RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 DGAT2L7PQ6IED9 249 aa16.16■□□□□ 0.18
ALKAL1-201ENST00000358543 CLPSL2Q6UWE3 100 aa16.16■□□□□ 0.18
ALKAL1-201ENST00000358543 EPPK1P58107 5090 aaKnown RBP16.16■□□□□ 0.18
ALKAL1-201ENST00000358543 DNAH11Q96DT5 4516 aa16.16■□□□□ 0.18
ALKAL1-201ENST00000358543 ZNF664Q8N3J9 261 aa16.15■□□□□ 0.18
ALKAL1-201ENST00000358543 PRSS3P2Q8NHM4 247 aa16.15■□□□□ 0.18
ALKAL1-201ENST00000358543 A0A087WTM6 91 aa16.14■□□□□ 0.17
ALKAL1-201ENST00000358543 RPL39P62891 51 aaKnown RBP16.14■□□□□ 0.17
ALKAL1-201ENST00000358543 LRCOL1A6NCL2 159 aa16.13■□□□□ 0.17
ALKAL1-201ENST00000358543 LINC01546A6NGU7 62 aa16.13■□□□□ 0.17
ALKAL1-201ENST00000358543 COLCA2A8K830 154 aa16.13■□□□□ 0.17
ALKAL1-201ENST00000358543 SPANXA1Q9NS26 97 aa16.13■□□□□ 0.17
ALKAL1-201ENST00000358543 EREGO14944 169 aa16.12■□□□□ 0.17
ALKAL1-201ENST00000358543 G0S2P27469 103 aa16.12■□□□□ 0.17
ALKAL1-201ENST00000358543 MAPKAPK5-AS1Q8N8E1 139 aa16.12■□□□□ 0.17
ALKAL1-201ENST00000358543 KRTAP26-1Q6PEX3 210 aa16.11■□□□□ 0.17
ALKAL1-201ENST00000358543 PYGO1Q9Y3Y4 419 aa16.11■□□□□ 0.17
ALKAL1-201ENST00000358543 C18orf32Q8TCD1 76 aa16.1■□□□□ 0.17
ALKAL1-201ENST00000358543 CYSLTR1Q9Y271 337 aa16.1■□□□□ 0.17
ALKAL1-201ENST00000358543 MRPS36P82909 103 aaKnown RBP16.09■□□□□ 0.17
ALKAL1-201ENST00000358543 C2orf66Q6UXQ4 117 aa16.09■□□□□ 0.17
ALKAL1-201ENST00000358543 IGLV10-54A0A075B6I4 117 aa16.08■□□□□ 0.16
ALKAL1-201ENST00000358543 SCO1O75880 301 aa16.08■□□□□ 0.16
ALKAL1-201ENST00000358543 S100A1P23297 94 aa16.08■□□□□ 0.16
ALKAL1-201ENST00000358543 IGKV3OR2-268A0A0C4DH90 116 aa16.07■□□□□ 0.16
ALKAL1-201ENST00000358543 FA2HQ7L5A8 372 aa16.07■□□□□ 0.16
ALKAL1-201ENST00000358543 FAM104AQ969W3 186 aa16.07■□□□□ 0.16
ALKAL1-201ENST00000358543 LINC00959A0A1B0GUT2 108 aa16.06■□□□□ 0.16
ALKAL1-201ENST00000358543 Q6ZUT4 128 aa16.06■□□□□ 0.16
ALKAL1-201ENST00000358543 BAALCQ8WXS3 180 aa16.06■□□□□ 0.16
ALKAL1-201ENST00000358543 CCL25O15444 150 aa16.05■□□□□ 0.16
ALKAL1-201ENST00000358543 TRGC2P03986 189 aa16.05■□□□□ 0.16
ALKAL1-201ENST00000358543 NPSP0C0P6 89 aa16.05■□□□□ 0.16
ALKAL1-201ENST00000358543 LINC01549A6NIU2 74 aa16.04■□□□□ 0.16
ALKAL1-201ENST00000358543 CHCHD10Q8WYQ3 142 aaPredicted RBP16.04■□□□□ 0.16
ALKAL1-201ENST00000358543 TOMM6Q96B49 74 aa16.04■□□□□ 0.16
ALKAL1-201ENST00000358543 PKHD1P08F94 4074 aa16.04■□□□□ 0.16
ALKAL1-201ENST00000358543 ATP6V1G1O75348 118 aa16.03■□□□□ 0.16
ALKAL1-201ENST00000358543 LINC00614P0C842 121 aa16.03■□□□□ 0.16
ALKAL1-201ENST00000358543 RAB5BP61020 215 aa16.03■□□□□ 0.16
ALKAL1-201ENST00000358543 SS18Q15532 418 aa16.03■□□□□ 0.16
ALKAL1-201ENST00000358543 SPATA12Q7Z6I5 190 aa16.03■□□□□ 0.16
ALKAL1-201ENST00000358543 Q8N814 137 aa16.03■□□□□ 0.16
ALKAL1-201ENST00000358543 AP5S1Q9NUS5 200 aa16.03■□□□□ 0.16
ALKAL1-201ENST00000358543 IGIPA6NJ69 53 aa16.02■□□□□ 0.16
ALKAL1-201ENST00000358543 WFDC2Q14508 124 aa16.02■□□□□ 0.16
ALKAL1-201ENST00000358543 RNASE13Q5GAN3 156 aaKnown RBP16.02■□□□□ 0.16
ALKAL1-201ENST00000358543 URB1-AS1Q96HZ7 61 aa16.02■□□□□ 0.16
ALKAL1-201ENST00000358543 OPRPNQ99935 248 aaPredicted RBP16.02■□□□□ 0.16
ALKAL1-201ENST00000358543 PGPEP1Q9NXJ5 209 aa16.02■□□□□ 0.16
ALKAL1-201ENST00000358543 IGLV4-3A0A075B6K6 122 aa16.01■□□□□ 0.15
ALKAL1-201ENST00000358543 KRTAP10-2P60368 255 aa16.01■□□□□ 0.15
ALKAL1-201ENST00000358543 GAGE12HA6NDE8 117 aa16■□□□□ 0.15
ALKAL1-201ENST00000358543 C1orf196B1AJZ1 125 aa16■□□□□ 0.15
ALKAL1-201ENST00000358543 TMEM141Q96I45 108 aa16■□□□□ 0.15
ALKAL1-201ENST00000358543 TIMM17AQ99595 171 aa16■□□□□ 0.15
ALKAL1-201ENST00000358543 DNAH5Q8TE73 4624 aa16■□□□□ 0.15
ALKAL1-201ENST00000358543 LECT2O14960 151 aa15.99■□□□□ 0.15
ALKAL1-201ENST00000358543 CDPF1Q6NVV7 123 aa15.99■□□□□ 0.15
ALKAL1-201ENST00000358543 NTN5Q8WTR8 489 aaPredicted RBP15.99■□□□□ 0.15
ALKAL1-201ENST00000358543 DYNC1H1Q14204 4646 aaKnown RBP15.99■□□□□ 0.15
ALKAL1-201ENST00000358543 C14orf177Q52M58 125 aa15.98■□□□□ 0.15
ALKAL1-201ENST00000358543 CD164L2Q6UWJ8 174 aa15.98■□□□□ 0.15
ALKAL1-201ENST00000358543 ERASQ7Z444 233 aa15.98■□□□□ 0.15
ALKAL1-201ENST00000358543 TRAV13-1A0A0B4J241 112 aa15.97■□□□□ 0.15
ALKAL1-201ENST00000358543 XCL1P47992 114 aa15.97■□□□□ 0.15
ALKAL1-201ENST00000358543 FOXI1Q12951 378 aa15.97■□□□□ 0.15
ALKAL1-201ENST00000358543 PAPPA-AS1Q5QFB9 102 aa15.97■□□□□ 0.15
ALKAL1-201ENST00000358543 USP17L23D6RBM5 183 aa15.96■□□□□ 0.15
ALKAL1-201ENST00000358543 Q6ZN92 141 aa15.96■□□□□ 0.15
ALKAL1-201ENST00000358543 TEX43Q6ZNM6 134 aa15.96■□□□□ 0.15
ALKAL1-201ENST00000358543 CHCHD1Q96BP2 118 aaKnown RBP15.96■□□□□ 0.15
ALKAL1-201ENST00000358543 AMELXQ99217 191 aa15.96■□□□□ 0.15
ALKAL1-201ENST00000358543 SCGB3A1Q96QR1 104 aa15.95■□□□□ 0.14
ALKAL1-201ENST00000358543 VCX2Q9H322 139 aa15.95■□□□□ 0.14
ALKAL1-201ENST00000358543 BIRC6Q9NR09 4857 aa15.95■□□□□ 0.14
ALKAL1-201ENST00000358543 IFITM10A6NMD0 228 aa15.94■□□□□ 0.14
ALKAL1-201ENST00000358543 A0A096LNJ9 63 aa15.93■□□□□ 0.14
ALKAL1-201ENST00000358543 CFAP161Q6P656 301 aa15.93■□□□□ 0.14
ALKAL1-201ENST00000358543 C16orf90A8MZG2 172 aa15.92■□□□□ 0.14
ALKAL1-201ENST00000358543 HBDP02042 147 aa15.92■□□□□ 0.14
ALKAL1-201ENST00000358543 BAGE3Q86Y29 109 aa15.92■□□□□ 0.14
ALKAL1-201ENST00000358543 C2orf88Q9BSF0 95 aa15.92■□□□□ 0.14
ALKAL1-201ENST00000358543 LINC00173Q6ZV60 143 aa15.91■□□□□ 0.14
ALKAL1-201ENST00000358543 IGLV5-52A0A0A0MRZ9 124 aa15.9■□□□□ 0.14
ALKAL1-201ENST00000358543 LRP1BQ9NZR2 4599 aa15.9■□□□□ 0.14
ALKAL1-201ENST00000358543 PRSS1P07477 247 aa15.89■□□□□ 0.13
ALKAL1-201ENST00000358543 UBE2D1P51668 147 aa15.89■□□□□ 0.13
ALKAL1-201ENST00000358543 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.88■□□□□ 0.13
ALKAL1-201ENST00000358543 FUSP35637 526 aaKnown RBP eCLIP15.88■□□□□ 0.13
ALKAL1-201ENST00000358543 PMCHL1Q16048 86 aa15.88■□□□□ 0.13
ALKAL1-201ENST00000358543 PDZD11Q5EBL8 140 aa15.88■□□□□ 0.13
ALKAL1-201ENST00000358543 FAM19A3Q7Z5A8 133 aa15.88■□□□□ 0.13
ALKAL1-201ENST00000358543 C15orf56Q8N910 161 aa15.88■□□□□ 0.13
ALKAL1-201ENST00000358543 IGHV3OR16-9A0A0B4J2B5 98 aa15.87■□□□□ 0.13
ALKAL1-201ENST00000358543 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.87■□□□□ 0.13
ALKAL1-201ENST00000358543 COX7A2LO14548 114 aa15.87■□□□□ 0.13
ALKAL1-201ENST00000358543 LINC00242Q5T6M2 205 aa15.87■□□□□ 0.13
ALKAL1-201ENST00000358543 ZC2HC1BQ5TFG8 222 aa15.87■□□□□ 0.13
ALKAL1-201ENST00000358543 IGHV1-58A0A0C4DH39 117 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 370.2 ms