RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 FAM19A2Q8N3H0 131 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 NRACQ8N912 160 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 GHRHP01286 108 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 PRSS47A8MTI9 375 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 Q6ZUT4 128 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 UBE2D4Q9Y2X8 147 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 TNCP24821 2201 aa6.38□□□□□ -1.39
UPF2-202ENST00000357604 LBHQ53QV2 105 aaPredicted RBP6.37□□□□□ -1.39
UPF2-202ENST00000357604 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
UPF2-202ENST00000357604 Q6ZSN1 163 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 C5orf38Q86SI9 138 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 PGPEP1Q9NXJ5 209 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 IGLV4-69A0A075B6H9 119 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 LEPROTO15243 131 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 UBE2BP63146 152 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 PLXNB1O43157 2135 aa6.37□□□□□ -1.39
UPF2-202ENST00000357604 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 RAB37Q96AX2 223 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 KIF25-AS1Q9Y6Z4 181 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 BSNQ9UPA5 3926 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 F8VRH5 84 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 SPINK8P0C7L1 97 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 RPL39P62891 51 aaKnown RBP6.36□□□□□ -1.39
UPF2-202ENST00000357604 LYRM7Q5U5X0 104 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 VAMP3Q15836 100 aa6.36□□□□□ -1.39
UPF2-202ENST00000357604 SYCNQ0VAF6 134 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 BAALCQ8WXS3 180 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 ACANP16112 2415 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 GAGE2BQ13066 116 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 OR13C6PQ8NH95 151 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 LINC00315P59091 139 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 FRYLO94915 3013 aa6.35□□□□□ -1.39
UPF2-202ENST00000357604 SYS1-DBNDD2H3BUS1 97 aa6.34□□□□□ -1.39
UPF2-202ENST00000357604 ZNF815PA8K554 130 aa6.34□□□□□ -1.4
UPF2-202ENST00000357604 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.4
UPF2-202ENST00000357604 IGLV4-3A0A075B6K6 122 aa6.33□□□□□ -1.4
UPF2-202ENST00000357604 C2orf48Q96LS8 159 aa6.33□□□□□ -1.4
UPF2-202ENST00000357604 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.33□□□□□ -1.4
UPF2-202ENST00000357604 C11orf86A6NJI1 115 aa6.33□□□□□ -1.4
UPF2-202ENST00000357604 HNRNPA3P51991 378 aaKnown RBP6.33□□□□□ -1.4
UPF2-202ENST00000357604 DCHS1Q96JQ0 3298 aa6.33□□□□□ -1.4
UPF2-202ENST00000357604 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
UPF2-202ENST00000357604 SLC25A20O43772 301 aa6.32□□□□□ -1.4
UPF2-202ENST00000357604 HIST1H4GQ99525 98 aa6.32□□□□□ -1.4
UPF2-202ENST00000357604 TENM4Q6N022 2769 aa6.32□□□□□ -1.4
UPF2-202ENST00000357604 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
UPF2-202ENST00000357604 SPATA45Q537H7 98 aa6.32□□□□□ -1.4
UPF2-202ENST00000357604 M0R143 59 aa6.31□□□□□ -1.4
UPF2-202ENST00000357604 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
UPF2-202ENST00000357604 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
UPF2-202ENST00000357604 C16orf90A8MZG2 172 aa6.31□□□□□ -1.4
UPF2-202ENST00000357604 SLC25A34Q6PIV7 304 aa6.31□□□□□ -1.4
UPF2-202ENST00000357604 APCP25054 2843 aa6.3□□□□□ -1.4
UPF2-202ENST00000357604 IGLC3P0DOY3 106 aa6.3□□□□□ -1.4
UPF2-202ENST00000357604 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
UPF2-202ENST00000357604 GAGE2EQ4V326 116 aa6.3□□□□□ -1.4
UPF2-202ENST00000357604 GAGE2DQ9UEU5 116 aa6.3□□□□□ -1.4
UPF2-202ENST00000357604 COX6CP09669 75 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 ESDP10768 282 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 UBE2D1P51668 147 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 MAJINQ3KP22 176 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 FREM2Q5SZK8 3169 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 PFN2P35080 140 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 MRPL35Q9NZE8 188 aaKnown RBP6.29□□□□□ -1.4
UPF2-202ENST00000357604 Q8IZM0 81 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 PDZD2O15018 2839 aa6.29□□□□□ -1.4
UPF2-202ENST00000357604 ANK3Q12955 4377 aaKnown RBP6.28□□□□□ -1.4
UPF2-202ENST00000357604 A6NDN8 102 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 RTL8CO15255 209 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 PSMB2P49721 201 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 J3QQQ9 107 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 COX17Q14061 63 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 SPATA12Q7Z6I5 190 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 LINC00518Q8N0U6 118 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 NHP2Q9NX24 153 aaKnown RBP6.28□□□□□ -1.4
UPF2-202ENST00000357604 SCGB1C2P0DMR2 95 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 LECT2O14960 151 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 ZC2HC1BQ5TFG8 222 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 LINC01545Q5VT33 79 aa6.28□□□□□ -1.4
UPF2-202ENST00000357604 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
UPF2-202ENST00000357604 FLNCQ14315 2725 aa6.27□□□□□ -1.41
UPF2-202ENST00000357604 IGLV4-60A0A075B6I1 120 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms