINC01587Q99440 93 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 A0A087WZ39 114 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 TRAV25A0A0B4J276 109 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 IGHV3-53P01767 116 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 CD164L2Q6UWJ8 174 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 ITPR3Q14573 2671 aa5.23□□□□□ -1.57
CLCN3-202ENST00000360642 HELZ2Q9BYK8 2649 aaKnown RBP5.22□□□□□ -1.57
CLCN3-202ENST00000360642 RS1O15537 224 aa5.22□□□□□ -1.57
CLCN3-202ENST00000360642 INSP01308 110 aa5.22□□□□□ -1.57
CLCN3-202ENST00000360642 LINC01620Q4KN68 170 aa5.22□□□□□ -1.57
CLCN3-202ENST00000360642 DNAJC30Q96LL9 226 aa5.22□□□□□ -1.57
CLCN3-202ENST00000360642 UBE2D4Q9Y2X8 147 aa5.22□□□□□ -1.57
CLCN3-202ENST00000360642 FLNAP21333 2647 aaKnown RBP5.22□□□□□ -1.57
CLCN3-202ENST00000360642 DNAJC9-AS1A6NH13 148 aa5.22□□□□□ -1.57
CLCN3-202ENST00000360642 CEMP1Q6PRD7 247 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-202ENST00000360642 IGHV3-64A0A075B6Q5 118 aa5.21□□□□□ -1.57
CLCN3-202ENST00000360642 APOMO95445 188 aa5.21□□□□□ -1.57
CLCN3-202ENST00000360642 C10orf126Q8N4M7 172 aa5.21□□□□□ -1.57
CLCN3-202ENST00000360642 TEX29Q8N6K0 151 aa5.21□□□□□ -1.57
CLCN3-202ENST00000360642 WFDC11Q8NEX6 87 aa5.21□□□□□ -1.57
CLCN3-202ENST00000360642 SPANXA1Q9NS26 97 aa5.21□□□□□ -1.57
CLCN3-202ENST00000360642 AZU1P20160 251 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 OVOL2Q9BRP0 275 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 ESM1Q9NQ30 184 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 FASNP49327 2511 aaKnown RBP5.21□□□□□ -1.58
CLCN3-202ENST00000360642 TENM4Q6N022 2769 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 GAGE7O76087 117 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 GAGE12FP0CL80 117 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 GAGE12GP0CL81 117 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 GAGE12IP0CL82 117 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 IGHV3-30-3P0DP02 117 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 GAGE4Q13068 117 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 SH2D6Q7Z4S9 175 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 C1orf158Q8N1D5 194 aa5.21□□□□□ -1.58
CLCN3-202ENST00000360642 TINCRA0A1B0GVN0 87 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 ETDBQ3ZM63 59 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 RNASE13Q5GAN3 156 aaKnown RBP5.2□□□□□ -1.58
CLCN3-202ENST00000360642 PRO1854Q9UHT4 67 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 IGHV1-58A0A0C4DH39 117 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 A0A0J9YXY3 114 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 LITAFQ99732 161 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 XCL2Q9UBD3 114 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 NOTCH2Q04721 2471 aa5.2□□□□□ -1.58
CLCN3-202ENST00000360642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-202ENST00000360642 IGKV2-29A2NJV5 120 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-202ENST00000360642 TMEM263Q8WUH6 116 aaKnown RBP5.19□□□□□ -1.58
CLCN3-202ENST00000360642 TIMM21Q9BVV7 248 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 LOC107984156A0A0G2JMH3 177 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 TMEM238C9JI98 176 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-202ENST00000360642 MUSTN1Q8IVN3 82 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 ARL17AQ8IVW1 177 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 TRAV8-3A0A0A6YYJ7 113 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 A0A0B4J2C4 111 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 IGHV3-38A0A0C4DH36 116 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 TCL1BO95988 128 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 PSMB2P49721 201 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 SEC61GP60059 68 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 KRTAP1-1Q07627 177 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 VSIG2Q96IQ7 327 aa5.19□□□□□ -1.58
CLCN3-202ENST00000360642 TRBV20-1A0A075B6N2 111 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 COTL1Q14019 142 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 Q6ZUT4 128 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 Q6ZVQ6 151 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 SBSPONQ8IVN8 264 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 ITPR2Q14571 2701 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 IGHV3-33P01772 117 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms