RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TRAV2A0A0B4J234 112 aa9.22□□□□□ -0.93
GGPS1-202ENST00000358966 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
GGPS1-202ENST00000358966 SLC25A20O43772 301 aa9.22□□□□□ -0.93
GGPS1-202ENST00000358966 C4orf26Q17RF5 130 aa9.22□□□□□ -0.93
GGPS1-202ENST00000358966 LYRM7Q5U5X0 104 aa9.22□□□□□ -0.93
GGPS1-202ENST00000358966 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.93
GGPS1-202ENST00000358966 DPM2O94777 84 aa9.21□□□□□ -0.93
GGPS1-202ENST00000358966 IGLV1-51P01701 117 aa9.21□□□□□ -0.93
GGPS1-202ENST00000358966 RPL35AP18077 110 aaKnown RBP9.21□□□□□ -0.93
GGPS1-202ENST00000358966 STHQ8IWL8 128 aa9.21□□□□□ -0.93
GGPS1-202ENST00000358966 MRAPQ8TCY5 172 aa9.21□□□□□ -0.93
GGPS1-202ENST00000358966 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.94
GGPS1-202ENST00000358966 NTN5Q8WTR8 489 aaPredicted RBP9.21□□□□□ -0.94
GGPS1-202ENST00000358966 M0R2P5 195 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 C3orf22Q8N5N4 141 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 F5H697 171 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 LINC00315P59091 139 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 TRPT1Q86TN4 253 aaKnown RBP9.2□□□□□ -0.94
GGPS1-202ENST00000358966 NDUFA11Q86Y39 141 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 NOTCH1P46531 2555 aa9.2□□□□□ -0.94
GGPS1-202ENST00000358966 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
GGPS1-202ENST00000358966 RPS28P62857 69 aaKnown RBP9.19□□□□□ -0.94
GGPS1-202ENST00000358966 KIF25-AS1Q9Y6Z4 181 aa9.19□□□□□ -0.94
GGPS1-202ENST00000358966 ANK2Q01484 3957 aa9.19□□□□□ -0.94
GGPS1-202ENST00000358966 FAM236AA0A1B0GUQ0 79 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 FAM236BA0A1B0GV22 79 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 IGLV2-18A0A075B6J9 118 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 A8MTW9 85 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 NXPH4O95158 308 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 UBE2D1P51668 147 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 Q9UF83 564 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 MED14OSP0DP75 135 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 ZNF56Q15929 161 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 SUMO4Q6EEV6 95 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 C19orf73Q9NVV2 129 aa9.18□□□□□ -0.94
GGPS1-202ENST00000358966 MRPL35Q9NZE8 188 aaKnown RBP9.18□□□□□ -0.94
GGPS1-202ENST00000358966 TRGV11A0A075B6L2 103 aa9.17□□□□□ -0.94
GGPS1-202ENST00000358966 CEMP1Q6PRD7 247 aaPredicted RBP9.17□□□□□ -0.94
GGPS1-202ENST00000358966 C1orf158Q8N1D5 194 aa9.17□□□□□ -0.94
GGPS1-202ENST00000358966 GIG44P09565 113 aaPredicted RBP9.17□□□□□ -0.94
GGPS1-202ENST00000358966 P0DMU3 169 aa9.17□□□□□ -0.94
GGPS1-202ENST00000358966 FAM231AP0DMU4 169 aa9.17□□□□□ -0.94
GGPS1-202ENST00000358966 FAM231CP0DMU5 169 aa9.17□□□□□ -0.94
GGPS1-202ENST00000358966 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
GGPS1-202ENST00000358966 UQCRQO14949 82 aa9.16□□□□□ -0.94
GGPS1-202ENST00000358966 INSP01308 110 aa9.16□□□□□ -0.94
GGPS1-202ENST00000358966 CRYGDP07320 174 aa9.16□□□□□ -0.94
GGPS1-202ENST00000358966 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
GGPS1-202ENST00000358966 LINC00526Q96FQ7 95 aa9.16□□□□□ -0.94
GGPS1-202ENST00000358966 PMVKQ15126 192 aa9.15□□□□□ -0.94
GGPS1-202ENST00000358966 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.95
GGPS1-202ENST00000358966 BEAN1Q3B7T3 259 aa9.14□□□□□ -0.95
GGPS1-202ENST00000358966 GAGE2AQ6NT46 116 aa9.14□□□□□ -0.95
GGPS1-202ENST00000358966 Q8N8P6 123 aa9.14□□□□□ -0.95
GGPS1-202ENST00000358966 C11orf72Q8NBR9 251 aa9.14□□□□□ -0.95
GGPS1-202ENST00000358966 NXT2Q9NPJ8 142 aaKnown RBP9.14□□□□□ -0.95
GGPS1-202ENST00000358966 ATP5LO75964 103 aa9.13□□□□□ -0.95
GGPS1-202ENST00000358966 POM121L12Q8N7R1 296 aa9.13□□□□□ -0.95
GGPS1-202ENST00000358966 TRBV7-7A0A0K0K1E9 115 aa9.13□□□□□ -0.95
GGPS1-202ENST00000358966 Q6ZSN1 163 aa9.13□□□□□ -0.95
GGPS1-202ENST00000358966 SEC61GP60059 68 aa9.12□□□□□ -0.95
GGPS1-202ENST00000358966 KRTAP24-1Q3LI83 254 aa9.12□□□□□ -0.95
GGPS1-202ENST00000358966 NBEAL1Q6ZS30 2694 aa9.12□□□□□ -0.95
GGPS1-202ENST00000358966 OXTP01178 125 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 LAGE3Q14657 143 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 Q5XG85 94 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 SDHAF1A6NFY7 115 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 M0QY20 66 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 C1orf43Q9BWL3 253 aa9.11□□□□□ -0.95
GGPS1-202ENST00000358966 CMYA5Q8N3K9 4069 aa9.1□□□□□ -0.95
GGPS1-202ENST00000358966 RPL13AP40429 203 aaKnown RBP9.1□□□□□ -0.95
GGPS1-202ENST00000358966 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
GGPS1-202ENST00000358966 RPL39P62891 51 aaKnown RBP9.1□□□□□ -0.95
GGPS1-202ENST00000358966 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
GGPS1-202ENST00000358966 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.95
GGPS1-202ENST00000358966 LINC01546A6NGU7 62 aa9.09□□□□□ -0.95
GGPS1-202ENST00000358966 Q6ZTI0 123 aa9.09□□□□□ -0.95
GGPS1-202ENST00000358966 UBE2WQ96B02 151 aa9.09□□□□□ -0.95
GGPS1-202ENST00000358966 TINCRA0A1B0GVN0 87 aa9.09□□□□□ -0.95
GGPS1-202ENST00000358966 CFC1BP0CG36 223 aa9.09□□□□□ -0.95
GGPS1-202ENST00000358966 CFC1P0CG37 223 aa9.09□□□□□ -0.95
GGPS1-202ENST00000358966 NOP10Q9NPE3 64 aaKnown RBP9.08□□□□□ -0.96
GGPS1-202ENST00000358966 hADV29S1A0JD25 119 aa9.08□□□□□ -0.96
GGPS1-202ENST00000358966 ZNF815PA8K554 130 aa9.08□□□□□ -0.96
GGPS1-202ENST00000358966 CYSTM1Q9H1C7 97 aa9.08□□□□□ -0.96
GGPS1-202ENST00000358966 PLNP26678 52 aa9.07□□□□□ -0.96
GGPS1-202ENST00000358966 DSCR8Q96T75 97 aa9.07□□□□□ -0.96
GGPS1-202ENST00000358966 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
GGPS1-202ENST00000358966 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
GGPS1-202ENST00000358966 PRIMA1Q86XR5 153 aa9.07□□□□□ -0.96
GGPS1-202ENST00000358966 CSNK1G2-AS1Q8NCQ2 148 aa9.07□□□□□ -0.96
GGPS1-202ENST00000358966 IGHV3-38A0A0C4DH36 116 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 COX7CP15954 63 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 350 ms