RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ZFHX3Q15911 3703 aa6.8□□□□□ -1.32
NECAP1-201ENST00000339754 ANKHD1Q8IWZ3 2542 aaKnown RBP6.8□□□□□ -1.32
NECAP1-201ENST00000339754 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
NECAP1-201ENST00000339754 LINC00467Q9BRT7 94 aa6.8□□□□□ -1.32
NECAP1-201ENST00000339754 HRNRQ86YZ3 2850 aaPredicted RBP6.79□□□□□ -1.32
NECAP1-201ENST00000339754 C4orf26Q17RF5 130 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 SPINK13Q1W4C9 94 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 Q6ZSN1 163 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 DSCR8Q96T75 97 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 RS1O15537 224 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 Q5XG85 94 aa6.79□□□□□ -1.32
NECAP1-201ENST00000339754 Q6JHZ5 121 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 LINC01561Q8N1V8 128 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 A0A087WVE0 104 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 K7EMT4 169 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 GNLYP22749 145 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 HIST2H2BCQ6DN03 193 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 HIST2H2BDQ6DRA6 164 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 LINC00846Q9NV44 126 aa6.78□□□□□ -1.32
NECAP1-201ENST00000339754 ZNF415Q09FC8 603 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 COPS9Q8WXC6 57 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 OBSCN-AS1Q96MR7 158 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 IGHV3OR16-12A0A075B7B8 117 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 H3BUA1 57 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 PF4V1P10720 104 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 HOXD3P31249 432 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-201ENST00000339754 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
NECAP1-201ENST00000339754 LINC00242Q5T6M2 205 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 PIEZO1Q92508 2521 aa6.77□□□□□ -1.33
NECAP1-201ENST00000339754 A0A1W2PPR1 153 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 KNCNA6PVL3 124 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
NECAP1-201ENST00000339754 RBMY1CP0DJD4 496 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 RBMY1FQ15415 496 aaKnown RBP6.76□□□□□ -1.33
NECAP1-201ENST00000339754 RNF152Q8N8N0 203 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 C14orf132Q9NPU4 83 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 DOPEY2Q9Y3R5 2298 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 IGHV3-38A0A0C4DH36 116 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 SMIM1B2RUZ4 78 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 USP17L23D6RBM5 183 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 PIK3CD-AS1Q5SR53 167 aa6.76□□□□□ -1.33
NECAP1-201ENST00000339754 DNAL4O96015 105 aa6.75□□□□□ -1.33
NECAP1-201ENST00000339754 HRCT1Q6UXD1 115 aa6.75□□□□□ -1.33
NECAP1-201ENST00000339754 C19orf84I3L1E1 186 aa6.75□□□□□ -1.33
NECAP1-201ENST00000339754 K7EQG2 157 aa6.75□□□□□ -1.33
NECAP1-201ENST00000339754 IGLV1-40P01703 118 aa6.75□□□□□ -1.33
NECAP1-201ENST00000339754 PKD1L2Q7Z442 2459 aa6.75□□□□□ -1.33
NECAP1-201ENST00000339754 A0A087WYN8 130 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 F5H768 121 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 PRM2P04554 102 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 LMO4P61968 165 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 FAM19A3Q7Z5A8 133 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 HIVEP3Q5T1R4 2406 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 PF4P02776 101 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 HTN1P15515 57 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 SNRPD3P62318 126 aaKnown RBP6.74□□□□□ -1.33
NECAP1-201ENST00000339754 PIMREGQ9BSJ6 248 aa6.74□□□□□ -1.33
NECAP1-201ENST00000339754 SPTBN1Q01082 2364 aaKnown RBP6.74□□□□□ -1.33
NECAP1-201ENST00000339754 TRAV13-2A0A0B4J235 113 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 SYNJ2BPP57105 145 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 FHL2Q14192 279 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 LINC00337Q8N6G1 96 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 CACNA1AO00555 2505 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 IGKV2-28A0A075B6P5 120 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 IGKV2D-28P01615 120 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 BLCAPP62952 87 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 DGAT2L7PQ6IED9 249 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 SORL1Q92673 2214 aa6.73□□□□□ -1.33
NECAP1-201ENST00000339754 LY6EQ16553 131 aa6.72□□□□□ -1.33
NECAP1-201ENST00000339754 BRD3OSQ6XYD6 125 aa6.72□□□□□ -1.33
NECAP1-201ENST00000339754 SMIM11BQ8TCY0 68 aa6.72□□□□□ -1.33
NECAP1-201ENST00000339754 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
NECAP1-201ENST00000339754 IGHV3-53P01767 116 aa6.71□□□□□ -1.33
NECAP1-201ENST00000339754 CFHR3Q02985 330 aa6.71□□□□□ -1.34
NECAP1-201ENST00000339754 NCR3O14931 201 aa6.7□□□□□ -1.34
NECAP1-201ENST00000339754 CRPP02741 224 aa6.7□□□□□ -1.34
NECAP1-201ENST00000339754 C10orf105Q8TEF2 133 aa6.7□□□□□ -1.34
NECAP1-201ENST00000339754 Q96MF0 132 aa6.7□□□□□ -1.34
NECAP1-201ENST00000339754 CFAP46Q8IYW2 2715 aa6.7□□□□□ -1.34
NECAP1-201ENST00000339754 CELSR1Q9NYQ6 3014 aa6.7□□□□□ -1.34
NECAP1-201ENST00000339754 COL12A1Q99715 3063 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 A6NDX4 124 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 NDUFC2-KCTD14E9PQ53 114 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 H0YGX0 51 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 HILS1P60008 231 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 BPESC1Q9GZL8 116 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 SS18Q15532 418 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 SND1-IT1Q9HBX3 110 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 IGSF10Q6WRI0 2623 aa6.69□□□□□ -1.34
NECAP1-201ENST00000339754 NDUFC2O95298 119 aa6.68□□□□□ -1.34
NECAP1-201ENST00000339754 MIR7-3HGQ8N6C7 128 aa6.68□□□□□ -1.34
NECAP1-201ENST00000339754 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
NECAP1-201ENST00000339754 H3BUX3 64 aa6.68□□□□□ -1.34
NECAP1-201ENST00000339754 LECT2O14960 151 aa6.68□□□□□ -1.34
NECAP1-201ENST00000339754 CCKP06307 115 aa6.68□□□□□ -1.34
NECAP1-201ENST00000339754 MRAPQ8TCY5 172 aa6.68□□□□□ -1.34
NECAP1-201ENST00000339754 SLPIP03973 132 aa6.67□□□□□ -1.34
NECAP1-201ENST00000339754 RBMY1BA6NDE4 496 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms