RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 EPPK1P58107 5090 aaKnown RBP17.28■□□□□ 0.36
SMDT1-201ENST00000331479 DGAT2L7PQ6IED9 249 aa17.28■□□□□ 0.36
SMDT1-201ENST00000331479 TIMM21Q9BVV7 248 aa17.28■□□□□ 0.36
SMDT1-201ENST00000331479 HECTD4Q9Y4D8 3996 aa17.27■□□□□ 0.36
SMDT1-201ENST00000331479 IGKV3OR2-268A0A0C4DH90 116 aa17.27■□□□□ 0.35
SMDT1-201ENST00000331479 LINC01546A6NGU7 62 aa17.27■□□□□ 0.35
SMDT1-201ENST00000331479 PSCAO43653 123 aa17.27■□□□□ 0.35
SMDT1-201ENST00000331479 ZNF664Q8N3J9 261 aa17.27■□□□□ 0.35
SMDT1-201ENST00000331479 MAPKAPK5-AS1Q8N8E1 139 aa17.27■□□□□ 0.35
SMDT1-201ENST00000331479 TM2D2Q9BX73 214 aa17.27■□□□□ 0.35
SMDT1-201ENST00000331479 FAM104AQ969W3 186 aa17.26■□□□□ 0.35
SMDT1-201ENST00000331479 RMI2Q96E14 147 aa17.26■□□□□ 0.35
SMDT1-201ENST00000331479 URB1-AS1Q96HZ7 61 aa17.26■□□□□ 0.35
SMDT1-201ENST00000331479 C1orf43Q9BWL3 253 aa17.26■□□□□ 0.35
SMDT1-201ENST00000331479 IGLV10-54A0A075B6I4 117 aa17.25■□□□□ 0.35
SMDT1-201ENST00000331479 SMAGPQ0VAQ4 97 aa17.25■□□□□ 0.35
SMDT1-201ENST00000331479 RNASE13Q5GAN3 156 aaKnown RBP17.25■□□□□ 0.35
SMDT1-201ENST00000331479 C2orf66Q6UXQ4 117 aa17.25■□□□□ 0.35
SMDT1-201ENST00000331479 FA2HQ7L5A8 372 aa17.25■□□□□ 0.35
SMDT1-201ENST00000331479 Q6ZUT4 128 aa17.24■□□□□ 0.35
SMDT1-201ENST00000331479 OPRPNQ99935 248 aaPredicted RBP17.24■□□□□ 0.35
SMDT1-201ENST00000331479 SPANXA1Q9NS26 97 aa17.24■□□□□ 0.35
SMDT1-201ENST00000331479 CYSLTR1Q9Y271 337 aa17.23■□□□□ 0.35
SMDT1-201ENST00000331479 KRTAP26-1Q6PEX3 210 aa17.23■□□□□ 0.35
SMDT1-201ENST00000331479 COX11Q9Y6N1 276 aa17.23■□□□□ 0.35
SMDT1-201ENST00000331479 A0A1B0GVY2 172 aa17.22■□□□□ 0.35
SMDT1-201ENST00000331479 LRCOL1A6NCL2 159 aa17.21■□□□□ 0.35
SMDT1-201ENST00000331479 LINC00614P0C842 121 aa17.21■□□□□ 0.35
SMDT1-201ENST00000331479 A0A087WTM6 91 aa17.2■□□□□ 0.34
SMDT1-201ENST00000331479 TRAV8-4A0A0B4J246 113 aa17.2■□□□□ 0.34
SMDT1-201ENST00000331479 PYGO1Q9Y3Y4 419 aa17.2■□□□□ 0.34
SMDT1-201ENST00000331479 AP5S1Q9NUS5 200 aa17.19■□□□□ 0.34
SMDT1-201ENST00000331479 MRPS36P82909 103 aaKnown RBP17.19■□□□□ 0.34
SMDT1-201ENST00000331479 WFDC2Q14508 124 aa17.19■□□□□ 0.34
SMDT1-201ENST00000331479 TOMM6Q96B49 74 aa17.19■□□□□ 0.34
SMDT1-201ENST00000331479 PKHD1P08F94 4074 aa17.18■□□□□ 0.34
SMDT1-201ENST00000331479 LINC00959A0A1B0GUT2 108 aa17.18■□□□□ 0.34
SMDT1-201ENST00000331479 BAALCQ8WXS3 180 aa17.18■□□□□ 0.34
SMDT1-201ENST00000331479 IGLV4-3A0A075B6K6 122 aa17.17■□□□□ 0.34
SMDT1-201ENST00000331479 IGIPA6NJ69 53 aa17.17■□□□□ 0.34
SMDT1-201ENST00000331479 G0S2P27469 103 aa17.17■□□□□ 0.34
SMDT1-201ENST00000331479 LECT2O14960 151 aa17.16■□□□□ 0.34
SMDT1-201ENST00000331479 RAB5BP61020 215 aa17.15■□□□□ 0.34
SMDT1-201ENST00000331479 CHCHD10Q8WYQ3 142 aaPredicted RBP17.15■□□□□ 0.34
SMDT1-201ENST00000331479 A0A096LNJ9 63 aa17.15■□□□□ 0.34
SMDT1-201ENST00000331479 DNAH5Q8TE73 4624 aa17.14■□□□□ 0.33
SMDT1-201ENST00000331479 PMCHL1Q16048 86 aa17.14■□□□□ 0.33
SMDT1-201ENST00000331479 TRAV13-1A0A0B4J241 112 aa17.13■□□□□ 0.33
SMDT1-201ENST00000331479 GAGE12HA6NDE8 117 aa17.13■□□□□ 0.33
SMDT1-201ENST00000331479 TMEM141Q96I45 108 aa17.13■□□□□ 0.33
SMDT1-201ENST00000331479 CCL25O15444 150 aa17.12■□□□□ 0.33
SMDT1-201ENST00000331479 XCL1P47992 114 aa17.12■□□□□ 0.33
SMDT1-201ENST00000331479 ZC2HC1BQ5TFG8 222 aa17.12■□□□□ 0.33
SMDT1-201ENST00000331479 SS18Q15532 418 aa17.11■□□□□ 0.33
SMDT1-201ENST00000331479 BAGE3Q86Y29 109 aa17.11■□□□□ 0.33
SMDT1-201ENST00000331479 SCGB3A1Q96QR1 104 aa17.11■□□□□ 0.33
SMDT1-201ENST00000331479 ERASQ7Z444 233 aa17.11■□□□□ 0.33
SMDT1-201ENST00000331479 TIMM17AQ99595 171 aa17.11■□□□□ 0.33
SMDT1-201ENST00000331479 DYNC1H1Q14204 4646 aaKnown RBP17.1■□□□□ 0.33
SMDT1-201ENST00000331479 EREGO14944 169 aa17.1■□□□□ 0.33
SMDT1-201ENST00000331479 FUSP35637 526 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMDT1-201ENST00000331479 KRTAP10-2P60368 255 aa17.1■□□□□ 0.33
SMDT1-201ENST00000331479 CHCHD1Q96BP2 118 aaKnown RBP17.1■□□□□ 0.33
SMDT1-201ENST00000331479 IFITM10A6NMD0 228 aa17.09■□□□□ 0.33
SMDT1-201ENST00000331479 C1orf196B1AJZ1 125 aa17.09■□□□□ 0.33
SMDT1-201ENST00000331479 NPSP0C0P6 89 aa17.09■□□□□ 0.33
SMDT1-201ENST00000331479 FOXI1Q12951 378 aa17.09■□□□□ 0.33
SMDT1-201ENST00000331479 LINC00173Q6ZV60 143 aa17.09■□□□□ 0.33
SMDT1-201ENST00000331479 SPATA12Q7Z6I5 190 aa17.09■□□□□ 0.33
SMDT1-201ENST00000331479 Q8N814 137 aa17.09■□□□□ 0.33
SMDT1-201ENST00000331479 HBDP02042 147 aa17.08■□□□□ 0.32
SMDT1-201ENST00000331479 AMELXQ99217 191 aa17.08■□□□□ 0.32
SMDT1-201ENST00000331479 LINC00310P59036 64 aa17.07■□□□□ 0.32
SMDT1-201ENST00000331479 Q6ZN92 141 aa17.07■□□□□ 0.32
SMDT1-201ENST00000331479 TEX43Q6ZNM6 134 aa17.07■□□□□ 0.32
SMDT1-201ENST00000331479 VCX2Q9H322 139 aa17.07■□□□□ 0.32
SMDT1-201ENST00000331479 LINC01549A6NIU2 74 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 USP17L23D6RBM5 183 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BKO60814 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BJP06899 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BOP23527 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BBP33778 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BDP58876 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BCP62807 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST2H2BEQ16778 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.06■□□□□ 0.32
SMDT1-201ENST00000331479 CD164L2Q6UWJ8 174 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BHQ93079 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BNQ99877 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 HIST1H2BMQ99879 126 aa17.06■□□□□ 0.32
SMDT1-201ENST00000331479 SERF1AO75920 110 aa17.05■□□□□ 0.32
SMDT1-201ENST00000331479 PDZD11Q5EBL8 140 aa17.04■□□□□ 0.32
SMDT1-201ENST00000331479 NUPR1O60356 82 aa17.03■□□□□ 0.32
SMDT1-201ENST00000331479 UBE2D1P51668 147 aa17.02■□□□□ 0.32
SMDT1-201ENST00000331479 PAPPA-AS1Q5QFB9 102 aa17.02■□□□□ 0.32
SMDT1-201ENST00000331479 FAM19A2Q8N3H0 131 aa17.02■□□□□ 0.32
SMDT1-201ENST00000331479 C2orf88Q9BSF0 95 aa17.02■□□□□ 0.32
SMDT1-201ENST00000331479 HSBP1O75506 76 aa17.02■□□□□ 0.31
SMDT1-201ENST00000331479 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.01■□□□□ 0.31
SMDT1-201ENST00000331479 LRP1BQ9NZR2 4599 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms