RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SNHG12Q9BXW3 62 aa14.31□□□□□ -0.12
TRIM4-202ENST00000354241 VCX2Q9H322 139 aa14.31□□□□□ -0.12
TRIM4-202ENST00000354241 RNASE13Q5GAN3 156 aaKnown RBP14.31□□□□□ -0.12
TRIM4-202ENST00000354241 DGAT2L7PQ6IED9 249 aa14.31□□□□□ -0.12
TRIM4-202ENST00000354241 FAM104AQ969W3 186 aa14.31□□□□□ -0.12
TRIM4-202ENST00000354241 TENM3Q9P273 2699 aa14.3□□□□□ -0.12
TRIM4-202ENST00000354241 FGF6P10767 208 aa14.3□□□□□ -0.12
TRIM4-202ENST00000354241 PLNP26678 52 aa14.3□□□□□ -0.12
TRIM4-202ENST00000354241 Q6ZUT4 128 aa14.3□□□□□ -0.12
TRIM4-202ENST00000354241 STPG4Q8N801 248 aa14.3□□□□□ -0.12
TRIM4-202ENST00000354241 NPSP0C0P6 89 aa14.29□□□□□ -0.12
TRIM4-202ENST00000354241 TIMM21Q9BVV7 248 aa14.29□□□□□ -0.12
TRIM4-202ENST00000354241 ICOSQ9Y6W8 199 aa14.29□□□□□ -0.12
TRIM4-202ENST00000354241 TCTAP57738 103 aa14.29□□□□□ -0.12
TRIM4-202ENST00000354241 MRPL23Q16540 153 aaKnown RBP14.29□□□□□ -0.12
TRIM4-202ENST00000354241 AMMECR1LQ6DCA0 310 aa14.29□□□□□ -0.12
TRIM4-202ENST00000354241 CHCHD5Q9BSY4 110 aa14.28□□□□□ -0.12
TRIM4-202ENST00000354241 SMAGPQ0VAQ4 97 aa14.27□□□□□ -0.12
TRIM4-202ENST00000354241 GAGE6Q13070 117 aa14.27□□□□□ -0.12
TRIM4-202ENST00000354241 AMELXQ99217 191 aa14.27□□□□□ -0.12
TRIM4-202ENST00000354241 IGLV4-69A0A075B6H9 119 aa14.27□□□□□ -0.13
TRIM4-202ENST00000354241 H7C423 109 aa14.27□□□□□ -0.13
TRIM4-202ENST00000354241 ANKRD39Q53RE8 183 aa14.27□□□□□ -0.13
TRIM4-202ENST00000354241 HUWE1Q7Z6Z7 4374 aaKnown RBP14.26□□□□□ -0.13
TRIM4-202ENST00000354241 MRPS36P82909 103 aaKnown RBP14.26□□□□□ -0.13
TRIM4-202ENST00000354241 B9D2Q9BPU9 175 aa14.26□□□□□ -0.13
TRIM4-202ENST00000354241 OR5A1Q8NGJ0 315 aa14.25□□□□□ -0.13
TRIM4-202ENST00000354241 TMEM101Q96IK0 257 aa14.25□□□□□ -0.13
TRIM4-202ENST00000354241 DEFB131BA0A096LNP1 70 aa14.25□□□□□ -0.13
TRIM4-202ENST00000354241 C11orf86A6NJI1 115 aa14.25□□□□□ -0.13
TRIM4-202ENST00000354241 IGLC3P0DOY3 106 aa14.25□□□□□ -0.13
TRIM4-202ENST00000354241 CSDC2Q9Y534 153 aaKnown RBP14.25□□□□□ -0.13
TRIM4-202ENST00000354241 SH2D6Q7Z4S9 175 aa14.23□□□□□ -0.13
TRIM4-202ENST00000354241 H3BNG1 76 aa14.22□□□□□ -0.13
TRIM4-202ENST00000354241 CHAC1Q9BUX1 264 aa14.22□□□□□ -0.13
TRIM4-202ENST00000354241 A0A0J9YXV3 536 aa14.21□□□□□ -0.13
TRIM4-202ENST00000354241 ZNF25P17030 456 aaPredicted RBP14.21□□□□□ -0.13
TRIM4-202ENST00000354241 CDC42SE2Q9NRR3 84 aa14.21□□□□□ -0.13
TRIM4-202ENST00000354241 UQCR10Q9UDW1 63 aa14.21□□□□□ -0.13
TRIM4-202ENST00000354241 DNHD1Q96M86 4753 aa14.21□□□□□ -0.13
TRIM4-202ENST00000354241 TMEM262E9PQX1 116 aa14.2□□□□□ -0.14
TRIM4-202ENST00000354241 NMUP48645 174 aa14.2□□□□□ -0.14
TRIM4-202ENST00000354241 NFE4Q86UQ8 179 aa14.2□□□□□ -0.14
TRIM4-202ENST00000354241 TMEM170BQ5T4T1 132 aa14.19□□□□□ -0.14
TRIM4-202ENST00000354241 TRAV10A0A0B4J240 114 aa14.19□□□□□ -0.14
TRIM4-202ENST00000354241 IGLV4-60A0A075B6I1 120 aa14.18□□□□□ -0.14
TRIM4-202ENST00000354241 TP73-AS1Q9UF72 201 aa14.18□□□□□ -0.14
TRIM4-202ENST00000354241 IGKV2D-26A0A0A0MRZ7 120 aa14.17□□□□□ -0.14
TRIM4-202ENST00000354241 UBE2D1P51668 147 aa14.17□□□□□ -0.14
TRIM4-202ENST00000354241 COX8AP10176 69 aa14.17□□□□□ -0.14
TRIM4-202ENST00000354241 LELP1Q5T871 98 aa14.17□□□□□ -0.14
TRIM4-202ENST00000354241 SLC25A34Q6PIV7 304 aa14.17□□□□□ -0.14
TRIM4-202ENST00000354241 LYPD5Q6UWN5 251 aa14.16□□□□□ -0.14
TRIM4-202ENST00000354241 DNAH9Q9NYC9 4486 aa14.16□□□□□ -0.14
TRIM4-202ENST00000354241 TRAV13-1A0A0B4J241 112 aa14.15□□□□□ -0.14
TRIM4-202ENST00000354241 ZNF22P17026 224 aaPredicted RBP14.15□□□□□ -0.14
TRIM4-202ENST00000354241 MPV17L2Q567V2 206 aa14.15□□□□□ -0.14
TRIM4-202ENST00000354241 TINCRA0A1B0GVN0 87 aa14.15□□□□□ -0.14
TRIM4-202ENST00000354241 HERVK_113P61574 105 aa14.15□□□□□ -0.14
TRIM4-202ENST00000354241 RBX1P62877 108 aa14.15□□□□□ -0.14
TRIM4-202ENST00000354241 PCP2Q8IVA1 136 aa14.14□□□□□ -0.15
TRIM4-202ENST00000354241 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
TRIM4-202ENST00000354241 HNRNPA3P51991 378 aaKnown RBP14.13□□□□□ -0.15
TRIM4-202ENST00000354241 GEMIN7Q9H840 131 aaKnown RBP14.13□□□□□ -0.15
TRIM4-202ENST00000354241 A0A1B0GUV1 79 aa14.13□□□□□ -0.15
TRIM4-202ENST00000354241 E9PLD3 99 aa14.12□□□□□ -0.15
TRIM4-202ENST00000354241 NHLRC4P0CG21 123 aaPredicted RBP14.12□□□□□ -0.15
TRIM4-202ENST00000354241 TTTY13Q9BZ97 58 aa14.12□□□□□ -0.15
TRIM4-202ENST00000354241 TRAV8-6A0A0B4J262 113 aa14.11□□□□□ -0.15
TRIM4-202ENST00000354241 TMEM223A0PJW6 202 aa14.11□□□□□ -0.15
TRIM4-202ENST00000354241 TIRAPP58753 221 aa14.11□□□□□ -0.15
TRIM4-202ENST00000354241 LINC00242Q5T6M2 205 aa14.11□□□□□ -0.15
TRIM4-202ENST00000354241 COL5A1-AS1Q5SY13 56 aa14.1□□□□□ -0.15
TRIM4-202ENST00000354241 BOD1L2Q8IYS8 172 aa14.1□□□□□ -0.15
TRIM4-202ENST00000354241 COX6A2Q02221 97 aa14.09□□□□□ -0.15
TRIM4-202ENST00000354241 Q8N3U1 123 aa14.09□□□□□ -0.15
TRIM4-202ENST00000354241 IGHV3-64A0A075B6Q5 118 aa14.09□□□□□ -0.15
TRIM4-202ENST00000354241 HERVK_113P63121 156 aa14.09□□□□□ -0.15
TRIM4-202ENST00000354241 SEC11AP67812 179 aa14.09□□□□□ -0.15
TRIM4-202ENST00000354241 FAM19A3Q7Z5A8 133 aa14.09□□□□□ -0.15
TRIM4-202ENST00000354241 MRPS16Q9Y3D3 137 aaKnown RBP14.09□□□□□ -0.15
TRIM4-202ENST00000354241 ESRGQ1W209 222 aa14.07□□□□□ -0.16
TRIM4-202ENST00000354241 CLPSL2Q6UWE3 100 aa14.07□□□□□ -0.16
TRIM4-202ENST00000354241 C15orf53Q8NAA6 179 aa14.07□□□□□ -0.16
TRIM4-202ENST00000354241 DLEU1O43261 78 aa14.07□□□□□ -0.16
TRIM4-202ENST00000354241 ANGP03950 147 aaKnown RBP14.07□□□□□ -0.16
TRIM4-202ENST00000354241 CDKN2A-AS1Q9UH64 79 aa14.07□□□□□ -0.16
TRIM4-202ENST00000354241 MAPKAPK5-AS1Q8N8E1 139 aa14.06□□□□□ -0.16
TRIM4-202ENST00000354241 IGLV5-45A0A087WSX0 123 aa14.05□□□□□ -0.16
TRIM4-202ENST00000354241 IGLL5B9A064 214 aa14.05□□□□□ -0.16
TRIM4-202ENST00000354241 SPINK8P0C7L1 97 aa14.05□□□□□ -0.16
TRIM4-202ENST00000354241 H3BRM9 83 aa14.05□□□□□ -0.16
TRIM4-202ENST00000354241 LINC00269Q8N2A0 174 aa14.05□□□□□ -0.16
TRIM4-202ENST00000354241 LEPROTO15243 131 aa14.04□□□□□ -0.16
TRIM4-202ENST00000354241 C2orf91Q6ZV80 131 aa14.04□□□□□ -0.16
TRIM4-202ENST00000354241 WFDC10BQ8IUB3 73 aa14.04□□□□□ -0.16
TRIM4-202ENST00000354241 TRAV8-3A0A0A6YYJ7 113 aa14.03□□□□□ -0.16
TRIM4-202ENST00000354241 LINC00959A0A1B0GUT2 108 aa14.03□□□□□ -0.16
TRIM4-202ENST00000354241 TSPEAR-AS2P59090 65 aa14.03□□□□□ -0.16
TRIM4-202ENST00000354241 COL7A1Q02388 2944 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms