RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PRNDQ9UKY0 176 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 MYH3P11055 1940 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 MYH8P13535 1937 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 TRGV10A0A0A0MS01 117 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 MUC21A0A0G2JKD1 596 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 MUC21A0A140T8X8 626 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1W2PNN7 141 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 C11orf86A6NJI1 115 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 DEFB108AA8MXU0 73 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 M0R2P5 195 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 FXYD1O00168 92 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 HYPMO75409 117 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV3-53P01767 116 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 PPBPP02775 128 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 SRP19P09132 144 aaKnown RBP0.9□□□□□ -2.27
BRCA1-202ENST00000354071 GZMBP10144 247 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 PLNP26678 52 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 ATP5G3P48201 142 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 ZNF117Q03924 483 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 RPL18Q07020 188 aaKnown RBP0.9□□□□□ -2.27
BRCA1-202ENST00000354071 KRTAP13-2Q52LG2 175 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 Q5BKY6 102 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 SLC48A1Q6P1K1 146 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 HEPN1Q6WQI6 88 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 CYP2G1PQ6ZSU1 146 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.9□□□□□ -2.27
BRCA1-202ENST00000354071 SDF2Q99470 211 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 SNHG12Q9BXW3 62 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 OR2H1Q9GZK4 316 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 AMMECR1Q9Y4X0 333 aaPredicted RBP0.9□□□□□ -2.27
BRCA1-202ENST00000354071 CITO14578 2027 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 MYH7P12883 1935 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 ZNF106Q9H2Y7 1883 aaKnown RBP0.9□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV3-73A0A0B4J1V6 119 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 SDHAF1A6NFY7 115 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 C9JAW5 83 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 H0YGG7 62 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 H3BRM9 83 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 BUB1B-PAK6H3BSN5 160 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 HCRTO43612 131 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 DPM2O94777 84 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 NAPSAO96009 420 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 PPYP01298 95 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 HBDP02042 147 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 RPL28P46779 137 aaKnown RBP0.89□□□□□ -2.27
BRCA1-202ENST00000354071 RPS11P62280 158 aaKnown RBP eCLIP0.89□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM78Q5T7P6 136 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 FKBP1CQ5VVH2 108 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 Q6ZS49 121 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 WFDC5Q8TCV5 224 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 DCANP1Q8TF63 244 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 DNAJC30Q96LL9 226 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 RPRMQ9NS64 109 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 SMPXQ9UHP9 88 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 HIGD1AQ9Y241 93 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 ARHGAP32A7KAX9 2087 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 ABCA1O95477 2261 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 PLXND1Q9Y4D7 1925 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1B0GUT8 65 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1W2PNM2 257 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1W2PQD3 144 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IGKCP01834 107 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 ARL14EPLP0DKL9 152 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 RHOGP84095 191 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 PSG9Q00887 426 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 FDCSPQ8NFU4 85 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 OR5P3Q8WZ94 311 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 CHCHD1Q96BP2 118 aaKnown RBP0.89□□□□□ -2.27
BRCA1-202ENST00000354071 SH3BGRL3Q9H299 93 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM242Q9NWH2 141 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 LAMTOR3Q9UHA4 124 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 SNRNP200O75643 2136 aaKnown RBP0.89□□□□□ -2.27
BRCA1-202ENST00000354071 APC2O95996 2303 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV13-1A0A0B4J241 112 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1B0GU33 70 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1W2PRE2 83 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 K7EP34 96 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 RTL8CO15255 209 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 NDUFB3O43676 98 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV1-69P01742 117 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 NPC2P61916 151 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 MIC13Q5XKP0 118 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM91Q6ZNR0 172 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 DEFB119Q8N690 84 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 C15orf53Q8NAA6 179 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 DEFB124Q8NES8 71 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 DYNLRB2Q8TF09 96 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 CT55Q8WUE5 264 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IFI27L1Q96BM0 104 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 MYH13Q9UKX3 1938 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 PLXNA1Q9UIW2 1896 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 MAP1AP78559 2803 aaPredicted RBP0.89□□□□□ -2.27
BRCA1-202ENST00000354071 SCN9AQ15858 1988 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV3-7A0A075B6H7 116 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV3D-11A0A0A0MRZ8 115 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV3OR2-268A0A0C4DH90 116 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 HIGD1CA8MV81 97 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 FNDC10F2Z333 226 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 CRPP02741 224 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms