RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 F5H768 121 aa10.46□□□□□ -0.73
EPHB3-201ENST00000330394 MRAPQ8TCY5 172 aa10.46□□□□□ -0.73
EPHB3-201ENST00000330394 LINC00308Q8TCZ7 52 aa10.46□□□□□ -0.73
EPHB3-201ENST00000330394 C1orf43Q9BWL3 253 aa10.46□□□□□ -0.74
EPHB3-201ENST00000330394 IGIPA6NJ69 53 aa10.46□□□□□ -0.74
EPHB3-201ENST00000330394 EBI3Q14213 229 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 MAP1AP78559 2803 aaPredicted RBP10.45□□□□□ -0.74
EPHB3-201ENST00000330394 MRGPRG-AS1Q2M3A8 158 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 TMEM263Q8WUH6 116 aaKnown RBP10.45□□□□□ -0.74
EPHB3-201ENST00000330394 IGLV2-18A0A075B6J9 118 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 H7C423 109 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 K7EQD1 137 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 UBE2D3P61077 147 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 UBE2D2P62837 147 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 CDIP1Q9H305 208 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 VPREB3Q9UKI3 123 aa10.45□□□□□ -0.74
EPHB3-201ENST00000330394 UQCRQO14949 82 aa10.44□□□□□ -0.74
EPHB3-201ENST00000330394 HIST2H2BDQ6DRA6 164 aa10.44□□□□□ -0.74
EPHB3-201ENST00000330394 MYO15AQ9UKN7 3530 aa10.44□□□□□ -0.74
EPHB3-201ENST00000330394 TSHBP01222 138 aa10.44□□□□□ -0.74
EPHB3-201ENST00000330394 POM121L12Q8N7R1 296 aa10.44□□□□□ -0.74
EPHB3-201ENST00000330394 CMC4P56277 68 aaPredicted RBP10.43□□□□□ -0.74
EPHB3-201ENST00000330394 C20orf197Q8N268 126 aa10.43□□□□□ -0.74
EPHB3-201ENST00000330394 FRYQ5TBA9 3013 aa10.43□□□□□ -0.74
EPHB3-201ENST00000330394 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
EPHB3-201ENST00000330394 ACANP16112 2415 aa10.42□□□□□ -0.74
EPHB3-201ENST00000330394 TNFRSF13BO14836 293 aaPredicted RBP10.42□□□□□ -0.74
EPHB3-201ENST00000330394 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
EPHB3-201ENST00000330394 CRYGDP07320 174 aa10.42□□□□□ -0.74
EPHB3-201ENST00000330394 EDN2P20800 178 aa10.42□□□□□ -0.74
EPHB3-201ENST00000330394 DAD1P61803 113 aa10.42□□□□□ -0.74
EPHB3-201ENST00000330394 K7EQG2 157 aa10.42□□□□□ -0.74
EPHB3-201ENST00000330394 LST1O00453 97 aa10.42□□□□□ -0.74
EPHB3-201ENST00000330394 Q8N6K4 173 aa10.42□□□□□ -0.74
EPHB3-201ENST00000330394 PSMB8P28062 276 aa10.41□□□□□ -0.74
EPHB3-201ENST00000330394 Q6ZTI0 123 aa10.41□□□□□ -0.74
EPHB3-201ENST00000330394 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
EPHB3-201ENST00000330394 NCR3O14931 201 aa10.41□□□□□ -0.74
EPHB3-201ENST00000330394 SMCPP49901 116 aaPredicted RBP10.41□□□□□ -0.74
EPHB3-201ENST00000330394 C3orf22Q8N5N4 141 aa10.41□□□□□ -0.74
EPHB3-201ENST00000330394 GYPEP15421 78 aa10.4□□□□□ -0.74
EPHB3-201ENST00000330394 CENPEQ02224 2701 aa10.4□□□□□ -0.74
EPHB3-201ENST00000330394 A6NDX4 124 aa10.4□□□□□ -0.75
EPHB3-201ENST00000330394 C10orf105Q8TEF2 133 aa10.4□□□□□ -0.75
EPHB3-201ENST00000330394 TRBV6-5A0A0K0K1A5 114 aa10.39□□□□□ -0.75
EPHB3-201ENST00000330394 IGF2-ASQ6U949 168 aa10.39□□□□□ -0.75
EPHB3-201ENST00000330394 DEFB105AQ8NG35 78 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 CCL24O00175 119 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 CDSNQ15517 529 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 FBXL19-AS1Q494R0 122 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 Q96MF0 132 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 SPANXCQ9NY87 97 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 KLLNB2CW77 178 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 PSMG3-AS1Q96PY0 264 aa10.38□□□□□ -0.75
EPHB3-201ENST00000330394 NDUFA7O95182 113 aa10.37□□□□□ -0.75
EPHB3-201ENST00000330394 ADAMTSL4-AS1Q5T5F5 129 aa10.37□□□□□ -0.75
EPHB3-201ENST00000330394 IGHV4-28A0A0C4DH34 117 aa10.37□□□□□ -0.75
EPHB3-201ENST00000330394 TIRAPP58753 221 aa10.37□□□□□ -0.75
EPHB3-201ENST00000330394 COL6A3P12111 3177 aa10.36□□□□□ -0.75
EPHB3-201ENST00000330394 COX8CQ7Z4L0 72 aa10.36□□□□□ -0.75
EPHB3-201ENST00000330394 WFDC11Q8NEX6 87 aa10.36□□□□□ -0.75
EPHB3-201ENST00000330394 NDUFA1O15239 70 aa10.35□□□□□ -0.75
EPHB3-201ENST00000330394 DEFB4AO15263 64 aa10.35□□□□□ -0.75
EPHB3-201ENST00000330394 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
EPHB3-201ENST00000330394 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
EPHB3-201ENST00000330394 NBL1P41271 181 aa10.35□□□□□ -0.75
EPHB3-201ENST00000330394 MUC4Q99102 2169 aa10.35□□□□□ -0.75
EPHB3-201ENST00000330394 MAP6D1Q9H9H5 199 aa10.35□□□□□ -0.75
EPHB3-201ENST00000330394 RAI1Q7Z5J4 1906 aaPredicted RBP10.35□□□□□ -0.75
EPHB3-201ENST00000330394 JMJD7-PLA2G4BH0Y9G9 81 aa10.34□□□□□ -0.75
EPHB3-201ENST00000330394 KLK5Q9Y337 293 aaPredicted RBP10.34□□□□□ -0.75
EPHB3-201ENST00000330394 ENHOQ6UWT2 76 aa10.34□□□□□ -0.75
EPHB3-201ENST00000330394 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
EPHB3-201ENST00000330394 RNF152Q8N8N0 203 aa10.33□□□□□ -0.76
EPHB3-201ENST00000330394 PYGO1Q9Y3Y4 419 aa10.33□□□□□ -0.76
EPHB3-201ENST00000330394 M0QXV9 152 aa10.33□□□□□ -0.76
EPHB3-201ENST00000330394 SCXQ7RTU7 201 aa10.33□□□□□ -0.76
EPHB3-201ENST00000330394 C19orf84I3L1E1 186 aa10.32□□□□□ -0.76
EPHB3-201ENST00000330394 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
EPHB3-201ENST00000330394 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
EPHB3-201ENST00000330394 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
EPHB3-201ENST00000330394 A0A087WVE0 104 aa10.31□□□□□ -0.76
EPHB3-201ENST00000330394 USP17L23D6RBM5 183 aa10.31□□□□□ -0.76
EPHB3-201ENST00000330394 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
EPHB3-201ENST00000330394 WFDC9Q8NEX5 89 aa10.31□□□□□ -0.76
EPHB3-201ENST00000330394 J3QLI3 93 aa10.31□□□□□ -0.76
EPHB3-201ENST00000330394 NKAPP1Q8N9T2 125 aa10.31□□□□□ -0.76
EPHB3-201ENST00000330394 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
EPHB3-201ENST00000330394 UPK3BQ9BT76 320 aa10.31□□□□□ -0.76
EPHB3-201ENST00000330394 RPL18AQ02543 176 aaKnown RBP10.3□□□□□ -0.76
EPHB3-201ENST00000330394 ODF3Q96PU9 254 aa10.3□□□□□ -0.76
EPHB3-201ENST00000330394 TMEM256-PLSCR3K7ERE1 68 aa10.3□□□□□ -0.76
EPHB3-201ENST00000330394 C11orf71Q6IPW1 123 aa10.3□□□□□ -0.76
EPHB3-201ENST00000330394 COX7CP15954 63 aa10.29□□□□□ -0.76
EPHB3-201ENST00000330394 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
EPHB3-201ENST00000330394 FASNP49327 2511 aaKnown RBP10.29□□□□□ -0.76
EPHB3-201ENST00000330394 Q6Q795 121 aa10.29□□□□□ -0.76
EPHB3-201ENST00000330394 SHISA2Q6UWI4 295 aa10.29□□□□□ -0.76
EPHB3-201ENST00000330394 BOD1L1Q8NFC6 3051 aa10.29□□□□□ -0.76
EPHB3-201ENST00000330394 IMUPQ9GZP8 106 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms