RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 IFNA1P01562 189 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 MRPL54Q6P161 138 aaKnown RBP3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 LYZL2Q7Z4W2 148 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 MGST2Q99735 147 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 NDFIP1Q9BT67 221 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 MRPL18Q9H0U6 180 aaKnown RBP3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 SLC39A9Q9NUM3 307 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 LOC100131303A0A0U1RQF7 123 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 TMEM250H0YL14 139 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 C5orf47Q569G3 176 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 TMEM97Q5BJF2 176 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 MBD3L1Q8WWY6 194 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 WDR83OSQ9Y284 106 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 H3BUT2 72 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 GNG4P50150 75 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 SLC25A34Q6PIV7 304 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 OR5C1Q8NGR4 320 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 C7orf33Q8WU49 177 aa3.67□□□□□ -1.82
CDC42SE2-201ENST00000360515 H3BRM9 83 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 OR10AG1Q8NH19 301 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 SEC11AP67812 179 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 ZNF726P1Q15940 193 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 OR10J3Q5JRS4 329 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 C10orf113Q5VZT2 155 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 FA2HQ7L5A8 372 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 A8MWV9 139 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 USP17L23D6RBM5 183 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 RNASE4P34096 147 aaKnown RBP3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 LINC01620Q4KN68 170 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 FAM19A2Q8N3H0 131 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 TMEM252Q8N6L7 170 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 ANAPC13Q9BS18 74 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 WDR61Q9GZS3 305 aaKnown RBP3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 SPCS1Q9Y6A9 102 aa3.66□□□□□ -1.82
CDC42SE2-201ENST00000360515 A0A087WYN8 130 aa3.65□□□□□ -1.82
CDC42SE2-201ENST00000360515 TRAV8-4A0A0B4J246 113 aa3.65□□□□□ -1.82
CDC42SE2-201ENST00000360515 P01737 135 aa3.65□□□□□ -1.82
CDC42SE2-201ENST00000360515 TMEM78Q5T7P6 136 aa3.65□□□□□ -1.82
CDC42SE2-201ENST00000360515 NAA38Q9BRA0 125 aaKnown RBP3.65□□□□□ -1.82
CDC42SE2-201ENST00000360515 SLC25A2Q9BXI2 301 aa3.65□□□□□ -1.82
CDC42SE2-201ENST00000360515 RHODO00212 210 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGHV3-53P01767 116 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 SPINK8P0C7L1 97 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 NTF3P20783 257 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 UBE2D3P61077 147 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 UBE2D2P62837 147 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 GCSAMLQ5JQS6 135 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 DAZ4Q86SG3 579 aaKnown RBP3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 TSKUQ8WUA8 353 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 PPDPFQ9H3Y8 114 aa3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 DAZ3Q9NR90 486 aaKnown RBP3.65□□□□□ -1.83
CDC42SE2-201ENST00000360515 CST7O76096 145 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGHV3-30P01768 117 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGHV3-33P01772 117 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGHV3-30-3P0DP02 117 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGHV3-30-5P0DP03 117 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 FXYD5Q96DB9 178 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 Q9HAA7 133 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 CYSLTR1Q9Y271 337 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 TRAV21A0A0B4J279 112 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 A0A1W2PPM0 123 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 A6NDN8 102 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 ERCC8Q13216 396 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 TPRXLQ17RH7 258 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 Q6ZRP5 223 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 C18orf32Q8TCD1 76 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 TPPP3Q9BW30 176 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 ARL2-SNX15V9GYD0 113 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 TRAV9-1A0A075B6T8 112 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 A0A087WX48 190 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 SLPIP03973 132 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 UBE2G1P62253 170 aa3.64□□□□□ -1.83
CDC42SE2-201ENST00000360515 COX7A2P2O60397 106 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 hDV102S1A0JD36 115 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 FABP2P12104 132 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 GNB1LQ9BYB4 327 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 CSDC2Q9Y534 153 aaKnown RBP3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 SSSCA1O60232 199 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 MT-ATP8P03928 68 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 HTN1P15515 57 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 Q8N3U1 123 aa3.63□□□□□ -1.83
CDC42SE2-201ENST00000360515 LCE2CQ5TA81 110 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 FAM159AQ6UWV7 190 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 Q6ZQT7 251 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 RAB37Q96AX2 223 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 NAT8BQ9UHF3 227 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 TRBV6-1A0A0K0K1D8 114 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 GAGE12JA6NER3 117 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 SERF2P84101 59 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 GAGE4Q13068 117 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 C2orf91Q6ZV80 131 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 SCGB1C1Q8TD33 95 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 C1orf43Q9BWL3 253 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms