RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 DUX5Q96PT3 197 aa10.53□□□□□ -0.72
SNX20-202ENST00000330943 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.72
SNX20-202ENST00000330943 IGHV3-38A0A0C4DH36 116 aa10.52□□□□□ -0.72
SNX20-202ENST00000330943 SYNJ2BPP57105 145 aa10.52□□□□□ -0.72
SNX20-202ENST00000330943 DEFB121Q5J5C9 76 aa10.52□□□□□ -0.72
SNX20-202ENST00000330943 PRORYQ9H606 182 aa10.52□□□□□ -0.72
SNX20-202ENST00000330943 SPANXA1Q9NS26 97 aa10.52□□□□□ -0.72
SNX20-202ENST00000330943 CDKN2A-AS1Q9UH64 79 aa10.52□□□□□ -0.72
SNX20-202ENST00000330943 PSMB8P28062 276 aa10.52□□□□□ -0.73
SNX20-202ENST00000330943 Q6ZSN1 163 aa10.52□□□□□ -0.73
SNX20-202ENST00000330943 LINC00467Q9BRT7 94 aa10.52□□□□□ -0.73
SNX20-202ENST00000330943 JMJD1CQ15652 2540 aa10.51□□□□□ -0.73
SNX20-202ENST00000330943 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
SNX20-202ENST00000330943 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
SNX20-202ENST00000330943 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
SNX20-202ENST00000330943 C3orf56Q8N813 242 aa10.51□□□□□ -0.73
SNX20-202ENST00000330943 PIMREGQ9BSJ6 248 aa10.51□□□□□ -0.73
SNX20-202ENST00000330943 TENM4Q6N022 2769 aa10.5□□□□□ -0.73
SNX20-202ENST00000330943 TIMM17BO60830 172 aa10.5□□□□□ -0.73
SNX20-202ENST00000330943 HERV-K104P63124 156 aa10.5□□□□□ -0.73
SNX20-202ENST00000330943 ZNF625Q96I27 306 aaPredicted RBP10.5□□□□□ -0.73
SNX20-202ENST00000330943 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
SNX20-202ENST00000330943 TRBV7-7A0A0K0K1E9 115 aa10.49□□□□□ -0.73
SNX20-202ENST00000330943 TMEM101Q96IK0 257 aa10.49□□□□□ -0.73
SNX20-202ENST00000330943 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
SNX20-202ENST00000330943 NDUFA1O15239 70 aa10.49□□□□□ -0.73
SNX20-202ENST00000330943 FAM110AQ9BQ89 295 aa10.49□□□□□ -0.73
SNX20-202ENST00000330943 CIRBPQ14011 172 aaKnown RBP10.48□□□□□ -0.73
SNX20-202ENST00000330943 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.48□□□□□ -0.73
SNX20-202ENST00000330943 ITPR3Q14573 2671 aa10.48□□□□□ -0.73
SNX20-202ENST00000330943 IGHV4-30-2A0A087WSY4 118 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 ATP5J2P56134 94 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 HIST2H2BDQ6DRA6 164 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 LINC00308Q8TCZ7 52 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 Q9H8V8 135 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 FASNP49327 2511 aaKnown RBP10.47□□□□□ -0.73
SNX20-202ENST00000330943 DGAT2L7PQ6IED9 249 aa10.47□□□□□ -0.73
SNX20-202ENST00000330943 COX6A2Q02221 97 aa10.46□□□□□ -0.73
SNX20-202ENST00000330943 COX7A2LO14548 114 aa10.46□□□□□ -0.74
SNX20-202ENST00000330943 AVPP01185 164 aa10.46□□□□□ -0.74
SNX20-202ENST00000330943 IGHV4-59P01825 116 aa10.46□□□□□ -0.74
SNX20-202ENST00000330943 DEFB131AP59861 70 aa10.46□□□□□ -0.74
SNX20-202ENST00000330943 CCL19Q99731 98 aa10.46□□□□□ -0.74
SNX20-202ENST00000330943 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
SNX20-202ENST00000330943 UBR5O95071 2799 aaPredicted RBP10.45□□□□□ -0.74
SNX20-202ENST00000330943 MSMBP08118 114 aa10.45□□□□□ -0.74
SNX20-202ENST00000330943 Q8N2B8 174 aa10.45□□□□□ -0.74
SNX20-202ENST00000330943 RNF152Q8N8N0 203 aa10.45□□□□□ -0.74
SNX20-202ENST00000330943 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
SNX20-202ENST00000330943 C2CD3Q4AC94 2353 aa10.44□□□□□ -0.74
SNX20-202ENST00000330943 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
SNX20-202ENST00000330943 TIRAPP58753 221 aa10.44□□□□□ -0.74
SNX20-202ENST00000330943 SMCR5Q8TEV8 140 aa10.44□□□□□ -0.74
SNX20-202ENST00000330943 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
SNX20-202ENST00000330943 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
SNX20-202ENST00000330943 ACYP1P07311 99 aa10.44□□□□□ -0.74
SNX20-202ENST00000330943 RBMY1BA6NDE4 496 aaKnown RBP10.43□□□□□ -0.74
SNX20-202ENST00000330943 RBMY1EA6NEQ0 496 aaKnown RBP10.43□□□□□ -0.74
SNX20-202ENST00000330943 RBMY1DP0C7P1 496 aaKnown RBP10.43□□□□□ -0.74
SNX20-202ENST00000330943 SOSTDC1Q6X4U4 206 aa10.43□□□□□ -0.74
SNX20-202ENST00000330943 IGHV3OR16-12A0A075B7B8 117 aa10.43□□□□□ -0.74
SNX20-202ENST00000330943 DAZ2Q13117 558 aaKnown RBP10.43□□□□□ -0.74
SNX20-202ENST00000330943 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
SNX20-202ENST00000330943 LINC01587Q99440 93 aa10.43□□□□□ -0.74
SNX20-202ENST00000330943 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
SNX20-202ENST00000330943 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
SNX20-202ENST00000330943 AKAP9Q99996 3911 aa10.41□□□□□ -0.74
SNX20-202ENST00000330943 NDUFA7O95182 113 aa10.41□□□□□ -0.74
SNX20-202ENST00000330943 LINC00242Q5T6M2 205 aa10.41□□□□□ -0.74
SNX20-202ENST00000330943 IGLV5-39A0A0G2JS06 123 aa10.41□□□□□ -0.74
SNX20-202ENST00000330943 HERVK_113P63121 156 aa10.41□□□□□ -0.74
SNX20-202ENST00000330943 DEFB112Q30KQ8 113 aa10.41□□□□□ -0.74
SNX20-202ENST00000330943 IMUPQ9GZP8 106 aa10.41□□□□□ -0.74
SNX20-202ENST00000330943 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.74
SNX20-202ENST00000330943 BAALC-AS2P0C853 105 aa10.4□□□□□ -0.74
SNX20-202ENST00000330943 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
SNX20-202ENST00000330943 TRAV13-1A0A0B4J241 112 aa10.4□□□□□ -0.75
SNX20-202ENST00000330943 LINC00643Q86TS7 51 aa10.4□□□□□ -0.75
SNX20-202ENST00000330943 SMIM1B2RUZ4 78 aa10.39□□□□□ -0.75
SNX20-202ENST00000330943 TMEM126AQ9H061 195 aa10.39□□□□□ -0.75
SNX20-202ENST00000330943 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
SNX20-202ENST00000330943 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
SNX20-202ENST00000330943 TMEM89A2RUT3 159 aa10.38□□□□□ -0.75
SNX20-202ENST00000330943 DEFB136Q30KP8 78 aa10.38□□□□□ -0.75
SNX20-202ENST00000330943 HIST2H2BCQ6DN03 193 aa10.38□□□□□ -0.75
SNX20-202ENST00000330943 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
SNX20-202ENST00000330943 BEAN1Q3B7T3 259 aa10.38□□□□□ -0.75
SNX20-202ENST00000330943 C11orf72Q8NBR9 251 aa10.38□□□□□ -0.75
SNX20-202ENST00000330943 FAM218AQ96MZ4 157 aa10.38□□□□□ -0.75
SNX20-202ENST00000330943 TRACP01848 142 aa10.37□□□□□ -0.75
SNX20-202ENST00000330943 SLURP1P55000 103 aa10.37□□□□□ -0.75
SNX20-202ENST00000330943 C9orf153Q5TBE3 101 aa10.37□□□□□ -0.75
SNX20-202ENST00000330943 KRTAP10-9P60411 292 aa10.37□□□□□ -0.75
SNX20-202ENST00000330943 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
SNX20-202ENST00000330943 A8MTW9 85 aa10.36□□□□□ -0.75
SNX20-202ENST00000330943 B4DSR2 109 aa10.36□□□□□ -0.75
SNX20-202ENST00000330943 GAGE2AQ6NT46 116 aa10.36□□□□□ -0.75
SNX20-202ENST00000330943 Q9HAA7 133 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms