RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TSHBP01222 138 aa12.23□□□□□ -0.45
SMAD3-201ENST00000327367 WISP2O76076 250 aa12.23□□□□□ -0.45
SMAD3-201ENST00000327367 FAM222AQ5U5X8 452 aa12.22□□□□□ -0.45
SMAD3-201ENST00000327367 IGLV2-11P01706 119 aa12.22□□□□□ -0.45
SMAD3-201ENST00000327367 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
SMAD3-201ENST00000327367 CRYGDP07320 174 aa12.21□□□□□ -0.45
SMAD3-201ENST00000327367 LINC00310P59036 64 aa12.2□□□□□ -0.46
SMAD3-201ENST00000327367 PCDH15Q96QU1 1955 aa12.2□□□□□ -0.46
SMAD3-201ENST00000327367 TRAV7A0A075B6U4 112 aa12.19□□□□□ -0.46
SMAD3-201ENST00000327367 TNCP24821 2201 aa12.19□□□□□ -0.46
SMAD3-201ENST00000327367 TRBV6-8A0A0A6YYG3 113 aa12.19□□□□□ -0.46
SMAD3-201ENST00000327367 DEFB113Q30KQ7 82 aa12.19□□□□□ -0.46
SMAD3-201ENST00000327367 PRR9Q5T870 116 aa12.18□□□□□ -0.46
SMAD3-201ENST00000327367 LTBP1Q14766 1721 aa12.18□□□□□ -0.46
SMAD3-201ENST00000327367 IGLV9-49A0A0B4J1Y8 123 aa12.18□□□□□ -0.46
SMAD3-201ENST00000327367 LYRM9A8MSI8 78 aa12.18□□□□□ -0.46
SMAD3-201ENST00000327367 LINC00208Q96KT6 92 aa12.18□□□□□ -0.46
SMAD3-201ENST00000327367 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
SMAD3-201ENST00000327367 RETNLBQ9BQ08 111 aa12.17□□□□□ -0.46
SMAD3-201ENST00000327367 PLXNB3Q9ULL4 1909 aa12.17□□□□□ -0.46
SMAD3-201ENST00000327367 A0A087WYN8 130 aa12.17□□□□□ -0.46
SMAD3-201ENST00000327367 PRYO14603 147 aa12.17□□□□□ -0.46
SMAD3-201ENST00000327367 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
SMAD3-201ENST00000327367 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
SMAD3-201ENST00000327367 SHISA2Q6UWI4 295 aa12.17□□□□□ -0.46
SMAD3-201ENST00000327367 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
SMAD3-201ENST00000327367 A6NDX4 124 aa12.16□□□□□ -0.46
SMAD3-201ENST00000327367 EIF4EBP1Q13541 118 aaPredicted RBP12.15□□□□□ -0.47
SMAD3-201ENST00000327367 PCOTHQ58A44 107 aa12.15□□□□□ -0.47
SMAD3-201ENST00000327367 ZNF843Q8N446 348 aa12.15□□□□□ -0.47
SMAD3-201ENST00000327367 CNOT1A5YKK6 2376 aaKnown RBP12.14□□□□□ -0.47
SMAD3-201ENST00000327367 LY6LH3BQJ8 138 aa12.14□□□□□ -0.47
SMAD3-201ENST00000327367 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
SMAD3-201ENST00000327367 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
SMAD3-201ENST00000327367 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
SMAD3-201ENST00000327367 MYCNOSP40205 109 aa12.14□□□□□ -0.47
SMAD3-201ENST00000327367 ANAPC1Q9H1A4 1944 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 UBE2D1P51668 147 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
SMAD3-201ENST00000327367 C10orf99Q6UWK7 81 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 BBC3Q96PG8 261 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-201ENST00000327367 COL4A3Q01955 1670 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 ADORA2A-AS1P86434 159 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 NCOA6Q14686 2063 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-201ENST00000327367 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 ZNF106Q9H2Y7 1883 aaKnown RBP12.13□□□□□ -0.47
SMAD3-201ENST00000327367 K7EQG2 157 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 HILS1P60008 231 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 LINC00482Q8N8I6 264 aa12.13□□□□□ -0.47
SMAD3-201ENST00000327367 NTM-AS1Q6ZSK4 140 aa12.11□□□□□ -0.47
SMAD3-201ENST00000327367 ODF3Q96PU9 254 aa12.11□□□□□ -0.47
SMAD3-201ENST00000327367 TRBV7-6A0A0J9YX20 115 aa12.11□□□□□ -0.47
SMAD3-201ENST00000327367 TSPEAR-AS2P59090 65 aa12.11□□□□□ -0.47
SMAD3-201ENST00000327367 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
SMAD3-201ENST00000327367 PCNX1Q96RV3 2341 aa12.11□□□□□ -0.47
SMAD3-201ENST00000327367 C4orf26Q17RF5 130 aa12.1□□□□□ -0.47
SMAD3-201ENST00000327367 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
SMAD3-201ENST00000327367 MED13LQ71F56 2210 aa12.1□□□□□ -0.47
SMAD3-201ENST00000327367 ESRGQ1W209 222 aa12.1□□□□□ -0.47
SMAD3-201ENST00000327367 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-201ENST00000327367 CRYGAP11844 174 aa12.1□□□□□ -0.47
SMAD3-201ENST00000327367 M0R378 163 aa12.09□□□□□ -0.47
SMAD3-201ENST00000327367 LINC00959A0A1B0GUT2 108 aa12.09□□□□□ -0.47
SMAD3-201ENST00000327367 Q9UF83 564 aa12.09□□□□□ -0.47
SMAD3-201ENST00000327367 TRBV7-7A0A0K0K1E9 115 aa12.09□□□□□ -0.47
SMAD3-201ENST00000327367 C9orf116Q5BN46 136 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-201ENST00000327367 PLA2G2CQ5R387 149 aa12.08□□□□□ -0.47
SMAD3-201ENST00000327367 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.08□□□□□ -0.47
SMAD3-201ENST00000327367 ZNF580Q9UK33 172 aa12.08□□□□□ -0.47
SMAD3-201ENST00000327367 DEFB116Q30KQ4 102 aa12.08□□□□□ -0.48
SMAD3-201ENST00000327367 Q8N3U1 123 aa12.08□□□□□ -0.48
SMAD3-201ENST00000327367 ODF3BA8MYP8 253 aa12.08□□□□□ -0.48
SMAD3-201ENST00000327367 DEFB114Q30KQ6 69 aa12.08□□□□□ -0.48
SMAD3-201ENST00000327367 DHRS4-AS1Q9P1J3 65 aa12.07□□□□□ -0.48
SMAD3-201ENST00000327367 COX6A2Q02221 97 aa12.07□□□□□ -0.48
SMAD3-201ENST00000327367 DEFB131BA0A096LNP1 70 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 SPINK1P00995 79 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 Q8N814 137 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 MED12LQ86YW9 2145 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 CACNA1HO95180 2353 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 Q6ZVQ6 151 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 TMEM89A2RUT3 159 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 J3QKU1 62 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 ADAMTSL4-AS1Q5T5F5 129 aa12.06□□□□□ -0.48
SMAD3-201ENST00000327367 LINC01547P58512 204 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-201ENST00000327367 ACACAQ13085 2346 aa12.05□□□□□ -0.48
SMAD3-201ENST00000327367 IGLV4-69A0A075B6H9 119 aa12.05□□□□□ -0.48
SMAD3-201ENST00000327367 FREM1Q5H8C1 2179 aa12.05□□□□□ -0.48
SMAD3-201ENST00000327367 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
SMAD3-201ENST00000327367 CD164L2Q6UWJ8 174 aa12.05□□□□□ -0.48
SMAD3-201ENST00000327367 X6R8D5 127 aa12.05□□□□□ -0.48
SMAD3-201ENST00000327367 IGFL2Q6UWQ7 119 aa12.04□□□□□ -0.48
SMAD3-201ENST00000327367 POLR2KP53803 58 aaKnown RBP12.04□□□□□ -0.48
SMAD3-201ENST00000327367 KIR2DL5BQ8NHK3 375 aa12.04□□□□□ -0.48
SMAD3-201ENST00000327367 NUP210Q8TEM1 1887 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-201ENST00000327367 C2orf16Q68DN1 1984 aa12.03□□□□□ -0.48
SMAD3-201ENST00000327367 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
SMAD3-201ENST00000327367 TRBV6-4A0A1B0GX49 114 aa12.03□□□□□ -0.48
SMAD3-201ENST00000327367 PLXNB1O43157 2135 aa12.03□□□□□ -0.48
SMAD3-201ENST00000327367 IGLV2-18A0A075B6J9 118 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms