RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
TPM1-206ENST00000358278 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
TPM1-206ENST00000358278 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
TPM1-206ENST00000358278 SPANXA1Q9NS26 97 aa10.29□□□□□ -0.76
TPM1-206ENST00000358278 Q9HAA7 133 aa10.28□□□□□ -0.76
TPM1-206ENST00000358278 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
TPM1-206ENST00000358278 RYR2Q92736 4967 aa10.28□□□□□ -0.76
TPM1-206ENST00000358278 HSBP1O75506 76 aa10.27□□□□□ -0.76
TPM1-206ENST00000358278 PMCHL1Q16048 86 aa10.27□□□□□ -0.76
TPM1-206ENST00000358278 TOMM6Q96B49 74 aa10.27□□□□□ -0.76
TPM1-206ENST00000358278 SERF1AO75920 110 aa10.27□□□□□ -0.77
TPM1-206ENST00000358278 HBDP02042 147 aa10.27□□□□□ -0.77
TPM1-206ENST00000358278 REG3AQ06141 175 aa10.27□□□□□ -0.77
TPM1-206ENST00000358278 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.77
TPM1-206ENST00000358278 TRAV8-3A0A0A6YYJ7 113 aa10.26□□□□□ -0.77
TPM1-206ENST00000358278 IGKV3OR2-268A0A0C4DH90 116 aa10.26□□□□□ -0.77
TPM1-206ENST00000358278 LINC01549A6NIU2 74 aa10.26□□□□□ -0.77
TPM1-206ENST00000358278 Q6ZUT4 128 aa10.26□□□□□ -0.77
TPM1-206ENST00000358278 CDC42SE2Q9NRR3 84 aa10.26□□□□□ -0.77
TPM1-206ENST00000358278 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
TPM1-206ENST00000358278 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
TPM1-206ENST00000358278 C1orf134Q5TEV5 83 aa10.25□□□□□ -0.77
TPM1-206ENST00000358278 C6orf223Q8N319 242 aa10.25□□□□□ -0.77
TPM1-206ENST00000358278 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
TPM1-206ENST00000358278 MIAQ16674 131 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 ENHOQ6UWT2 76 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 NFE4Q86UQ8 179 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 A0A096LNJ9 63 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 LINC00310P59036 64 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
TPM1-206ENST00000358278 Q6ZN92 141 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 TMEM141Q96I45 108 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
TPM1-206ENST00000358278 DNAH10Q8IVF4 4471 aa10.24□□□□□ -0.77
TPM1-206ENST00000358278 FRAS1Q86XX4 4008 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 DNAH2Q9P225 4427 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 IGLV4-3A0A075B6K6 122 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 C4orf48Q5BLP8 95 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 ERASQ7Z444 233 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 RMI2Q96E14 147 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 TIMM17AQ99595 171 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 C1orf43Q9BWL3 253 aa10.23□□□□□ -0.77
TPM1-206ENST00000358278 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
TPM1-206ENST00000358278 FAM19A2Q8N3H0 131 aa10.22□□□□□ -0.77
TPM1-206ENST00000358278 RYR3Q15413 4870 aa10.22□□□□□ -0.77
TPM1-206ENST00000358278 IGLV10-54A0A075B6I4 117 aa10.21□□□□□ -0.77
TPM1-206ENST00000358278 NPSP0C0P6 89 aa10.21□□□□□ -0.77
TPM1-206ENST00000358278 NDUFA6P56556 154 aa10.21□□□□□ -0.77
TPM1-206ENST00000358278 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
TPM1-206ENST00000358278 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.21□□□□□ -0.78
TPM1-206ENST00000358278 PSCAO43653 123 aa10.21□□□□□ -0.78
TPM1-206ENST00000358278 NUPR1O60356 82 aa10.21□□□□□ -0.78
TPM1-206ENST00000358278 TEX43Q6ZNM6 134 aa10.21□□□□□ -0.78
TPM1-206ENST00000358278 FAM104AQ969W3 186 aa10.21□□□□□ -0.78
TPM1-206ENST00000358278 TRAV8-4A0A0B4J246 113 aa10.2□□□□□ -0.78
TPM1-206ENST00000358278 IFITM10A6NMD0 228 aa10.2□□□□□ -0.78
TPM1-206ENST00000358278 C2orf88Q9BSF0 95 aa10.2□□□□□ -0.78
TPM1-206ENST00000358278 TM2D2Q9BX73 214 aa10.2□□□□□ -0.78
TPM1-206ENST00000358278 VCX2Q9H322 139 aa10.2□□□□□ -0.78
TPM1-206ENST00000358278 TRAV13-1A0A0B4J241 112 aa10.19□□□□□ -0.78
TPM1-206ENST00000358278 LINC00959A0A1B0GUT2 108 aa10.19□□□□□ -0.78
TPM1-206ENST00000358278 SS18Q15532 418 aa10.19□□□□□ -0.78
TPM1-206ENST00000358278 COX11Q9Y6N1 276 aa10.19□□□□□ -0.78
TPM1-206ENST00000358278 ATP5LO75964 103 aa10.19□□□□□ -0.78
TPM1-206ENST00000358278 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
TPM1-206ENST00000358278 COA6Q5JTJ3 125 aaKnown RBP10.18□□□□□ -0.78
TPM1-206ENST00000358278 Q6ZRN7 208 aaPredicted RBP10.18□□□□□ -0.78
TPM1-206ENST00000358278 TMA7Q9Y2S6 64 aaKnown RBP10.18□□□□□ -0.78
TPM1-206ENST00000358278 LEPROTL1O95214 131 aa10.17□□□□□ -0.78
TPM1-206ENST00000358278 ZC2HC1BQ5TFG8 222 aa10.17□□□□□ -0.78
TPM1-206ENST00000358278 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
TPM1-206ENST00000358278 AMELXQ99217 191 aa10.17□□□□□ -0.78
TPM1-206ENST00000358278 RTL8CO15255 209 aa10.16□□□□□ -0.78
TPM1-206ENST00000358278 CCL25O15444 150 aa10.16□□□□□ -0.78
TPM1-206ENST00000358278 S100A6P06703 90 aa10.16□□□□□ -0.78
TPM1-206ENST00000358278 XCL1P47992 114 aa10.16□□□□□ -0.78
TPM1-206ENST00000358278 LINC00173Q6ZV60 143 aa10.16□□□□□ -0.78
TPM1-206ENST00000358278 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
TPM1-206ENST00000358278 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
TPM1-206ENST00000358278 FABP4P15090 132 aa10.15□□□□□ -0.78
TPM1-206ENST00000358278 PMVKQ15126 192 aa10.15□□□□□ -0.78
TPM1-206ENST00000358278 HSPB8Q9UJY1 196 aa10.15□□□□□ -0.78
TPM1-206ENST00000358278 GAGE12HA6NDE8 117 aa10.14□□□□□ -0.79
TPM1-206ENST00000358278 PRSS1P07477 247 aa10.13□□□□□ -0.79
TPM1-206ENST00000358278 UBE2D1P51668 147 aa10.13□□□□□ -0.79
TPM1-206ENST00000358278 CST9LQ9H4G1 147 aa10.13□□□□□ -0.79
TPM1-206ENST00000358278 DNAH17Q9UFH2 4485 aa10.13□□□□□ -0.79
TPM1-206ENST00000358278 KRTAP26-1Q6PEX3 210 aa10.12□□□□□ -0.79
TPM1-206ENST00000358278 CD164L2Q6UWJ8 174 aa10.12□□□□□ -0.79
TPM1-206ENST00000358278 LINC00336Q6ZUF6 198 aa10.12□□□□□ -0.79
TPM1-206ENST00000358278 PRSS29PA6NIE9 313 aa10.11□□□□□ -0.79
TPM1-206ENST00000358278 H0Y8G0 127 aa10.11□□□□□ -0.79
TPM1-206ENST00000358278 MAPKAPK5-AS1Q8N8E1 139 aa10.11□□□□□ -0.79
TPM1-206ENST00000358278 LECT2O14960 151 aa10.1□□□□□ -0.79
TPM1-206ENST00000358278 SEC11AP67812 179 aa10.1□□□□□ -0.79
TPM1-206ENST00000358278 TNP2Q05952 138 aa10.1□□□□□ -0.79
TPM1-206ENST00000358278 FOXI1Q12951 378 aa10.1□□□□□ -0.79
TPM1-206ENST00000358278 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms