RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 K7EMT4 169 aa13.12□□□□□ -0.31
PTPA-206ENST00000358994 LY6EQ16553 131 aa13.12□□□□□ -0.31
PTPA-206ENST00000358994 BRD3OSQ6XYD6 125 aa13.12□□□□□ -0.31
PTPA-206ENST00000358994 ATOX1O00244 68 aa13.11□□□□□ -0.31
PTPA-206ENST00000358994 HTN1P15515 57 aa13.11□□□□□ -0.31
PTPA-206ENST00000358994 RPS28P62857 69 aaKnown RBP13.11□□□□□ -0.31
PTPA-206ENST00000358994 FAM222AQ5U5X8 452 aa13.11□□□□□ -0.31
PTPA-206ENST00000358994 A0A1W2PPR1 153 aa13.11□□□□□ -0.31
PTPA-206ENST00000358994 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
PTPA-206ENST00000358994 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
PTPA-206ENST00000358994 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
PTPA-206ENST00000358994 IGHV3-38A0A0C4DH36 116 aa13.1□□□□□ -0.31
PTPA-206ENST00000358994 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
PTPA-206ENST00000358994 Q9HAA7 133 aa13.1□□□□□ -0.31
PTPA-206ENST00000358994 BLCAPP62952 87 aa13.1□□□□□ -0.31
PTPA-206ENST00000358994 BPESC1Q9GZL8 116 aa13.1□□□□□ -0.31
PTPA-206ENST00000358994 IGLV5-39A0A0G2JS06 123 aa13.09□□□□□ -0.31
PTPA-206ENST00000358994 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
PTPA-206ENST00000358994 IGLV1-40P01703 118 aa13.08□□□□□ -0.31
PTPA-206ENST00000358994 PRM2P04554 102 aa13.08□□□□□ -0.31
PTPA-206ENST00000358994 ABCA2Q9BZC7 2435 aa13.08□□□□□ -0.32
PTPA-206ENST00000358994 TRAV13-1A0A0B4J241 112 aa13.08□□□□□ -0.32
PTPA-206ENST00000358994 K7EQG2 157 aa13.07□□□□□ -0.32
PTPA-206ENST00000358994 RS1O15537 224 aa13.07□□□□□ -0.32
PTPA-206ENST00000358994 MALP21145 153 aa13.07□□□□□ -0.32
PTPA-206ENST00000358994 IGHV3OR16-12A0A075B7B8 117 aa13.06□□□□□ -0.32
PTPA-206ENST00000358994 KIR2DL5BQ8NHK3 375 aa13.06□□□□□ -0.32
PTPA-206ENST00000358994 HOXD3P31249 432 aaPredicted RBP13.06□□□□□ -0.32
PTPA-206ENST00000358994 RPL18AQ02543 176 aaKnown RBP13.06□□□□□ -0.32
PTPA-206ENST00000358994 C9orf129Q5T035 196 aaKnown RBP13.06□□□□□ -0.32
PTPA-206ENST00000358994 LINC00242Q5T6M2 205 aa13.06□□□□□ -0.32
PTPA-206ENST00000358994 KLRB1Q12918 225 aa13.05□□□□□ -0.32
PTPA-206ENST00000358994 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
PTPA-206ENST00000358994 ADORA2A-AS1P86434 159 aa13.05□□□□□ -0.32
PTPA-206ENST00000358994 PIK3CD-AS1Q5SR53 167 aa13.05□□□□□ -0.32
PTPA-206ENST00000358994 OR13C6PQ8NH95 151 aa13.05□□□□□ -0.32
PTPA-206ENST00000358994 COPS9Q8WXC6 57 aa13.05□□□□□ -0.32
PTPA-206ENST00000358994 SMIM1B2RUZ4 78 aa13.04□□□□□ -0.32
PTPA-206ENST00000358994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.04□□□□□ -0.324e-6■■■□□ 15.2
PTPA-206ENST00000358994 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
PTPA-206ENST00000358994 PRORYQ9H606 182 aa13.04□□□□□ -0.32
PTPA-206ENST00000358994 IGKV3D-7A0A0C4DH55 119 aa13.03□□□□□ -0.32
PTPA-206ENST00000358994 H3BUX3 64 aa13.03□□□□□ -0.32
PTPA-206ENST00000358994 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
PTPA-206ENST00000358994 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
PTPA-206ENST00000358994 DGAT2L7PQ6IED9 249 aa13.03□□□□□ -0.32
PTPA-206ENST00000358994 RNF152Q8N8N0 203 aa13.03□□□□□ -0.32
PTPA-206ENST00000358994 UPK3BQ9BT76 320 aa13.02□□□□□ -0.32
PTPA-206ENST00000358994 VPS13CQ709C8 3753 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 CFHR3Q02985 330 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 C14orf132Q9NPU4 83 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 ZNF462Q96JM2 2506 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 A0A087WVE0 104 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 A6NDX4 124 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 DNAL4O96015 105 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 OXTP01178 125 aa13.01□□□□□ -0.33
PTPA-206ENST00000358994 RPL28P46779 137 aaKnown RBP13□□□□□ -0.33
PTPA-206ENST00000358994 TMEM258P61165 79 aa13□□□□□ -0.33
PTPA-206ENST00000358994 SERP2Q8N6R1 65 aa13□□□□□ -0.33
PTPA-206ENST00000358994 LINC00846Q9NV44 126 aa13□□□□□ -0.33
PTPA-206ENST00000358994 IGHV4-38-2P0DP08 117 aa12.99□□□□□ -0.33
PTPA-206ENST00000358994 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
PTPA-206ENST00000358994 PIMREGQ9BSJ6 248 aa12.99□□□□□ -0.33
PTPA-206ENST00000358994 PRB1P04280 392 aa12.99□□□□□ -0.33
PTPA-206ENST00000358994 ZNF415Q09FC8 603 aa12.99□□□□□ -0.33
PTPA-206ENST00000358994 FAM208BQ5VWN6 2430 aa12.99□□□□□ -0.33
PTPA-206ENST00000358994 A0A087WYN8 130 aa12.98□□□□□ -0.33
PTPA-206ENST00000358994 Q6JHZ5 121 aa12.98□□□□□ -0.33
PTPA-206ENST00000358994 DSCR8Q96T75 97 aa12.98□□□□□ -0.33
PTPA-206ENST00000358994 IGHV3-53P01767 116 aa12.98□□□□□ -0.33
PTPA-206ENST00000358994 LINC01561Q8N1V8 128 aa12.98□□□□□ -0.33
PTPA-206ENST00000358994 WIPF1O43516 503 aa12.97□□□□□ -0.33
PTPA-206ENST00000358994 LINC00337Q8N6G1 96 aa12.97□□□□□ -0.33
PTPA-206ENST00000358994 C10orf99Q6UWK7 81 aa12.97□□□□□ -0.33
PTPA-206ENST00000358994 FLNCQ14315 2725 aa12.97□□□□□ -0.33
PTPA-206ENST00000358994 FASNP49327 2511 aaKnown RBP12.97□□□□□ -0.33
PTPA-206ENST00000358994 K7ENP7 123 aa12.96□□□□□ -0.33
PTPA-206ENST00000358994 TRAV13-2A0A0B4J235 113 aa12.96□□□□□ -0.33
PTPA-206ENST00000358994 F5H768 121 aa12.96□□□□□ -0.33
PTPA-206ENST00000358994 KMT2BQ9UMN6 2715 aaPredicted RBP12.96□□□□□ -0.33
PTPA-206ENST00000358994 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.33
PTPA-206ENST00000358994 UTP20O75691 2785 aaKnown RBP12.96□□□□□ -0.34
PTPA-206ENST00000358994 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.34
PTPA-206ENST00000358994 CREBBPQ92793 2442 aa12.95□□□□□ -0.34
PTPA-206ENST00000358994 PF4P02776 101 aa12.95□□□□□ -0.34
PTPA-206ENST00000358994 PSMB8P28062 276 aa12.95□□□□□ -0.34
PTPA-206ENST00000358994 OBSCN-AS1Q96MR7 158 aa12.95□□□□□ -0.34
PTPA-206ENST00000358994 IGKV2-28A0A075B6P5 120 aa12.95□□□□□ -0.34
PTPA-206ENST00000358994 IGKV2D-28P01615 120 aa12.95□□□□□ -0.34
PTPA-206ENST00000358994 CRPP02741 224 aa12.95□□□□□ -0.34
PTPA-206ENST00000358994 USP17L23D6RBM5 183 aa12.94□□□□□ -0.34
PTPA-206ENST00000358994 RBMY1BA6NDE4 496 aaKnown RBP12.93□□□□□ -0.34
PTPA-206ENST00000358994 RBMY1EA6NEQ0 496 aaKnown RBP12.93□□□□□ -0.34
PTPA-206ENST00000358994 RBMY1DP0C7P1 496 aaKnown RBP12.93□□□□□ -0.34
PTPA-206ENST00000358994 CRYBG3Q68DQ2 2970 aa12.93□□□□□ -0.34
PTPA-206ENST00000358994 SMIM11BQ8TCY0 68 aa12.93□□□□□ -0.34
PTPA-206ENST00000358994 Q96MF0 132 aa12.93□□□□□ -0.34
PTPA-206ENST00000358994 BBC3Q96PG8 261 aaPredicted RBP12.93□□□□□ -0.34
PTPA-206ENST00000358994 TRAV25A0A0B4J276 109 aa12.92□□□□□ -0.34
PTPA-206ENST00000358994 C4orf26Q17RF5 130 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms