RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 KRTAP29-1A8MX34 341 aaPredicted RBP11.74□□□□□ -0.53
RAB28-202ENST00000330852 FABP4P15090 132 aa11.73□□□□□ -0.53
RAB28-202ENST00000330852 CLPSL2Q6UWE3 100 aa11.73□□□□□ -0.53
RAB28-202ENST00000330852 RPP21Q9H633 154 aaKnown RBP11.73□□□□□ -0.53
RAB28-202ENST00000330852 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
RAB28-202ENST00000330852 TWIST1Q15672 202 aa11.72□□□□□ -0.53
RAB28-202ENST00000330852 C20orf203Q8NBC4 194 aa11.72□□□□□ -0.53
RAB28-202ENST00000330852 PACRGQ96M98 296 aaPredicted RBP11.72□□□□□ -0.53
RAB28-202ENST00000330852 COTL1Q14019 142 aa11.72□□□□□ -0.53
RAB28-202ENST00000330852 UBE2L6O14933 153 aa11.71□□□□□ -0.54
RAB28-202ENST00000330852 SMIM15Q7Z3B0 74 aa11.7□□□□□ -0.54
RAB28-202ENST00000330852 V9GYV3 84 aa11.7□□□□□ -0.54
RAB28-202ENST00000330852 AMTP48728 403 aa11.69□□□□□ -0.54
RAB28-202ENST00000330852 KRTAP10-4P60372 401 aaPredicted RBP11.69□□□□□ -0.54
RAB28-202ENST00000330852 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
RAB28-202ENST00000330852 IGLV4-60A0A075B6I1 120 aa11.69□□□□□ -0.54
RAB28-202ENST00000330852 CNBPP62633 177 aaKnown RBP11.69□□□□□ -0.54
RAB28-202ENST00000330852 TRAPPC1Q9Y5R8 145 aa11.69□□□□□ -0.54
RAB28-202ENST00000330852 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
RAB28-202ENST00000330852 JOSD1Q15040 202 aaPredicted RBP11.68□□□□□ -0.54
RAB28-202ENST00000330852 GATD1Q8NB37 220 aa11.68□□□□□ -0.54
RAB28-202ENST00000330852 NCR2O95944 276 aa11.67□□□□□ -0.54
RAB28-202ENST00000330852 FAM231DQ6ZW35 169 aa11.67□□□□□ -0.54
RAB28-202ENST00000330852 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
RAB28-202ENST00000330852 A8MWL6 223 aa11.66□□□□□ -0.54
RAB28-202ENST00000330852 SDIM1Q6ZPB5 146 aa11.66□□□□□ -0.54
RAB28-202ENST00000330852 AP5S1Q9NUS5 200 aa11.66□□□□□ -0.54
RAB28-202ENST00000330852 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.66□□□□□ -0.54
RAB28-202ENST00000330852 H7C423 109 aa11.66□□□□□ -0.54
RAB28-202ENST00000330852 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
RAB28-202ENST00000330852 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
RAB28-202ENST00000330852 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
RAB28-202ENST00000330852 OXTP01178 125 aa11.65□□□□□ -0.54
RAB28-202ENST00000330852 CT83Q5H943 113 aa11.65□□□□□ -0.54
RAB28-202ENST00000330852 GFRA4Q9GZZ7 299 aa11.65□□□□□ -0.54
RAB28-202ENST00000330852 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
RAB28-202ENST00000330852 RPL37AP61513 92 aaKnown RBP11.63□□□□□ -0.55
RAB28-202ENST00000330852 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
RAB28-202ENST00000330852 TMEM18Q96B42 140 aa11.63□□□□□ -0.55
RAB28-202ENST00000330852 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
RAB28-202ENST00000330852 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
RAB28-202ENST00000330852 CIRBPQ14011 172 aaKnown RBP11.62□□□□□ -0.55
RAB28-202ENST00000330852 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
RAB28-202ENST00000330852 BORCS7Q96B45 105 aa11.62□□□□□ -0.55
RAB28-202ENST00000330852 RNF185Q96GF1 192 aa11.62□□□□□ -0.55
RAB28-202ENST00000330852 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.62□□□□□ -0.55
RAB28-202ENST00000330852 SMIM27A0A1W2PRY6 76 aa11.61□□□□□ -0.55
RAB28-202ENST00000330852 ESDP10768 282 aa11.61□□□□□ -0.55
RAB28-202ENST00000330852 LINC00310P59036 64 aa11.61□□□□□ -0.55
RAB28-202ENST00000330852 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
RAB28-202ENST00000330852 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
RAB28-202ENST00000330852 SDHAF1A6NFY7 115 aa11.6□□□□□ -0.55
RAB28-202ENST00000330852 NUPR1O60356 82 aa11.6□□□□□ -0.55
RAB28-202ENST00000330852 APCSP02743 223 aa11.6□□□□□ -0.55
RAB28-202ENST00000330852 RPL39LQ96EH5 51 aaKnown RBP11.6□□□□□ -0.55
RAB28-202ENST00000330852 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
RAB28-202ENST00000330852 ZNF25P17030 456 aaPredicted RBP11.6□□□□□ -0.55
RAB28-202ENST00000330852 FAM231BA6NCW3 169 aa11.59□□□□□ -0.55
RAB28-202ENST00000330852 I3L3M4 83 aa11.59□□□□□ -0.55
RAB28-202ENST00000330852 GAGE12HA6NDE8 117 aa11.58□□□□□ -0.56
RAB28-202ENST00000330852 COX19Q49B96 90 aa11.58□□□□□ -0.56
RAB28-202ENST00000330852 TMEM136Q6ZRR5 245 aa11.58□□□□□ -0.56
RAB28-202ENST00000330852 MT-ND6P03923 174 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 SLPIP03973 132 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 FGF6P10767 208 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 PMCHP20382 165 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 RNASEKQ6P5S7 137 aaKnown RBP11.57□□□□□ -0.56
RAB28-202ENST00000330852 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 A0A1B0GUT8 65 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 PANO1I0J062 215 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 C15orf56Q8N910 161 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 TMEM191AQ9H0A3 160 aa11.57□□□□□ -0.56
RAB28-202ENST00000330852 CHCHD10Q8WYQ3 142 aaPredicted RBP11.56□□□□□ -0.56
RAB28-202ENST00000330852 ST20Q9HBF5 79 aa11.56□□□□□ -0.56
RAB28-202ENST00000330852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
RAB28-202ENST00000330852 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
RAB28-202ENST00000330852 TSTD3H0UI37 97 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 DDTP30046 118 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 ZNF664Q8N3J9 261 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 OR5A1Q8NGJ0 315 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 DPH3Q96FX2 82 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 HIGD1CA8MV81 97 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 PRO1933Q9H354 126 aa11.55□□□□□ -0.56
RAB28-202ENST00000330852 SERF1AO75920 110 aa11.54□□□□□ -0.56
RAB28-202ENST00000330852 SPACA4Q8TDM5 124 aa11.54□□□□□ -0.56
RAB28-202ENST00000330852 MRAP2Q96G30 205 aa11.54□□□□□ -0.56
RAB28-202ENST00000330852 C14orf144Q96I85 54 aa11.54□□□□□ -0.56
RAB28-202ENST00000330852 NAT8BQ9UHF3 227 aa11.53□□□□□ -0.56
RAB28-202ENST00000330852 A0A087WYN8 130 aa11.52□□□□□ -0.56
RAB28-202ENST00000330852 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.56
RAB28-202ENST00000330852 POLR2KP53803 58 aaKnown RBP11.52□□□□□ -0.56
RAB28-202ENST00000330852 LRP1Q07954 4544 aaKnown RBP11.52□□□□□ -0.57
RAB28-202ENST00000330852 TRBV27A0A0K0K1C4 114 aa11.52□□□□□ -0.57
RAB28-202ENST00000330852 PPP1R17O96001 155 aa11.52□□□□□ -0.57
RAB28-202ENST00000330852 TSHBP01222 138 aa11.52□□□□□ -0.57
RAB28-202ENST00000330852 RAB4AP20338 218 aa11.52□□□□□ -0.57
RAB28-202ENST00000330852 PLAC8Q9NZF1 115 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms