RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 DNAJC30Q96LL9 226 aa10.11□□□□□ -0.79
LRP8-203ENST00000354412 CDKN2A-AS1Q9UH64 79 aa10.11□□□□□ -0.79
LRP8-203ENST00000354412 IGHV4-61A0A0C4DH41 118 aa10.11□□□□□ -0.79
LRP8-203ENST00000354412 FAM236AA0A1B0GUQ0 79 aa10.11□□□□□ -0.79
LRP8-203ENST00000354412 FAM236BA0A1B0GV22 79 aa10.11□□□□□ -0.79
LRP8-203ENST00000354412 HTN1P15515 57 aa10.11□□□□□ -0.79
LRP8-203ENST00000354412 SHISA2Q6UWI4 295 aa10.11□□□□□ -0.79
LRP8-203ENST00000354412 PROK1P58294 105 aa10.1□□□□□ -0.79
LRP8-203ENST00000354412 DGAT2L7PQ6IED9 249 aa10.1□□□□□ -0.79
LRP8-203ENST00000354412 ZNF843Q8N446 348 aa10.1□□□□□ -0.79
LRP8-203ENST00000354412 DAND5Q8N907 189 aa10.1□□□□□ -0.79
LRP8-203ENST00000354412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
LRP8-203ENST00000354412 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
LRP8-203ENST00000354412 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
LRP8-203ENST00000354412 TMEM89A2RUT3 159 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 TRACP01848 142 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 HELZ2Q9BYK8 2649 aaKnown RBP10.09□□□□□ -0.79
LRP8-203ENST00000354412 ATP5J2P56134 94 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 DSCR9P59020 149 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 HERVK_113P63121 156 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 LINC01587Q99440 93 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 LINC00467Q9BRT7 94 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 CUBNO60494 3623 aa10.09□□□□□ -0.79
LRP8-203ENST00000354412 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
LRP8-203ENST00000354412 MAPK1IP1LQ8NDC0 245 aa10.08□□□□□ -0.8
LRP8-203ENST00000354412 Q9H8V8 135 aa10.08□□□□□ -0.8
LRP8-203ENST00000354412 IGHV4-30-2A0A087WSY4 118 aa10.07□□□□□ -0.8
LRP8-203ENST00000354412 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
LRP8-203ENST00000354412 INAFM2P0DMQ5 153 aa10.07□□□□□ -0.8
LRP8-203ENST00000354412 CXCL5P42830 114 aa10.07□□□□□ -0.8
LRP8-203ENST00000354412 SONP18583 2426 aaKnown RBP10.06□□□□□ -0.8
LRP8-203ENST00000354412 KNCNA6PVL3 124 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 UQCRQO14949 82 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 IGHV3-53P01767 116 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 BAALC-AS2P0C853 105 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 SYNJ2BPP57105 145 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 DAZ2Q13117 558 aaKnown RBP10.06□□□□□ -0.8
LRP8-203ENST00000354412 DAZ4Q86SG3 579 aaKnown RBP10.06□□□□□ -0.8
LRP8-203ENST00000354412 C3orf22Q8N5N4 141 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 DAZ3Q9NR90 486 aaKnown RBP10.06□□□□□ -0.8
LRP8-203ENST00000354412 PEMTQ9UBM1 199 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 MSMBP08118 114 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
LRP8-203ENST00000354412 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
LRP8-203ENST00000354412 SDIM1Q6ZPB5 146 aa10.06□□□□□ -0.8
LRP8-203ENST00000354412 C9orf153Q5TBE3 101 aa10.05□□□□□ -0.8
LRP8-203ENST00000354412 ITPR2Q14571 2701 aa10.05□□□□□ -0.8
LRP8-203ENST00000354412 FAM222AQ5U5X8 452 aa10.05□□□□□ -0.8
LRP8-203ENST00000354412 Q6ZSN1 163 aa10.05□□□□□ -0.8
LRP8-203ENST00000354412 PPDPFQ9H3Y8 114 aa10.05□□□□□ -0.8
LRP8-203ENST00000354412 TMEM95Q3KNT9 176 aa10.04□□□□□ -0.8
LRP8-203ENST00000354412 CREBBPQ92793 2442 aa10.04□□□□□ -0.8
LRP8-203ENST00000354412 Q9UF83 564 aa10.04□□□□□ -0.8
LRP8-203ENST00000354412 KRTAP10-9P60411 292 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 B4DSR2 109 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 NDUFA7O95182 113 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 PF4P02776 101 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 HIST2H2BCQ6DN03 193 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.03□□□□□ -0.8
LRP8-203ENST00000354412 SMCR5Q8TEV8 140 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 LINC00526Q96FQ7 95 aa10.03□□□□□ -0.8
LRP8-203ENST00000354412 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
LRP8-203ENST00000354412 A8MTW9 85 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 COX6A2Q02221 97 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 PRIMA1Q86XR5 153 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 IGHV3OR16-12A0A075B7B8 117 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 HIST2H2BDQ6DRA6 164 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
LRP8-203ENST00000354412 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
LRP8-203ENST00000354412 DEFB131AP59861 70 aa10.01□□□□□ -0.81
LRP8-203ENST00000354412 Q8N2B8 174 aa10.01□□□□□ -0.81
LRP8-203ENST00000354412 NF1P21359 2839 aa10.01□□□□□ -0.81
LRP8-203ENST00000354412 OVOL2Q9BRP0 275 aa10.01□□□□□ -0.81
LRP8-203ENST00000354412 CSDC2Q9Y534 153 aaKnown RBP10.01□□□□□ -0.81
LRP8-203ENST00000354412 ACANP16112 2415 aa10□□□□□ -0.81
LRP8-203ENST00000354412 TRAV13-2A0A0B4J235 113 aa10□□□□□ -0.81
LRP8-203ENST00000354412 HOXD3P31249 432 aaPredicted RBP10□□□□□ -0.81
LRP8-203ENST00000354412 C3orf56Q8N813 242 aa10□□□□□ -0.81
LRP8-203ENST00000354412 ITPR3Q14573 2671 aa10□□□□□ -0.81
LRP8-203ENST00000354412 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
LRP8-203ENST00000354412 SOSTDC1Q6X4U4 206 aa10□□□□□ -0.81
LRP8-203ENST00000354412 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
LRP8-203ENST00000354412 RS1O15537 224 aa9.99□□□□□ -0.81
LRP8-203ENST00000354412 C10orf99Q6UWK7 81 aa9.99□□□□□ -0.81
LRP8-203ENST00000354412 GCN1Q92616 2671 aaKnown RBP9.99□□□□□ -0.81
LRP8-203ENST00000354412 FLNAP21333 2647 aaKnown RBP9.98□□□□□ -0.81
LRP8-203ENST00000354412 J3QLI3 93 aa9.98□□□□□ -0.81
LRP8-203ENST00000354412 COX7CP15954 63 aa9.98□□□□□ -0.81
LRP8-203ENST00000354412 GAGE2AQ6NT46 116 aa9.98□□□□□ -0.81
LRP8-203ENST00000354412 UBE2E2Q96LR5 201 aa9.98□□□□□ -0.81
LRP8-203ENST00000354412 SORL1Q92673 2214 aa9.98□□□□□ -0.81
LRP8-203ENST00000354412 AVPP01185 164 aa9.98□□□□□ -0.81
LRP8-203ENST00000354412 MALP21145 153 aa9.98□□□□□ -0.81
LRP8-203ENST00000354412 RPL28P46779 137 aaKnown RBP9.98□□□□□ -0.81
LRP8-203ENST00000354412 C11orf72Q8NBR9 251 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms