RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 LINC00526Q96FQ7 95 aa8.19□□□□□ -1.1
GINS3-202ENST00000328514 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
GINS3-202ENST00000328514 A8MTW9 85 aa8.18□□□□□ -1.1
GINS3-202ENST00000328514 NPC2P61916 151 aa8.18□□□□□ -1.1
GINS3-202ENST00000328514 BRD3OSQ6XYD6 125 aa8.18□□□□□ -1.1
GINS3-202ENST00000328514 CDKN2A-AS1Q9UH64 79 aa8.18□□□□□ -1.1
GINS3-202ENST00000328514 VPREB3Q9UKI3 123 aa8.18□□□□□ -1.1
GINS3-202ENST00000328514 IGHV3OR16-10A0A075B7F0 116 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 TMEM89A2RUT3 159 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 H3BUX3 64 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 NDUFA7O95182 113 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 PSMB8P28062 276 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 IGKV3-20P01619 116 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 LY6EQ16553 131 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 RNASE13Q5GAN3 156 aaKnown RBP8.17□□□□□ -1.1
GINS3-202ENST00000328514 UBTD1Q9HAC8 227 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 C22orf24Q9Y442 160 aa8.17□□□□□ -1.1
GINS3-202ENST00000328514 RBMY1A1P0DJD3 496 aaKnown RBP8.16□□□□□ -1.1
GINS3-202ENST00000328514 RBMY1CP0DJD4 496 aa8.16□□□□□ -1.1
GINS3-202ENST00000328514 PROK1P58294 105 aa8.16□□□□□ -1.1
GINS3-202ENST00000328514 DAZ2Q13117 558 aaKnown RBP8.16□□□□□ -1.1
GINS3-202ENST00000328514 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
GINS3-202ENST00000328514 DAZ4Q86SG3 579 aaKnown RBP8.16□□□□□ -1.1
GINS3-202ENST00000328514 LINC00467Q9BRT7 94 aa8.16□□□□□ -1.1
GINS3-202ENST00000328514 DAZ3Q9NR90 486 aaKnown RBP8.16□□□□□ -1.1
GINS3-202ENST00000328514 IGHV3-53P01767 116 aa8.15□□□□□ -1.1
GINS3-202ENST00000328514 INAFM2P0DMQ5 153 aa8.15□□□□□ -1.1
GINS3-202ENST00000328514 HIST1H4AP62805 103 aaKnown RBP8.15□□□□□ -1.1
GINS3-202ENST00000328514 HERVK_113P63121 156 aa8.15□□□□□ -1.1
GINS3-202ENST00000328514 KRTAP21-3Q3LHN1 58 aa8.15□□□□□ -1.1
GINS3-202ENST00000328514 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.15□□□□□ -1.1
GINS3-202ENST00000328514 DUX5Q96PT3 197 aa8.15□□□□□ -1.1
GINS3-202ENST00000328514 POLQO75417 2590 aa8.15□□□□□ -1.1
GINS3-202ENST00000328514 ITPR2Q14571 2701 aa8.15□□□□□ -1.11
GINS3-202ENST00000328514 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.11
GINS3-202ENST00000328514 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.11
GINS3-202ENST00000328514 IGHV4-38-2P0DP08 117 aa8.15□□□□□ -1.11
GINS3-202ENST00000328514 UCNP55089 124 aa8.15□□□□□ -1.11
GINS3-202ENST00000328514 C9orf153Q5TBE3 101 aa8.15□□□□□ -1.11
GINS3-202ENST00000328514 NRGNQ92686 78 aa8.15□□□□□ -1.11
GINS3-202ENST00000328514 A0A1B0GX51 115 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 PF4P02776 101 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 BAALC-AS2P0C853 105 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 ZNF415Q09FC8 603 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 KLRB1Q12918 225 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 Q6ZSN1 163 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 Q9H8V8 135 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 NACAE9PAV3 2078 aa8.14□□□□□ -1.11
GINS3-202ENST00000328514 IGHV3-73A0A0B4J1V6 119 aa8.13□□□□□ -1.11
GINS3-202ENST00000328514 Q8N2B8 174 aa8.13□□□□□ -1.11
GINS3-202ENST00000328514 ZNF625Q96I27 306 aaPredicted RBP8.13□□□□□ -1.11
GINS3-202ENST00000328514 Q9UF83 564 aa8.13□□□□□ -1.11
GINS3-202ENST00000328514 SETD2Q9BYW2 2564 aaPredicted RBP8.13□□□□□ -1.11
GINS3-202ENST00000328514 IGHV3OR16-12A0A075B7B8 117 aa8.13□□□□□ -1.11
GINS3-202ENST00000328514 COX7CP15954 63 aa8.13□□□□□ -1.11
GINS3-202ENST00000328514 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
GINS3-202ENST00000328514 LRRC75A-AS1Q8N1F1 130 aa8.13□□□□□ -1.11
GINS3-202ENST00000328514 CSDC2Q9Y534 153 aaKnown RBP8.13□□□□□ -1.11
GINS3-202ENST00000328514 NBASA2RRP1 2371 aa8.12□□□□□ -1.11
GINS3-202ENST00000328514 DNHD1Q96M86 4753 aa8.12□□□□□ -1.11
GINS3-202ENST00000328514 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
GINS3-202ENST00000328514 CRYGAP11844 174 aa8.12□□□□□ -1.11
GINS3-202ENST00000328514 COX6A2Q02221 97 aa8.12□□□□□ -1.11
GINS3-202ENST00000328514 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
GINS3-202ENST00000328514 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
GINS3-202ENST00000328514 LINC00694P0DN24 101 aa8.11□□□□□ -1.11
GINS3-202ENST00000328514 RPL28P46779 137 aaKnown RBP8.11□□□□□ -1.11
GINS3-202ENST00000328514 NF1P21359 2839 aa8.11□□□□□ -1.11
GINS3-202ENST00000328514 RPS28P62857 69 aaKnown RBP8.11□□□□□ -1.11
GINS3-202ENST00000328514 HIST2H2BDQ6DRA6 164 aa8.11□□□□□ -1.11
GINS3-202ENST00000328514 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
GINS3-202ENST00000328514 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
GINS3-202ENST00000328514 ATOX1O00244 68 aa8.1□□□□□ -1.11
GINS3-202ENST00000328514 RS1O15537 224 aa8.1□□□□□ -1.11
GINS3-202ENST00000328514 C3orf56Q8N813 242 aa8.1□□□□□ -1.11
GINS3-202ENST00000328514 C11orf72Q8NBR9 251 aa8.1□□□□□ -1.11
GINS3-202ENST00000328514 FAM218AQ96MZ4 157 aa8.1□□□□□ -1.11
GINS3-202ENST00000328514 KNCNA6PVL3 124 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 F5H768 121 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 J3KT08 172 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 MALP21145 153 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 OBSCN-AS1Q96MR7 158 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 PIMREGQ9BSJ6 248 aa8.09□□□□□ -1.11
GINS3-202ENST00000328514 SYNJ2BPP57105 145 aa8.08□□□□□ -1.12
GINS3-202ENST00000328514 PRIMA1Q86XR5 153 aa8.08□□□□□ -1.12
GINS3-202ENST00000328514 RBMY1BA6NDE4 496 aaKnown RBP8.07□□□□□ -1.12
GINS3-202ENST00000328514 RBMY1EA6NEQ0 496 aaKnown RBP8.07□□□□□ -1.12
GINS3-202ENST00000328514 RBMY1DP0C7P1 496 aaKnown RBP8.07□□□□□ -1.12
GINS3-202ENST00000328514 C10orf105Q8TEF2 133 aa8.07□□□□□ -1.12
GINS3-202ENST00000328514 IGHV3-38A0A0C4DH36 116 aa8.07□□□□□ -1.12
GINS3-202ENST00000328514 OTOGQ6ZRI0 2925 aa8.06□□□□□ -1.12
GINS3-202ENST00000328514 SORL1Q92673 2214 aa8.06□□□□□ -1.12
GINS3-202ENST00000328514 HTN1P15515 57 aa8.06□□□□□ -1.12
GINS3-202ENST00000328514 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
GINS3-202ENST00000328514 AKAP6Q13023 2319 aa8.06□□□□□ -1.12
GINS3-202ENST00000328514 HIVEP3Q5T1R4 2406 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms