RNA–Protein interactions for RNA: ENST00000336840.10

PAX3-202, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-202ENST00000336840 Q6ZUT4 128 aa8.66□□□□□ -1.02
PAX3-202ENST00000336840 AMELXQ99217 191 aa8.66□□□□□ -1.02
PAX3-202ENST00000336840 IGLL5B9A064 214 aa8.65□□□□□ -1.02
PAX3-202ENST00000336840 DGAT2L7PQ6IED9 249 aa8.65□□□□□ -1.02
PAX3-202ENST00000336840 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 PRSS29PA6NIE9 313 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 ESRGQ1W209 222 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 ZC2HC1BQ5TFG8 222 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 OR5A1Q8NGJ0 315 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 TMEM101Q96IK0 257 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 VCX2Q9H322 139 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 CST9LQ9H4G1 147 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 CDC42SE2Q9NRR3 84 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 F8VRH5 84 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 PKIAP61925 76 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 CDPF1Q6NVV7 123 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
PAX3-202ENST00000336840 NUPR2A6NF83 97 aa8.63□□□□□ -1.03
PAX3-202ENST00000336840 MPV17L2Q567V2 206 aa8.63□□□□□ -1.03
PAX3-202ENST00000336840 LINC00518Q8N0U6 118 aa8.63□□□□□ -1.03
PAX3-202ENST00000336840 ZNF664Q8N3J9 261 aa8.63□□□□□ -1.03
PAX3-202ENST00000336840 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
PAX3-202ENST00000336840 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
PAX3-202ENST00000336840 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
PAX3-202ENST00000336840 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
PAX3-202ENST00000336840 RBX1P62877 108 aa8.63□□□□□ -1.03
PAX3-202ENST00000336840 RNASE13Q5GAN3 156 aaKnown RBP8.63□□□□□ -1.03
PAX3-202ENST00000336840 TMEM262E9PQX1 116 aa8.62□□□□□ -1.03
PAX3-202ENST00000336840 C12orf57Q99622 126 aa8.62□□□□□ -1.03
PAX3-202ENST00000336840 C2orf88Q9BSF0 95 aa8.62□□□□□ -1.03
PAX3-202ENST00000336840 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
PAX3-202ENST00000336840 DPM2O94777 84 aa8.61□□□□□ -1.03
PAX3-202ENST00000336840 IGKCP01834 107 aa8.61□□□□□ -1.03
PAX3-202ENST00000336840 PLNP26678 52 aa8.61□□□□□ -1.03
PAX3-202ENST00000336840 WFDC10BQ8IUB3 73 aa8.61□□□□□ -1.03
PAX3-202ENST00000336840 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
PAX3-202ENST00000336840 APLNQ9ULZ1 77 aa8.61□□□□□ -1.03
PAX3-202ENST00000336840 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
PAX3-202ENST00000336840 TGP01266 2768 aa8.6□□□□□ -1.03
PAX3-202ENST00000336840 LYSTQ99698 3801 aa8.6□□□□□ -1.03
PAX3-202ENST00000336840 IGLC3P0DOY3 106 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 UBE2D1P51668 147 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 TCTAP57738 103 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 Q8N3U1 123 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
PAX3-202ENST00000336840 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 DNAH1Q9P2D7 4330 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 CCL18P55774 89 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
PAX3-202ENST00000336840 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.04
PAX3-202ENST00000336840 UPK3BQ9BT76 320 aa8.58□□□□□ -1.04
PAX3-202ENST00000336840 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
PAX3-202ENST00000336840 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
PAX3-202ENST00000336840 S100A12P80511 92 aa8.58□□□□□ -1.04
PAX3-202ENST00000336840 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
PAX3-202ENST00000336840 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
PAX3-202ENST00000336840 A0A0J9YXV3 536 aa8.57□□□□□ -1.04
PAX3-202ENST00000336840 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
PAX3-202ENST00000336840 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
PAX3-202ENST00000336840 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
PAX3-202ENST00000336840 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
PAX3-202ENST00000336840 MAJINQ3KP22 176 aa8.56□□□□□ -1.04
PAX3-202ENST00000336840 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
PAX3-202ENST00000336840 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
PAX3-202ENST00000336840 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
PAX3-202ENST00000336840 SEC11AP67812 179 aa8.55□□□□□ -1.04
PAX3-202ENST00000336840 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
PAX3-202ENST00000336840 MUC7Q8TAX7 377 aa8.55□□□□□ -1.04
PAX3-202ENST00000336840 WWC2-AS2Q96NR7 200 aa8.55□□□□□ -1.04
PAX3-202ENST00000336840 PRR34Q9NV39 138 aa8.55□□□□□ -1.04
PAX3-202ENST00000336840 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
PAX3-202ENST00000336840 LINC00959A0A1B0GUT2 108 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 HSBP1L1C9JCN9 74 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
PAX3-202ENST00000336840 HERVK_113P63121 156 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 ZFAND6Q6FIF0 208 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 IGLV5-45A0A087WSX0 123 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 IGKV3OR2-268A0A0C4DH90 116 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 SIVA1O15304 175 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 CCL25O15444 150 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 REG3AQ06141 175 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 SPATA45Q537H7 98 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 CLPSL2Q6UWE3 100 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 STPG4Q8N801 248 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
PAX3-202ENST00000336840 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
PAX3-202ENST00000336840 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
PAX3-202ENST00000336840 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
PAX3-202ENST00000336840 COX6A2Q02221 97 aa8.53□□□□□ -1.04
PAX3-202ENST00000336840 TMEM170BQ5T4T1 132 aa8.53□□□□□ -1.04
PAX3-202ENST00000336840 SS18Q15532 418 aa8.52□□□□□ -1.05
PAX3-202ENST00000336840 TMEM223A0PJW6 202 aa8.51□□□□□ -1.05
PAX3-202ENST00000336840 ENHOQ6UWT2 76 aa8.51□□□□□ -1.05
PAX3-202ENST00000336840 LINC00469Q8N7U9 141 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms