RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 A0A1B0GV90 55 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 A8MWL6 223 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 M0R143 59 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 CRPP02741 224 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 APCSP02743 223 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 TWIST1Q15672 202 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 SMIM15Q7Z3B0 74 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 UBE2WQ96B02 151 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 MIEN1Q9BRT3 115 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 CHCHD5Q9BSY4 110 aa8.85□□□□□ -0.99
SIRPB3P-201ENST00000340424 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
SIRPB3P-201ENST00000340424 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -0.99
SIRPB3P-201ENST00000340424 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
SIRPB3P-201ENST00000340424 PGLYRP4Q96LB8 373 aa8.84□□□□□ -0.99
SIRPB3P-201ENST00000340424 TMEM70Q9BUB7 260 aa8.84□□□□□ -0.99
SIRPB3P-201ENST00000340424 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
SIRPB3P-201ENST00000340424 DNAH8Q96JB1 4490 aa8.84□□□□□ -0.99
SIRPB3P-201ENST00000340424 IGHV1-24A0A0C4DH33 117 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 MPV17L2Q567V2 206 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 NTM-AS1Q6ZSK4 140 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 GATD1Q8NB37 220 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 NUP35Q8NFH5 326 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 C18orf32Q8TCD1 76 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 VAMP8Q9BV40 100 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 C1orf43Q9BWL3 253 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 SNHG12Q9BXW3 62 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 FAT1Q14517 4588 aa8.83□□□□□ -1
SIRPB3P-201ENST00000340424 ANGP03950 147 aaKnown RBP8.82□□□□□ -1
SIRPB3P-201ENST00000340424 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
SIRPB3P-201ENST00000340424 MIAQ16674 131 aa8.82□□□□□ -1
SIRPB3P-201ENST00000340424 GTSF1Q8WW33 167 aa8.82□□□□□ -1
SIRPB3P-201ENST00000340424 C20orf202A1L168 122 aa8.81□□□□□ -1
SIRPB3P-201ENST00000340424 AMTP48728 403 aa8.81□□□□□ -1
SIRPB3P-201ENST00000340424 XGP55808 180 aa8.81□□□□□ -1
SIRPB3P-201ENST00000340424 C14orf177Q52M58 125 aa8.81□□□□□ -1
SIRPB3P-201ENST00000340424 MRPL54Q6P161 138 aaKnown RBP8.81□□□□□ -1
SIRPB3P-201ENST00000340424 BORCS7Q96B45 105 aa8.81□□□□□ -1
SIRPB3P-201ENST00000340424 ALKBH7Q9BT30 221 aaPredicted RBP8.81□□□□□ -1
SIRPB3P-201ENST00000340424 RBX1P62877 108 aa8.8□□□□□ -1
SIRPB3P-201ENST00000340424 WFDC2Q14508 124 aa8.8□□□□□ -1
SIRPB3P-201ENST00000340424 ENHOQ6UWT2 76 aa8.8□□□□□ -1
SIRPB3P-201ENST00000340424 BAALCQ8WXS3 180 aa8.8□□□□□ -1
SIRPB3P-201ENST00000340424 TMEM243Q9BU79 118 aa8.8□□□□□ -1
SIRPB3P-201ENST00000340424 KRTAP4-5Q9BYR2 181 aa8.8□□□□□ -1
SIRPB3P-201ENST00000340424 PRR34Q9NV39 138 aa8.8□□□□□ -1
SIRPB3P-201ENST00000340424 A0A1B0GUV1 79 aa8.79□□□□□ -1
SIRPB3P-201ENST00000340424 HIGD1CA8MV81 97 aa8.79□□□□□ -1
SIRPB3P-201ENST00000340424 LECT2O14960 151 aa8.79□□□□□ -1
SIRPB3P-201ENST00000340424 HBBP68871 147 aa8.79□□□□□ -1
SIRPB3P-201ENST00000340424 COTL1Q14019 142 aa8.79□□□□□ -1
SIRPB3P-201ENST00000340424 PMCHL1Q16048 86 aa8.79□□□□□ -1
SIRPB3P-201ENST00000340424 A0A1B0GW15 77 aa8.78□□□□□ -1
SIRPB3P-201ENST00000340424 EPM2AB3EWF7 344 aa8.78□□□□□ -1
SIRPB3P-201ENST00000340424 C3orf79P0CE67 100 aa8.78□□□□□ -1
SIRPB3P-201ENST00000340424 PMCHP20382 165 aa8.78□□□□□ -1
SIRPB3P-201ENST00000340424 GAGE6Q13070 117 aa8.78□□□□□ -1
SIRPB3P-201ENST00000340424 CHCHD1Q96BP2 118 aaKnown RBP8.78□□□□□ -1
SIRPB3P-201ENST00000340424 A0A1B0GUT8 65 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 UBE2L6O14933 153 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 TCAPO15273 167 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 NCR2O95944 276 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 KRTDAPP60985 99 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 KIAA1644Q3SXP7 199 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 LINC00269Q8N2A0 174 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 UQCR10Q9UDW1 63 aa8.77□□□□□ -1.01
SIRPB3P-201ENST00000340424 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.76□□□□□ -1.01
SIRPB3P-201ENST00000340424 TRAV8-4A0A0B4J246 113 aa8.76□□□□□ -1.01
SIRPB3P-201ENST00000340424 IGLC3P0DOY3 106 aa8.76□□□□□ -1.01
SIRPB3P-201ENST00000340424 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
SIRPB3P-201ENST00000340424 HSBP1O75506 76 aa8.75□□□□□ -1.01
SIRPB3P-201ENST00000340424 REG3AQ06141 175 aa8.75□□□□□ -1.01
SIRPB3P-201ENST00000340424 Q6ZSA8 131 aa8.75□□□□□ -1.01
SIRPB3P-201ENST00000340424 TMEM191AQ9H0A3 160 aa8.75□□□□□ -1.01
SIRPB3P-201ENST00000340424 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
SIRPB3P-201ENST00000340424 PAM16Q9Y3D7 125 aa8.75□□□□□ -1.01
SIRPB3P-201ENST00000340424 TRBV6-5A0A0K0K1A5 114 aa8.74□□□□□ -1.01
SIRPB3P-201ENST00000340424 H7C423 109 aa8.74□□□□□ -1.01
SIRPB3P-201ENST00000340424 SPATA45Q537H7 98 aa8.74□□□□□ -1.01
SIRPB3P-201ENST00000340424 URB1-AS1Q96HZ7 61 aa8.74□□□□□ -1.01
SIRPB3P-201ENST00000340424 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
SIRPB3P-201ENST00000340424 RIGQ13278 110 aa8.73□□□□□ -1.01
SIRPB3P-201ENST00000340424 Q5VSD8 79 aa8.73□□□□□ -1.01
SIRPB3P-201ENST00000340424 C20orf203Q8NBC4 194 aa8.73□□□□□ -1.01
SIRPB3P-201ENST00000340424 RPL39LQ96EH5 51 aaKnown RBP8.73□□□□□ -1.01
SIRPB3P-201ENST00000340424 MRAP2Q96G30 205 aa8.73□□□□□ -1.01
SIRPB3P-201ENST00000340424 USP17L23D6RBM5 183 aa8.72□□□□□ -1.01
SIRPB3P-201ENST00000340424 I3L3M4 83 aa8.72□□□□□ -1.01
SIRPB3P-201ENST00000340424 PPP1R17O96001 155 aa8.72□□□□□ -1.01
SIRPB3P-201ENST00000340424 COL5A1-AS1Q5SY13 56 aa8.72□□□□□ -1.01
SIRPB3P-201ENST00000340424 CLPSL2Q6UWE3 100 aa8.72□□□□□ -1.01
SIRPB3P-201ENST00000340424 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
SIRPB3P-201ENST00000340424 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.02
SIRPB3P-201ENST00000340424 DGAT2L7PQ6IED9 249 aa8.71□□□□□ -1.02
SIRPB3P-201ENST00000340424 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
SIRPB3P-201ENST00000340424 FAM19A2Q8N3H0 131 aa8.71□□□□□ -1.02
SIRPB3P-201ENST00000340424 ST20Q9HBF5 79 aa8.71□□□□□ -1.02
SIRPB3P-201ENST00000340424 FAM30AQ9NZY2 134 aa8.71□□□□□ -1.02
SIRPB3P-201ENST00000340424 ZNF25P17030 456 aaPredicted RBP8.7□□□□□ -1.02
SIRPB3P-201ENST00000340424 CAMPP49913 170 aa8.7□□□□□ -1.02
SIRPB3P-201ENST00000340424 AMMECR1LQ6DCA0 310 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms