RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
HLCS-201ENST00000336648 LY6LH3BQJ8 138 aa9.74□□□□□ -0.85
HLCS-201ENST00000336648 BRWD1-AS2P59051 145 aa9.74□□□□□ -0.85
HLCS-201ENST00000336648 TRAV10A0A0B4J240 114 aa9.74□□□□□ -0.85
HLCS-201ENST00000336648 CLUHP3Q96NS8 147 aa9.74□□□□□ -0.85
HLCS-201ENST00000336648 C6orf99Q4VX62 202 aa9.73□□□□□ -0.85
HLCS-201ENST00000336648 LRCOL1A6NCL2 159 aa9.73□□□□□ -0.85
HLCS-201ENST00000336648 COX17Q14061 63 aa9.73□□□□□ -0.85
HLCS-201ENST00000336648 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
HLCS-201ENST00000336648 NBASA2RRP1 2371 aa9.72□□□□□ -0.85
HLCS-201ENST00000336648 XGP55808 180 aa9.72□□□□□ -0.85
HLCS-201ENST00000336648 RNF185Q96GF1 192 aa9.72□□□□□ -0.85
HLCS-201ENST00000336648 A0A1W2PNU3 283 aaPredicted RBP9.72□□□□□ -0.85
HLCS-201ENST00000336648 Q6ZVQ6 151 aa9.72□□□□□ -0.85
HLCS-201ENST00000336648 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
HLCS-201ENST00000336648 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
HLCS-201ENST00000336648 PRORYQ9H606 182 aa9.72□□□□□ -0.85
HLCS-201ENST00000336648 LST1O00453 97 aa9.71□□□□□ -0.85
HLCS-201ENST00000336648 SPINK6Q6UWN8 80 aa9.71□□□□□ -0.85
HLCS-201ENST00000336648 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.86
HLCS-201ENST00000336648 SHANK1Q9Y566 2161 aa9.71□□□□□ -0.86
HLCS-201ENST00000336648 ZNF295-AS1Q8N0V1 137 aa9.7□□□□□ -0.86
HLCS-201ENST00000336648 PSMG3-AS1Q96PY0 264 aa9.7□□□□□ -0.86
HLCS-201ENST00000336648 MAPKAPK5-AS1Q8N8E1 139 aa9.7□□□□□ -0.86
HLCS-201ENST00000336648 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
HLCS-201ENST00000336648 PRYO14603 147 aa9.7□□□□□ -0.86
HLCS-201ENST00000336648 LELP1Q5T871 98 aa9.7□□□□□ -0.86
HLCS-201ENST00000336648 DCANP1Q8TF63 244 aa9.7□□□□□ -0.86
HLCS-201ENST00000336648 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.69□□□□□ -0.86
HLCS-201ENST00000336648 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
HLCS-201ENST00000336648 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.69□□□□□ -0.86
HLCS-201ENST00000336648 ZGRF1Q86YA3 2104 aa9.69□□□□□ -0.86
HLCS-201ENST00000336648 C22orf34Q6ZV56 151 aa9.69□□□□□ -0.86
HLCS-201ENST00000336648 TRBV7-6A0A0J9YX20 115 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 Q6ZQY7 126 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 LINC00474Q9P2X8 69 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 CRIP1P50238 77 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 UBE2D1P51668 147 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 Q6ZSV7 163 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 TSHBP01222 138 aa9.68□□□□□ -0.86
HLCS-201ENST00000336648 PCNX1Q96RV3 2341 aa9.67□□□□□ -0.86
HLCS-201ENST00000336648 Q8N976 141 aa9.67□□□□□ -0.86
HLCS-201ENST00000336648 XAGE1AQ9HD64 81 aa9.67□□□□□ -0.86
HLCS-201ENST00000336648 DYSFO75923 2080 aa9.67□□□□□ -0.86
HLCS-201ENST00000336648 NRACQ8N912 160 aa9.66□□□□□ -0.86
HLCS-201ENST00000336648 PSPHP1O15172 72 aa9.66□□□□□ -0.86
HLCS-201ENST00000336648 KLLNB2CW77 178 aa9.66□□□□□ -0.86
HLCS-201ENST00000336648 YPEL4Q96NS1 127 aa9.65□□□□□ -0.86
HLCS-201ENST00000336648 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
HLCS-201ENST00000336648 C11orf71Q6IPW1 123 aa9.65□□□□□ -0.86
HLCS-201ENST00000336648 Q6ZPA2 131 aa9.65□□□□□ -0.86
HLCS-201ENST00000336648 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
HLCS-201ENST00000336648 Q8IZM0 81 aa9.65□□□□□ -0.87
HLCS-201ENST00000336648 Q8N6K4 173 aa9.65□□□□□ -0.87
HLCS-201ENST00000336648 LINC00208Q96KT6 92 aa9.65□□□□□ -0.87
HLCS-201ENST00000336648 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
HLCS-201ENST00000336648 POLR2KP53803 58 aaKnown RBP9.64□□□□□ -0.87
HLCS-201ENST00000336648 PPDPFQ9H3Y8 114 aa9.64□□□□□ -0.87
HLCS-201ENST00000336648 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
HLCS-201ENST00000336648 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
HLCS-201ENST00000336648 UBE2D3P61077 147 aa9.64□□□□□ -0.87
HLCS-201ENST00000336648 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
HLCS-201ENST00000336648 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
HLCS-201ENST00000336648 OBSL1O75147 1896 aa9.64□□□□□ -0.87
HLCS-201ENST00000336648 NANOS2P60321 138 aaKnown RBP9.63□□□□□ -0.87
HLCS-201ENST00000336648 RNASE3P12724 160 aaKnown RBP9.63□□□□□ -0.87
HLCS-201ENST00000336648 BBC3Q96PG8 261 aaPredicted RBP9.63□□□□□ -0.87
HLCS-201ENST00000336648 DENND4AQ7Z401 1863 aa9.63□□□□□ -0.87
HLCS-201ENST00000336648 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
HLCS-201ENST00000336648 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
HLCS-201ENST00000336648 CRIP3Q6Q6R5 217 aa9.63□□□□□ -0.87
HLCS-201ENST00000336648 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
HLCS-201ENST00000336648 ZNF73O43830 326 aaPredicted RBP9.62□□□□□ -0.87
HLCS-201ENST00000336648 ESRGQ1W209 222 aa9.62□□□□□ -0.87
HLCS-201ENST00000336648 CNFNQ9BYD5 112 aa9.62□□□□□ -0.87
HLCS-201ENST00000336648 ZNF702PQ9H963 129 aa9.62□□□□□ -0.87
HLCS-201ENST00000336648 C19orf84I3L1E1 186 aa9.61□□□□□ -0.87
HLCS-201ENST00000336648 DENND4CQ5VZ89 1909 aa9.61□□□□□ -0.87
HLCS-201ENST00000336648 PLXNB3Q9ULL4 1909 aa9.61□□□□□ -0.87
HLCS-201ENST00000336648 KPRPQ5T749 579 aaPredicted RBP9.61□□□□□ -0.87
HLCS-201ENST00000336648 POM121L12Q8N7R1 296 aa9.61□□□□□ -0.87
HLCS-201ENST00000336648 PCNX2A6NKB5 2137 aa9.61□□□□□ -0.87
HLCS-201ENST00000336648 BEAN1Q3B7T3 259 aa9.61□□□□□ -0.87
HLCS-201ENST00000336648 NOTCH4Q99466 2003 aa9.61□□□□□ -0.87
HLCS-201ENST00000336648 PRO0628Q9UI54 55 aa9.6□□□□□ -0.87
HLCS-201ENST00000336648 A8MZ25 164 aa9.6□□□□□ -0.87
HLCS-201ENST00000336648 C2orf91Q6ZV80 131 aa9.6□□□□□ -0.87
HLCS-201ENST00000336648 MED13LQ71F56 2210 aa9.6□□□□□ -0.87
HLCS-201ENST00000336648 IGLV1-40P01703 118 aa9.59□□□□□ -0.87
HLCS-201ENST00000336648 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
HLCS-201ENST00000336648 COL4A3Q01955 1670 aa9.59□□□□□ -0.87
HLCS-201ENST00000336648 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.87
HLCS-201ENST00000336648 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
HLCS-201ENST00000336648 WISP2O76076 250 aa9.58□□□□□ -0.88
HLCS-201ENST00000336648 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
HLCS-201ENST00000336648 PROK1P58294 105 aa9.58□□□□□ -0.88
HLCS-201ENST00000336648 TMEM131Q92545 1883 aa9.58□□□□□ -0.88
HLCS-201ENST00000336648 LINC00482Q8N8I6 264 aa9.58□□□□□ -0.88
HLCS-201ENST00000336648 INAFM1C9JVW0 142 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms