RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 EDA2RQ9HAV5 297 aa14.77□□□□□ -0.05
RUNX3-202ENST00000338888 A6NDX4 124 aa14.76□□□□□ -0.05
RUNX3-202ENST00000338888 ZNF462Q96JM2 2506 aa14.76□□□□□ -0.05
RUNX3-202ENST00000338888 ABCA2Q9BZC7 2435 aa14.76□□□□□ -0.05
RUNX3-202ENST00000338888 CRYBG3Q68DQ2 2970 aa14.75□□□□□ -0.05
RUNX3-202ENST00000338888 EPG5Q9HCE0 2579 aa14.75□□□□□ -0.05
RUNX3-202ENST00000338888 LINC00526Q96FQ7 95 aa14.75□□□□□ -0.05
RUNX3-202ENST00000338888 DNAJC30Q96LL9 226 aa14.75□□□□□ -0.05
RUNX3-202ENST00000338888 TIRAPP58753 221 aa14.75□□□□□ -0.05
RUNX3-202ENST00000338888 BEAN1Q3B7T3 259 aa14.75□□□□□ -0.05
RUNX3-202ENST00000338888 NRGNQ92686 78 aa14.74□□□□□ -0.05
RUNX3-202ENST00000338888 C22orf24Q9Y442 160 aa14.74□□□□□ -0.05
RUNX3-202ENST00000338888 DOPEY1Q5JWR5 2465 aa14.74□□□□□ -0.05
RUNX3-202ENST00000338888 C10orf99Q6UWK7 81 aa14.74□□□□□ -0.05
RUNX3-202ENST00000338888 FAM218AQ96MZ4 157 aa14.74□□□□□ -0.05
RUNX3-202ENST00000338888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.74□□□□□ -0.05
RUNX3-202ENST00000338888 DGAT2L7PQ6IED9 249 aa14.73□□□□□ -0.05
RUNX3-202ENST00000338888 GAGE2AQ6NT46 116 aa14.73□□□□□ -0.05
RUNX3-202ENST00000338888 SDIM1Q6ZPB5 146 aa14.73□□□□□ -0.05
RUNX3-202ENST00000338888 BBC3Q96PG8 261 aaPredicted RBP14.73□□□□□ -0.05
RUNX3-202ENST00000338888 PEMTQ9UBM1 199 aa14.72□□□□□ -0.05
RUNX3-202ENST00000338888 IGLV5-45A0A087WSX0 123 aa14.72□□□□□ -0.05
RUNX3-202ENST00000338888 TRACP01848 142 aa14.72□□□□□ -0.05
RUNX3-202ENST00000338888 CFHR3Q02985 330 aa14.72□□□□□ -0.05
RUNX3-202ENST00000338888 C5orf38Q86SI9 138 aa14.72□□□□□ -0.05
RUNX3-202ENST00000338888 NACAE9PAV3 2078 aa14.71□□□□□ -0.05
RUNX3-202ENST00000338888 Q9HAA7 133 aa14.71□□□□□ -0.06
RUNX3-202ENST00000338888 SYNJ2BPP57105 145 aa14.7□□□□□ -0.06
RUNX3-202ENST00000338888 IGHV3OR16-12A0A075B7B8 117 aa14.7□□□□□ -0.06
RUNX3-202ENST00000338888 FAM208BQ5VWN6 2430 aa14.7□□□□□ -0.06
RUNX3-202ENST00000338888 COX7CP15954 63 aa14.69□□□□□ -0.06
RUNX3-202ENST00000338888 CSDC2Q9Y534 153 aaKnown RBP14.69□□□□□ -0.06
RUNX3-202ENST00000338888 ATP5G1P05496 136 aa14.69□□□□□ -0.06
RUNX3-202ENST00000338888 CXCL5P42830 114 aa14.69□□□□□ -0.06
RUNX3-202ENST00000338888 LINC00242Q5T6M2 205 aa14.69□□□□□ -0.06
RUNX3-202ENST00000338888 IGLV5-39A0A0G2JS06 123 aa14.68□□□□□ -0.06
RUNX3-202ENST00000338888 CREBBPQ92793 2442 aa14.68□□□□□ -0.06
RUNX3-202ENST00000338888 HOXD3P31249 432 aaPredicted RBP14.68□□□□□ -0.06
RUNX3-202ENST00000338888 PRIMA1Q86XR5 153 aa14.68□□□□□ -0.06
RUNX3-202ENST00000338888 PSMB8P28062 276 aa14.67□□□□□ -0.06
RUNX3-202ENST00000338888 PIK3CD-AS1Q5SR53 167 aa14.67□□□□□ -0.06
RUNX3-202ENST00000338888 CSMD2Q7Z408 3487 aa14.67□□□□□ -0.06
RUNX3-202ENST00000338888 C2orf48Q96LS8 159 aa14.67□□□□□ -0.06
RUNX3-202ENST00000338888 CENPEQ02224 2701 aa14.66□□□□□ -0.06
RUNX3-202ENST00000338888 IGHV4-61A0A0C4DH41 118 aa14.66□□□□□ -0.06
RUNX3-202ENST00000338888 CCL19Q99731 98 aa14.66□□□□□ -0.06
RUNX3-202ENST00000338888 LRRK2Q5S007 2527 aa14.66□□□□□ -0.06
RUNX3-202ENST00000338888 SMIM1B2RUZ4 78 aa14.65□□□□□ -0.06
RUNX3-202ENST00000338888 RS1O15537 224 aa14.65□□□□□ -0.06
RUNX3-202ENST00000338888 INAFM2P0DMQ5 153 aa14.65□□□□□ -0.06
RUNX3-202ENST00000338888 TRAV13-1A0A0B4J241 112 aa14.65□□□□□ -0.06
RUNX3-202ENST00000338888 RNF152Q8N8N0 203 aa14.65□□□□□ -0.06
RUNX3-202ENST00000338888 COPS9Q8WXC6 57 aa14.65□□□□□ -0.06
RUNX3-202ENST00000338888 MALP21145 153 aa14.64□□□□□ -0.07
RUNX3-202ENST00000338888 hADV29S1A0JD25 119 aa14.63□□□□□ -0.07
RUNX3-202ENST00000338888 J3KT08 172 aa14.63□□□□□ -0.07
RUNX3-202ENST00000338888 IGHV3-53P01767 116 aa14.63□□□□□ -0.07
RUNX3-202ENST00000338888 DEFB131AP59861 70 aa14.63□□□□□ -0.07
RUNX3-202ENST00000338888 FAM222AQ5U5X8 452 aa14.63□□□□□ -0.07
RUNX3-202ENST00000338888 CELSR2Q9HCU4 2923 aa14.63□□□□□ -0.07
RUNX3-202ENST00000338888 ZNF415Q09FC8 603 aa14.62□□□□□ -0.07
RUNX3-202ENST00000338888 FAM19A5Q7Z5A7 132 aaPredicted RBP14.62□□□□□ -0.07
RUNX3-202ENST00000338888 PIMREGQ9BSJ6 248 aa14.62□□□□□ -0.07
RUNX3-202ENST00000338888 RBMY1BA6NDE4 496 aaKnown RBP14.62□□□□□ -0.07
RUNX3-202ENST00000338888 RBMY1EA6NEQ0 496 aaKnown RBP14.62□□□□□ -0.07
RUNX3-202ENST00000338888 RBMY1DP0C7P1 496 aaKnown RBP14.62□□□□□ -0.07
RUNX3-202ENST00000338888 HIST2H2BCQ6DN03 193 aa14.62□□□□□ -0.07
RUNX3-202ENST00000338888 HIST2H2BDQ6DRA6 164 aa14.62□□□□□ -0.07
RUNX3-202ENST00000338888 LRRC75A-AS1Q8N1F1 130 aa14.62□□□□□ -0.07
RUNX3-202ENST00000338888 CRYGAP11844 174 aa14.61□□□□□ -0.07
RUNX3-202ENST00000338888 CYSTM1Q9H1C7 97 aa14.61□□□□□ -0.07
RUNX3-202ENST00000338888 ATOX1O00244 68 aa14.6□□□□□ -0.07
RUNX3-202ENST00000338888 ATP5J2P56134 94 aa14.6□□□□□ -0.07
RUNX3-202ENST00000338888 C9orf129Q5T035 196 aaKnown RBP14.6□□□□□ -0.07
RUNX3-202ENST00000338888 ZNF843Q8N446 348 aa14.6□□□□□ -0.07
RUNX3-202ENST00000338888 HIST1H4AP62805 103 aaKnown RBP14.6□□□□□ -0.07
RUNX3-202ENST00000338888 CSPG4Q6UVK1 2322 aa14.59□□□□□ -0.07
RUNX3-202ENST00000338888 POLQO75417 2590 aa14.59□□□□□ -0.07
RUNX3-202ENST00000338888 IGKV3D-7A0A0C4DH55 119 aa14.59□□□□□ -0.07
RUNX3-202ENST00000338888 A0A1B0GX51 115 aa14.58□□□□□ -0.08
RUNX3-202ENST00000338888 DNAL4O96015 105 aa14.58□□□□□ -0.08
RUNX3-202ENST00000338888 C14orf132Q9NPU4 83 aa14.58□□□□□ -0.08
RUNX3-202ENST00000338888 RPL28P46779 137 aaKnown RBP14.57□□□□□ -0.08
RUNX3-202ENST00000338888 A0A087WYN8 130 aa14.56□□□□□ -0.08
RUNX3-202ENST00000338888 LINC00337Q8N6G1 96 aa14.56□□□□□ -0.08
RUNX3-202ENST00000338888 C11orf72Q8NBR9 251 aa14.56□□□□□ -0.08
RUNX3-202ENST00000338888 SMIM9A6NGZ8 99 aa14.55□□□□□ -0.08
RUNX3-202ENST00000338888 AVPP01185 164 aa14.55□□□□□ -0.08
RUNX3-202ENST00000338888 CRPP02741 224 aa14.55□□□□□ -0.08
RUNX3-202ENST00000338888 IGHV4-30-2A0A087WSY4 118 aa14.55□□□□□ -0.08
RUNX3-202ENST00000338888 TRAV13-2A0A0B4J235 113 aa14.55□□□□□ -0.08
RUNX3-202ENST00000338888 F5H768 121 aa14.55□□□□□ -0.08
RUNX3-202ENST00000338888 IGHV4-59P01825 116 aa14.54□□□□□ -0.08
RUNX3-202ENST00000338888 RPL18AQ02543 176 aaKnown RBP14.54□□□□□ -0.08
RUNX3-202ENST00000338888 C5orf47Q569G3 176 aa14.54□□□□□ -0.08
RUNX3-202ENST00000338888 A0A087WVE0 104 aa14.54□□□□□ -0.08
RUNX3-202ENST00000338888 Q96MF0 132 aa14.54□□□□□ -0.08
RUNX3-202ENST00000338888 C10orf105Q8TEF2 133 aa14.53□□□□□ -0.08
RUNX3-202ENST00000338888 LINC00846Q9NV44 126 aa14.53□□□□□ -0.08
RUNX3-202ENST00000338888 UBR5O95071 2799 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms