RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
SEC13-201ENST00000337354 TRAV8-4A0A0B4J246 113 aa10.29□□□□□ -0.76
SEC13-201ENST00000337354 LINC00614P0C842 121 aa10.29□□□□□ -0.76
SEC13-201ENST00000337354 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
SEC13-201ENST00000337354 CYSLTR1Q9Y271 337 aa10.29□□□□□ -0.76
SEC13-201ENST00000337354 PYGO1Q9Y3Y4 419 aa10.29□□□□□ -0.76
SEC13-201ENST00000337354 RPL39P62891 51 aaKnown RBP10.28□□□□□ -0.76
SEC13-201ENST00000337354 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
SEC13-201ENST00000337354 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
SEC13-201ENST00000337354 AP5S1Q9NUS5 200 aa10.28□□□□□ -0.76
SEC13-201ENST00000337354 PSCAO43653 123 aa10.27□□□□□ -0.76
SEC13-201ENST00000337354 NPSP0C0P6 89 aa10.27□□□□□ -0.76
SEC13-201ENST00000337354 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
SEC13-201ENST00000337354 PRSS29PA6NIE9 313 aa10.26□□□□□ -0.77
SEC13-201ENST00000337354 MRPS36P82909 103 aaKnown RBP10.26□□□□□ -0.77
SEC13-201ENST00000337354 BIRC6Q9NR09 4857 aa10.26□□□□□ -0.77
SEC13-201ENST00000337354 DNAH10Q8IVF4 4471 aa10.26□□□□□ -0.77
SEC13-201ENST00000337354 CCL25O15444 150 aa10.26□□□□□ -0.77
SEC13-201ENST00000337354 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
SEC13-201ENST00000337354 CLPSL2Q6UWE3 100 aa10.25□□□□□ -0.77
SEC13-201ENST00000337354 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
SEC13-201ENST00000337354 URB1-AS1Q96HZ7 61 aa10.25□□□□□ -0.77
SEC13-201ENST00000337354 IGIPA6NJ69 53 aa10.24□□□□□ -0.77
SEC13-201ENST00000337354 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
SEC13-201ENST00000337354 BAGE3Q86Y29 109 aa10.24□□□□□ -0.77
SEC13-201ENST00000337354 FRAS1Q86XX4 4008 aa10.23□□□□□ -0.77
SEC13-201ENST00000337354 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
SEC13-201ENST00000337354 TNP2Q05952 138 aa10.23□□□□□ -0.77
SEC13-201ENST00000337354 SS18Q15532 418 aa10.23□□□□□ -0.77
SEC13-201ENST00000337354 ERASQ7Z444 233 aa10.23□□□□□ -0.77
SEC13-201ENST00000337354 TIMM17AQ99595 171 aa10.23□□□□□ -0.77
SEC13-201ENST00000337354 IGKV3OR2-268A0A0C4DH90 116 aa10.22□□□□□ -0.77
SEC13-201ENST00000337354 C1orf196B1AJZ1 125 aa10.22□□□□□ -0.77
SEC13-201ENST00000337354 EREGO14944 169 aa10.22□□□□□ -0.77
SEC13-201ENST00000337354 Q6ZN92 141 aa10.22□□□□□ -0.77
SEC13-201ENST00000337354 Q6ZUT4 128 aa10.22□□□□□ -0.77
SEC13-201ENST00000337354 FAM104AQ969W3 186 aa10.22□□□□□ -0.77
SEC13-201ENST00000337354 TMEM141Q96I45 108 aa10.22□□□□□ -0.77
SEC13-201ENST00000337354 IGLV10-54A0A075B6I4 117 aa10.21□□□□□ -0.78
SEC13-201ENST00000337354 IGLV4-3A0A075B6K6 122 aa10.21□□□□□ -0.78
SEC13-201ENST00000337354 SCGB3A1Q96QR1 104 aa10.21□□□□□ -0.78
SEC13-201ENST00000337354 A0A087WTM6 91 aa10.2□□□□□ -0.78
SEC13-201ENST00000337354 LRCOL1A6NCL2 159 aa10.2□□□□□ -0.78
SEC13-201ENST00000337354 HBDP02042 147 aa10.2□□□□□ -0.78
SEC13-201ENST00000337354 KRTAP26-1Q6PEX3 210 aa10.2□□□□□ -0.78
SEC13-201ENST00000337354 TEX43Q6ZNM6 134 aa10.2□□□□□ -0.78
SEC13-201ENST00000337354 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
SEC13-201ENST00000337354 CHCHD10Q8WYQ3 142 aaPredicted RBP10.2□□□□□ -0.78
SEC13-201ENST00000337354 OPRPNQ99935 248 aaPredicted RBP10.2□□□□□ -0.78
SEC13-201ENST00000337354 VCX2Q9H322 139 aa10.2□□□□□ -0.78
SEC13-201ENST00000337354 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
SEC13-201ENST00000337354 A0A096LNJ9 63 aa10.18□□□□□ -0.78
SEC13-201ENST00000337354 TRAV13-1A0A0B4J241 112 aa10.18□□□□□ -0.78
SEC13-201ENST00000337354 HSBP1O75506 76 aa10.18□□□□□ -0.78
SEC13-201ENST00000337354 AMELXQ99217 191 aa10.18□□□□□ -0.78
SEC13-201ENST00000337354 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
SEC13-201ENST00000337354 DNAH2Q9P225 4427 aa10.18□□□□□ -0.78
SEC13-201ENST00000337354 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 IFITM10A6NMD0 228 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BKO60814 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BJP06899 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BOP23527 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BBP33778 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BDP58876 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BCP62807 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST2H2BEQ16778 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.17□□□□□ -0.78
SEC13-201ENST00000337354 CD164L2Q6UWJ8 174 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 BAALCQ8WXS3 180 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BHQ93079 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BNQ99877 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 HIST1H2BMQ99879 126 aa10.17□□□□□ -0.78
SEC13-201ENST00000337354 A0A1B0GVY2 172 aa10.16□□□□□ -0.78
SEC13-201ENST00000337354 XCL1P47992 114 aa10.16□□□□□ -0.78
SEC13-201ENST00000337354 PDZD11Q5EBL8 140 aa10.16□□□□□ -0.78
SEC13-201ENST00000337354 ATP5LO75964 103 aa10.15□□□□□ -0.78
SEC13-201ENST00000337354 PMCHL1Q16048 86 aa10.15□□□□□ -0.78
SEC13-201ENST00000337354 C14orf177Q52M58 125 aa10.15□□□□□ -0.78
SEC13-201ENST00000337354 SERF1AO75920 110 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 FOXI1Q12951 378 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 Q8N814 137 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 HECTD4Q9Y4D8 3996 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 UBE2D1P51668 147 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 SEC11AP67812 179 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 LINC00173Q6ZV60 143 aa10.14□□□□□ -0.79
SEC13-201ENST00000337354 DNAH17Q9UFH2 4485 aa10.13□□□□□ -0.79
SEC13-201ENST00000337354 LINC00310P59036 64 aa10.13□□□□□ -0.79
SEC13-201ENST00000337354 PMVKQ15126 192 aa10.13□□□□□ -0.79
SEC13-201ENST00000337354 FAM19A3Q7Z5A8 133 aa10.13□□□□□ -0.79
SEC13-201ENST00000337354 USP17L23D6RBM5 183 aa10.12□□□□□ -0.79
SEC13-201ENST00000337354 LECT2O14960 151 aa10.12□□□□□ -0.79
SEC13-201ENST00000337354 WFDC2Q14508 124 aa10.12□□□□□ -0.79
SEC13-201ENST00000337354 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
SEC13-201ENST00000337354 FAM19A2Q8N3H0 131 aa10.12□□□□□ -0.79
SEC13-201ENST00000337354 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
SEC13-201ENST00000337354 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
SEC13-201ENST00000337354 IGHV3OR16-9A0A0B4J2B5 98 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms