RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 LELP1Q5T871 98 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 LINC00173Q6ZV60 143 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 CD164L2Q6UWJ8 174 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 U3KQK5 164 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 URB1-AS1Q96HZ7 61 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 PSMG3-AS1Q96PY0 264 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 PPDPFQ9H3Y8 114 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 V9GYY9 64 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 IGKV2-28A0A075B6P5 120 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 IGKV2D-28P01615 120 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 GDF5OSQ5U4N7 250 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 ZNF702PQ9H963 129 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 TNRC6BQ9UPQ9 1833 aaKnown RBP4.13□□□□□ -1.75
PTPRD-202ENST00000356435 CCKP06307 115 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 LTBP2Q14767 1821 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 C20orf173Q96LM9 149 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 A0A0J9YWU9 116 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
PTPRD-202ENST00000356435 EML6Q6ZMW3 1958 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 IGLV5-52A0A0A0MRZ9 124 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 NDUFA7O95182 113 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 BBC3Q96PG8 261 aaPredicted RBP4.12□□□□□ -1.75
PTPRD-202ENST00000356435 PLCE1Q9P212 2302 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 XAGE1AQ9HD64 81 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 Q8N9L7 120 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 CCDC168Q8NDH2 2452 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 C1orf158Q8N1D5 194 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 DCANP1Q8TF63 244 aa4.12□□□□□ -1.75
PTPRD-202ENST00000356435 TMEM223A0PJW6 202 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 FAM236DA0A1B0GTK5 79 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 FAM236CP0DP71 79 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 NANOS2P60321 138 aaKnown RBP4.11□□□□□ -1.75
PTPRD-202ENST00000356435 COX17Q14061 63 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 MUC7Q8TAX7 377 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 ANKHD1Q8IWZ3 2542 aaKnown RBP4.11□□□□□ -1.75
PTPRD-202ENST00000356435 LINC01006Q8NI28 216 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 LINC00308Q8TCZ7 52 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 DOPEY1Q5JWR5 2465 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 ENHOQ6UWT2 76 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 MED12Q93074 2177 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 E7EUB6 86 aa4.11□□□□□ -1.75
PTPRD-202ENST00000356435 ZNF73O43830 326 aaPredicted RBP4.1□□□□□ -1.75
PTPRD-202ENST00000356435 COX8CQ7Z4L0 72 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 PTPN13Q12923 2485 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 IGLC6P0CF74 106 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 EBI3Q14213 229 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 SCXQ7RTU7 201 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 TTTY13Q9BZ97 58 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 CDKN2A-AS1Q9UH64 79 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 MALRD1Q5VYJ5 2156 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 CPAMD8Q8IZJ3 1885 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 C3orf84H3BNL1 204 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 Q6ZVQ6 151 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 M0QXV9 152 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 M0QY20 66 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 C11orf71Q6IPW1 123 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 IGLV4-3A0A075B6K6 122 aa4.1□□□□□ -1.75
PTPRD-202ENST00000356435 PRYO14603 147 aa4.09□□□□□ -1.75
PTPRD-202ENST00000356435 ZNF22P17026 224 aaPredicted RBP4.09□□□□□ -1.75
PTPRD-202ENST00000356435 ZNF80P51504 273 aaPredicted RBP4.09□□□□□ -1.75
PTPRD-202ENST00000356435 MSMPQ1L6U9 139 aa4.09□□□□□ -1.75
PTPRD-202ENST00000356435 TRBV30A0A0K0K1B3 111 aa4.09□□□□□ -1.75
PTPRD-202ENST00000356435 PLXNB1O43157 2135 aa4.09□□□□□ -1.75
PTPRD-202ENST00000356435 CNFNQ9BYD5 112 aa4.09□□□□□ -1.75
PTPRD-202ENST00000356435 SDIM1Q6ZPB5 146 aa4.09□□□□□ -1.75
PTPRD-202ENST00000356435 FAM240AA0A1B0GVK7 77 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 NDUFC2-KCTD14E9PQ53 114 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 Q6Q795 121 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 PTH2Q96A98 100 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 RPL37AP8A6NKH3 93 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 ZFAND3Q9H8U3 227 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 SLPIP03973 132 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 C6orf99Q4VX62 202 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 SERP2Q8N6R1 65 aa4.09□□□□□ -1.76
PTPRD-202ENST00000356435 LINC01546A6NGU7 62 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 FAM19A3Q7Z5A8 133 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 TIMM17BO60830 172 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 PIK3CD-AS1Q5SR53 167 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 TP73-AS1Q9UF72 201 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 PYGO1Q9Y3Y4 419 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 TRBV6-5A0A0K0K1A5 114 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 NAV2Q8IVL1 2488 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 C1orf134Q5TEV5 83 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 ATG2AQ2TAZ0 1938 aa4.08□□□□□ -1.76
PTPRD-202ENST00000356435 RAI1Q7Z5J4 1906 aaPredicted RBP4.08□□□□□ -1.76
PTPRD-202ENST00000356435 CHCHD7Q9BUK0 85 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 COL5A1P20908 1838 aaPredicted RBP4.07□□□□□ -1.76
PTPRD-202ENST00000356435 NDUFC1O43677 76 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 IGHV4-30-4P0DP06 118 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 WFDC2Q14508 124 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 MRGPRG-AS1Q2M3A8 158 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 C10orf99Q6UWK7 81 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 NOTCH4Q99466 2003 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms