RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 UBE2BP63146 152 aa10.4□□□□□ -0.74
MUC1-204ENST00000343256 RPP21Q9H633 154 aaKnown RBP10.4□□□□□ -0.74
MUC1-204ENST00000343256 PFDN1O60925 122 aa10.39□□□□□ -0.75
MUC1-204ENST00000343256 KRTAP7-1Q8IUC3 87 aa10.39□□□□□ -0.75
MUC1-204ENST00000343256 C19orf71A6NCJ1 209 aa10.38□□□□□ -0.75
MUC1-204ENST00000343256 ESDP10768 282 aa10.38□□□□□ -0.75
MUC1-204ENST00000343256 PMCHP20382 165 aa10.38□□□□□ -0.75
MUC1-204ENST00000343256 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
MUC1-204ENST00000343256 TWIST1Q15672 202 aa10.38□□□□□ -0.75
MUC1-204ENST00000343256 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
MUC1-204ENST00000343256 A0A087X002 238 aa10.37□□□□□ -0.75
MUC1-204ENST00000343256 RNF151Q2KHN1 245 aa10.37□□□□□ -0.75
MUC1-204ENST00000343256 S100ZQ8WXG8 99 aa10.37□□□□□ -0.75
MUC1-204ENST00000343256 I3L3M4 83 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 M0QXV9 152 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 IFNA1P01562 189 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 FOXA3P55318 350 aaPredicted RBP10.36□□□□□ -0.75
MUC1-204ENST00000343256 GAGE2EQ4V326 116 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 CENPWQ5EE01 88 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 MRAP2Q96G30 205 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 TMEM242Q9NWH2 141 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 GAGE2DQ9UEU5 116 aa10.36□□□□□ -0.75
MUC1-204ENST00000343256 TSHBP01222 138 aa10.35□□□□□ -0.75
MUC1-204ENST00000343256 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
MUC1-204ENST00000343256 SFT2D1Q8WV19 159 aa10.35□□□□□ -0.75
MUC1-204ENST00000343256 ALG5Q9Y673 324 aa10.35□□□□□ -0.75
MUC1-204ENST00000343256 FXYD6-FXYD2A0A087WZ82 144 aa10.34□□□□□ -0.75
MUC1-204ENST00000343256 XKRY2A2RUG3 117 aa10.34□□□□□ -0.75
MUC1-204ENST00000343256 C1orf196B1AJZ1 125 aa10.34□□□□□ -0.75
MUC1-204ENST00000343256 G3V3Q6 166 aa10.34□□□□□ -0.75
MUC1-204ENST00000343256 LINC01547P58512 204 aaPredicted RBP10.34□□□□□ -0.75
MUC1-204ENST00000343256 C9orf62Q8N4C0 152 aa10.34□□□□□ -0.75
MUC1-204ENST00000343256 TYMSOSQ8TAI1 123 aa10.34□□□□□ -0.75
MUC1-204ENST00000343256 ZNF861PO60384 105 aa10.33□□□□□ -0.76
MUC1-204ENST00000343256 CTRLP40313 264 aa10.33□□□□□ -0.76
MUC1-204ENST00000343256 TPRXLQ17RH7 258 aa10.33□□□□□ -0.76
MUC1-204ENST00000343256 C10orf25Q5T742 122 aa10.33□□□□□ -0.76
MUC1-204ENST00000343256 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
MUC1-204ENST00000343256 KCNRGQ8N5I3 272 aa10.33□□□□□ -0.76
MUC1-204ENST00000343256 IMMP2LQ96T52 175 aa10.33□□□□□ -0.76
MUC1-204ENST00000343256 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
MUC1-204ENST00000343256 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
MUC1-204ENST00000343256 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
MUC1-204ENST00000343256 RAB19A4D1S5 217 aa10.31□□□□□ -0.76
MUC1-204ENST00000343256 SRSF3P84103 164 aaKnown RBP10.31□□□□□ -0.76
MUC1-204ENST00000343256 FAM213BQ8TBF2 198 aa10.31□□□□□ -0.76
MUC1-204ENST00000343256 MBD3L1Q8WWY6 194 aa10.31□□□□□ -0.76
MUC1-204ENST00000343256 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
MUC1-204ENST00000343256 CNFNQ9BYD5 112 aa10.3□□□□□ -0.76
MUC1-204ENST00000343256 C6orf48Q9UBA6 75 aa10.3□□□□□ -0.76
MUC1-204ENST00000343256 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
MUC1-204ENST00000343256 TLX1NBP0CAT3 122 aa10.29□□□□□ -0.76
MUC1-204ENST00000343256 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
MUC1-204ENST00000343256 LINC00299Q6ZSB3 139 aa10.29□□□□□ -0.76
MUC1-204ENST00000343256 ORAOV1Q8WV07 137 aa10.29□□□□□ -0.76
MUC1-204ENST00000343256 C7orf77A4D0Y5 90 aa10.28□□□□□ -0.76
MUC1-204ENST00000343256 NDUFA1O15239 70 aa10.28□□□□□ -0.76
MUC1-204ENST00000343256 CRYGAP11844 174 aa10.28□□□□□ -0.76
MUC1-204ENST00000343256 OR10D4PQ8NGN7 298 aa10.28□□□□□ -0.76
MUC1-204ENST00000343256 C11orf52Q96A22 123 aa10.28□□□□□ -0.76
MUC1-204ENST00000343256 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
MUC1-204ENST00000343256 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.77
MUC1-204ENST00000343256 GNG4P50150 75 aa10.27□□□□□ -0.77
MUC1-204ENST00000343256 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
MUC1-204ENST00000343256 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.77
MUC1-204ENST00000343256 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
MUC1-204ENST00000343256 NUDT10Q8NFP7 164 aa10.26□□□□□ -0.77
MUC1-204ENST00000343256 NUDT11Q96G61 164 aa10.26□□□□□ -0.77
MUC1-204ENST00000343256 ST20Q9HBF5 79 aa10.26□□□□□ -0.77
MUC1-204ENST00000343256 Q6ZUT4 128 aa10.25□□□□□ -0.77
MUC1-204ENST00000343256 GIPP09681 153 aaPredicted RBP10.24□□□□□ -0.77
MUC1-204ENST00000343256 CCL20P78556 96 aa10.24□□□□□ -0.77
MUC1-204ENST00000343256 TMEM241Q24JQ0 296 aa10.24□□□□□ -0.77
MUC1-204ENST00000343256 C9orf129Q5T035 196 aaKnown RBP10.24□□□□□ -0.77
MUC1-204ENST00000343256 LINC00173Q6ZV60 143 aa10.24□□□□□ -0.77
MUC1-204ENST00000343256 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
MUC1-204ENST00000343256 NDUFA13Q9P0J0 144 aa10.24□□□□□ -0.77
MUC1-204ENST00000343256 UBE2D4Q9Y2X8 147 aa10.24□□□□□ -0.77
MUC1-204ENST00000343256 TRBV20OR9-2A0A075B6H5 130 aa10.23□□□□□ -0.77
MUC1-204ENST00000343256 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
MUC1-204ENST00000343256 KRTAP13-2Q52LG2 175 aa10.23□□□□□ -0.77
MUC1-204ENST00000343256 KRTAP4-1Q9BYQ7 146 aa10.23□□□□□ -0.77
MUC1-204ENST00000343256 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
MUC1-204ENST00000343256 F8WDY8 70 aa10.22□□□□□ -0.77
MUC1-204ENST00000343256 ARPC5O15511 151 aa10.22□□□□□ -0.77
MUC1-204ENST00000343256 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
MUC1-204ENST00000343256 SMIM12Q96EX1 92 aa10.22□□□□□ -0.77
MUC1-204ENST00000343256 LINC00304Q8N9R0 145 aa10.21□□□□□ -0.77
MUC1-204ENST00000343256 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
MUC1-204ENST00000343256 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.77
MUC1-204ENST00000343256 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
MUC1-204ENST00000343256 NUPR1O60356 82 aa10.2□□□□□ -0.78
MUC1-204ENST00000343256 FCER1GP30273 86 aa10.19□□□□□ -0.78
MUC1-204ENST00000343256 MANBALQ9NQG1 85 aa10.19□□□□□ -0.78
MUC1-204ENST00000343256 BIN3Q9NQY0 253 aa10.19□□□□□ -0.78
MUC1-204ENST00000343256 IGHV3OR16-9A0A0B4J2B5 98 aa10.18□□□□□ -0.78
MUC1-204ENST00000343256 UMAD1C9J7I0 102 aa10.18□□□□□ -0.78
MUC1-204ENST00000343256 FAM210AQ96ND0 272 aa10.18□□□□□ -0.78
MUC1-204ENST00000343256 RPL28P46779 137 aaKnown RBP10.17□□□□□ -0.78
MUC1-204ENST00000343256 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms