RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 APLNQ9ULZ1 77 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 RBX1P62877 108 aa4.29□□□□□ -1.72
BRCA1-203ENST00000357654 FRMPD3Q5JV73 1810 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 HCG22E2RYF7 251 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 C9orf116Q5BN46 136 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-203ENST00000357654 C20orf173Q96LM9 149 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 CDKN2A-AS1Q9UH64 79 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 RLFQ13129 1914 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 PCNX2A6NKB5 2137 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 PYY3Q5JQD4 70 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 SOSTDC1Q6X4U4 206 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 C1orf229Q6ZS94 237 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-203ENST00000357654 IGLC6P0CF74 106 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 FXYD2P54710 66 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 LINC01554Q52M75 96 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 EDN2P20800 178 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 C20orf203Q8NBC4 194 aa4.28□□□□□ -1.72
BRCA1-203ENST00000357654 PHF3Q92576 2039 aaKnown RBP4.27□□□□□ -1.73
BRCA1-203ENST00000357654 PSPHP1O15172 72 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 EBI3Q14213 229 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 ABCA1O95477 2261 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 PLXND1Q9Y4D7 1925 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 EML6Q6ZMW3 1958 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 M0R2T5 61 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 CCDC140Q96MF4 163 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 ODF3BA8MYP8 253 aa4.27□□□□□ -1.73
BRCA1-203ENST00000357654 LINC00308Q8TCZ7 52 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 MYLKQ15746 1914 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 CYSRT1A8MQ03 144 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 CD164L2Q6UWJ8 174 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 PCNTO95613 3336 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 ZGRF1Q86YA3 2104 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 LINC00959A0A1B0GUT2 108 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 LOC105371267A0A1B0GV96 52 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 H7C423 109 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 CDIP1Q9H305 208 aa4.26□□□□□ -1.73
BRCA1-203ENST00000357654 E9PLD3 99 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 H0Y9P7 68 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 MOBPQ13875 183 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 ZNF702PQ9H963 129 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 PIEZO1Q92508 2521 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 DOCK11Q5JSL3 2073 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 Q6ZS49 121 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 Q96NJ1 140 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 LCTP09848 1927 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 LINC00575Q6W349 94 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 A0A087WSZ3 146 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 IBA57-AS1B1ANH7 110 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 NCOR1P1Q9H4R4 102 aa4.25□□□□□ -1.73
BRCA1-203ENST00000357654 E7EUB6 86 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 TNCP24821 2201 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 TRBV6-4A0A1B0GX49 114 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 PRR3P79522 188 aaKnown RBP4.24□□□□□ -1.73
BRCA1-203ENST00000357654 DOCK8Q8NF50 2099 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 WISP2O76076 250 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 C9orf92A6NGG3 77 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 UNQ6190/PRO20217Q6UXQ8 127 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 SSBP3-AS1Q7Z2R9 100 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 WNK2Q9Y3S1 2297 aa4.24□□□□□ -1.73
BRCA1-203ENST00000357654 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
BRCA1-203ENST00000357654 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 NHLRC4P0CG21 123 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-203ENST00000357654 KRTAP10-9P60411 292 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 LMO4P61968 165 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 SMIM11BQ8TCY0 68 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 RPL37AP61513 92 aaKnown RBP4.23□□□□□ -1.73
BRCA1-203ENST00000357654 MRGPRG-AS1Q2M3A8 158 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 DSCAML1Q8TD84 2053 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 A0A1B0GU69 56 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 WDR90Q96KV7 1748 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 CEP290O15078 2479 aa4.23□□□□□ -1.73
BRCA1-203ENST00000357654 K7EQG2 157 aa4.22□□□□□ -1.73
BRCA1-203ENST00000357654 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
BRCA1-203ENST00000357654 Q6ZS46 218 aa4.22□□□□□ -1.73
BRCA1-203ENST00000357654 MED12Q93074 2177 aa4.22□□□□□ -1.73
BRCA1-203ENST00000357654 ZNF80P51504 273 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-203ENST00000357654 IGLV4-3A0A075B6K6 122 aa4.22□□□□□ -1.73
BRCA1-203ENST00000357654 SMR3BP02814 79 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-203ENST00000357654 TET1Q8NFU7 2136 aa4.22□□□□□ -1.73
BRCA1-203ENST00000357654 NYNRINQ9P2P1 1898 aaKnown RBP4.21□□□□□ -1.73
BRCA1-203ENST00000357654 TRBV10-3A0A0K0K1G6 114 aa4.21□□□□□ -1.73
BRCA1-203ENST00000357654 RSPO1Q2MKA7 263 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-203ENST00000357654 PTPRFP10586 1907 aa4.21□□□□□ -1.74
BRCA1-203ENST00000357654 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
BRCA1-203ENST00000357654 SPAG11AQ6PDA7 123 aa4.21□□□□□ -1.74
BRCA1-203ENST00000357654 ATRXP46100 2492 aa4.21□□□□□ -1.74
BRCA1-203ENST00000357654 ACACAQ13085 2346 aa4.21□□□□□ -1.74
BRCA1-203ENST00000357654 NDUFA7O95182 113 aa4.21□□□□□ -1.74
BRCA1-203ENST00000357654 THSD7BQ9C0I4 1608 aa4.21□□□□□ -1.74
BRCA1-203ENST00000357654 SPRY4Q9C004 299 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 PTPRDP23468 1912 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 TRIAP1O43715 76 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 SBF1O95248 1867 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 RALGAPA2Q2PPJ7 1873 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 ADAMTS9Q9P2N4 1935 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 RTL8CO15255 209 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 RNF185Q96GF1 192 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms