RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 FAM208BQ5VWN6 2430 aa5.76□□□□□ -1.49
VMA21-201ENST00000330374 VSIG2Q96IQ7 327 aa5.76□□□□□ -1.49
VMA21-201ENST00000330374 TMEM61Q8N0U2 210 aa5.76□□□□□ -1.49
VMA21-201ENST00000330374 SONP18583 2426 aaKnown RBP5.76□□□□□ -1.49
VMA21-201ENST00000330374 LINC00467Q9BRT7 94 aa5.76□□□□□ -1.49
VMA21-201ENST00000330374 RBMY1A1P0DJD3 496 aaKnown RBP5.76□□□□□ -1.49
VMA21-201ENST00000330374 RBMY1FQ15415 496 aaKnown RBP5.76□□□□□ -1.49
VMA21-201ENST00000330374 LST1O00453 97 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 NDUFA7O95182 113 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 FAM104AQ969W3 186 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 CACNA1AO00555 2505 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 ACACBO00763 2458 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 IGHV3OR16-12A0A075B7B8 117 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 TRAV25A0A0B4J276 109 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 MRPS36P82909 103 aaKnown RBP5.75□□□□□ -1.49
VMA21-201ENST00000330374 Q9H8V8 135 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 LY6DQ14210 128 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 LRRC75A-AS1Q8N1F1 130 aa5.75□□□□□ -1.49
VMA21-201ENST00000330374 TRAV13-1A0A0B4J241 112 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 H3BT86 120 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 C19orf84I3L1E1 186 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 HOXD3P31249 432 aaPredicted RBP5.74□□□□□ -1.49
VMA21-201ENST00000330374 C6orf226Q5I0X4 101 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 FLNCQ14315 2725 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 MYO18BQ8IUG5 2567 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 M0QXV9 152 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 PLA2G1BP04054 148 aaKnown RBP5.74□□□□□ -1.49
VMA21-201ENST00000330374 DEFB131AP59861 70 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 DEFB136Q30KP8 78 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
VMA21-201ENST00000330374 KLRB1Q12918 225 aa5.74□□□□□ -1.49
VMA21-201ENST00000330374 A6NDX4 124 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 COX6A2Q02221 97 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 Q8N2B8 174 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.73□□□□□ -1.49
VMA21-201ENST00000330374 IGHV4-59P01825 116 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 Q6Q795 121 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 TMEM101Q96IK0 257 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 SPANXDQ9BXN6 97 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 SPANXCQ9NY87 97 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 K7EQG2 157 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 MAPK1IP1LQ8NDC0 245 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 UBE2D4Q9Y2X8 147 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 IGHV3-53P01767 116 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 CIRBPQ14011 172 aaKnown RBP5.73□□□□□ -1.49
VMA21-201ENST00000330374 Q9HAA7 133 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 CHD6Q8TD26 2715 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 EPG5Q9HCE0 2579 aa5.73□□□□□ -1.49
VMA21-201ENST00000330374 CHCHD7Q9BUK0 85 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 FBN2P35556 2912 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 TINCRA0A1B0GVN0 87 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 LINC01587Q99440 93 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 GAGE2AQ6NT46 116 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 MXRA5Q9NR99 2828 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 LYRM9A8MSI8 78 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 DAZ2Q13117 558 aaKnown RBP5.72□□□□□ -1.49
VMA21-201ENST00000330374 PIK3CD-AS1Q5SR53 167 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 DAZ4Q86SG3 579 aaKnown RBP5.72□□□□□ -1.49
VMA21-201ENST00000330374 PRIMA1Q86XR5 153 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 SMCR5Q8TEV8 140 aa5.72□□□□□ -1.49
VMA21-201ENST00000330374 DAZ3Q9NR90 486 aaKnown RBP5.72□□□□□ -1.49
VMA21-201ENST00000330374 KLK5Q9Y337 293 aaPredicted RBP5.72□□□□□ -1.49
VMA21-201ENST00000330374 FN1P02751 2386 aaKnown RBP5.71□□□□□ -1.49
VMA21-201ENST00000330374 NAV2Q8IVL1 2488 aa5.71□□□□□ -1.49
VMA21-201ENST00000330374 IGHV4-30-2A0A087WSY4 118 aa5.71□□□□□ -1.49
VMA21-201ENST00000330374 H3BUA1 57 aa5.71□□□□□ -1.49
VMA21-201ENST00000330374 C5orf47Q569G3 176 aa5.71□□□□□ -1.49
VMA21-201ENST00000330374 PYGO1Q9Y3Y4 419 aa5.71□□□□□ -1.49
VMA21-201ENST00000330374 K7EMT4 169 aa5.71□□□□□ -1.5
VMA21-201ENST00000330374 WIPF1O43516 503 aa5.71□□□□□ -1.5
VMA21-201ENST00000330374 BAALC-AS2P0C853 105 aa5.71□□□□□ -1.5
VMA21-201ENST00000330374 ATP5J2P56134 94 aa5.71□□□□□ -1.5
VMA21-201ENST00000330374 LINC01356Q8N9X3 169 aa5.71□□□□□ -1.5
VMA21-201ENST00000330374 ABCA12Q86UK0 2595 aa5.71□□□□□ -1.5
VMA21-201ENST00000330374 PPDPFQ9H3Y8 114 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 LRRK2Q5S007 2527 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 SOSTDC1Q6X4U4 206 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 C18orf65Q6ZTR6 163 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 TOMM7Q9P0U1 55 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 SLURP1P55000 103 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 NRGNQ92686 78 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 CCDC168Q8NDH2 2452 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 UBE2E2Q96LR5 201 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 SPANXA1Q9NS26 97 aa5.7□□□□□ -1.5
VMA21-201ENST00000330374 ANKRD17O75179 2603 aaKnown RBP5.7□□□□□ -1.5
VMA21-201ENST00000330374 LINC00694P0DN24 101 aa5.69□□□□□ -1.5
VMA21-201ENST00000330374 PSMB8P28062 276 aa5.69□□□□□ -1.5
VMA21-201ENST00000330374 DEFB112Q30KQ8 113 aa5.69□□□□□ -1.5
VMA21-201ENST00000330374 XCL2Q9UBD3 114 aa5.69□□□□□ -1.5
VMA21-201ENST00000330374 CSDC2Q9Y534 153 aaKnown RBP5.69□□□□□ -1.5
VMA21-201ENST00000330374 NIPBLQ6KC79 2804 aaeCLIP5.69□□□□□ -1.5
VMA21-201ENST00000330374 CCL19Q99731 98 aa5.69□□□□□ -1.5
VMA21-201ENST00000330374 COX7A2LO14548 114 aa5.69□□□□□ -1.5
VMA21-201ENST00000330374 FAM218AQ96MZ4 157 aa5.69□□□□□ -1.5
VMA21-201ENST00000330374 RBMY1BA6NDE4 496 aaKnown RBP5.69□□□□□ -1.5
VMA21-201ENST00000330374 RBMY1EA6NEQ0 496 aaKnown RBP5.69□□□□□ -1.5
VMA21-201ENST00000330374 RBMY1DP0C7P1 496 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms