RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 C1orf158Q8N1D5 194 aa6□□□□□ -1.45
CIITA-201ENST00000324288 ZFAND3Q9H8U3 227 aa6□□□□□ -1.45
CIITA-201ENST00000324288 TP53TG3Q9ULZ0 132 aa6□□□□□ -1.45
CIITA-201ENST00000324288 IGKV1D-37A0A075B6S9 117 aa6□□□□□ -1.45
CIITA-201ENST00000324288 IGLV3-1P01715 115 aa6□□□□□ -1.45
CIITA-201ENST00000324288 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.99□□□□□ -1.45
CIITA-201ENST00000324288 K7ERS5 55 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 LINC00269Q8N2A0 174 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 FAM19A1Q7Z5A9 133 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 KLK5Q9Y337 293 aaPredicted RBP5.99□□□□□ -1.45
CIITA-201ENST00000324288 KAAG1Q9UBP8 84 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 C19orf71A6NCJ1 209 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 ZNF80P51504 273 aaPredicted RBP5.99□□□□□ -1.45
CIITA-201ENST00000324288 Q6Q795 121 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 CELA1Q9UNI1 258 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 C4orf3Q8WVX3 66 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 MGAM2Q2M2H8 2515 aa5.99□□□□□ -1.45
CIITA-201ENST00000324288 PDE6GP18545 87 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 SPINK6Q6UWN8 80 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 RETNQ9HD89 108 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 SERP2Q8N6R1 65 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 UFSP1Q6NVU6 142 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 CRYGDP07320 174 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 E7EUB6 86 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 IGF1P05019 195 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 SMAD5-AS1Q9Y6J3 95 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 GPHB5Q86YW7 130 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 XGP55808 180 aa5.98□□□□□ -1.45
CIITA-201ENST00000324288 C11orf45Q8TAV5 145 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 Q8N9W7 124 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 A8MZ25 164 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 ATP5EP2Q5VTU8 51 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 LINC00526Q96FQ7 95 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 LENEPQ9Y5L5 61 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 DNAJC9-AS1A6NH13 148 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 ZNF22P17026 224 aaPredicted RBP5.97□□□□□ -1.45
CIITA-201ENST00000324288 XAGE1AQ9HD64 81 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 Q6ZTI0 123 aa5.97□□□□□ -1.45
CIITA-201ENST00000324288 M0R2N4 97 aa5.96□□□□□ -1.45
CIITA-201ENST00000324288 LINC01548A6NM66 108 aa5.96□□□□□ -1.45
CIITA-201ENST00000324288 CDKN2A-AS1Q9UH64 79 aa5.96□□□□□ -1.46
CIITA-201ENST00000324288 TRBV6-1A0A0K0K1D8 114 aa5.96□□□□□ -1.46
CIITA-201ENST00000324288 PLA2G2CQ5R387 149 aa5.96□□□□□ -1.46
CIITA-201ENST00000324288 RETNLBQ9BQ08 111 aa5.96□□□□□ -1.46
CIITA-201ENST00000324288 CENPEQ02224 2701 aa5.96□□□□□ -1.46
CIITA-201ENST00000324288 REG3AQ06141 175 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 IGLV2-18A0A075B6J9 118 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 IGLV2-14P01704 120 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 ADORA2A-AS1P86434 159 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 Q8N7P7 452 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 FAM222AQ5U5X8 452 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 MAP6D1Q9H9H5 199 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 PROK1P58294 105 aa5.95□□□□□ -1.46
CIITA-201ENST00000324288 SMIM9A6NGZ8 99 aa5.94□□□□□ -1.46
CIITA-201ENST00000324288 PIP4P1Q86T03 277 aa5.94□□□□□ -1.46
CIITA-201ENST00000324288 ZFAND2AQ8N6M9 145 aa5.94□□□□□ -1.46
CIITA-201ENST00000324288 RNF185Q96GF1 192 aa5.94□□□□□ -1.46
CIITA-201ENST00000324288 CHCHD10Q8WYQ3 142 aaPredicted RBP5.94□□□□□ -1.46
CIITA-201ENST00000324288 PRM2P04554 102 aa5.94□□□□□ -1.46
CIITA-201ENST00000324288 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 PSPHP1O15172 72 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 TRBV6-5A0A0K0K1A5 114 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 TMEM223A0PJW6 202 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 COX7CP15954 63 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 LINC00482Q8N8I6 264 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 CSDC2Q9Y534 153 aaKnown RBP5.93□□□□□ -1.46
CIITA-201ENST00000324288 C2orf91Q6ZV80 131 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 C9orf85Q96MD7 179 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 CRIP1P50238 77 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 TRBV10-1A0A0K0K1A3 114 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 Q8N976 141 aa5.93□□□□□ -1.46
CIITA-201ENST00000324288 ATP5EP56381 51 aaPredicted RBP5.92□□□□□ -1.46
CIITA-201ENST00000324288 Q6ZS46 218 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 LINC00308Q8TCZ7 52 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 A0A0J9YX75 114 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 MYCNOSP40205 109 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 LRRC75A-AS1Q8N1F1 130 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 FAM19A3Q7Z5A8 133 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 H7C423 109 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 MBD6Q96DN6 1003 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 C14orf177Q52M58 125 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 CCDC140Q96MF4 163 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 IGLV9-49A0A0B4J1Y8 123 aa5.92□□□□□ -1.46
CIITA-201ENST00000324288 GAS8-AS1O95177 125 aa5.91□□□□□ -1.46
CIITA-201ENST00000324288 CCKP06307 115 aa5.91□□□□□ -1.46
CIITA-201ENST00000324288 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
CIITA-201ENST00000324288 PRO0255Q9UI72 69 aa5.91□□□□□ -1.46
CIITA-201ENST00000324288 C11orf1Q9H5F2 150 aa5.91□□□□□ -1.46
CIITA-201ENST00000324288 BAHCC1Q9P281 2608 aa5.91□□□□□ -1.46
CIITA-201ENST00000324288 RPL37AP8A6NKH3 93 aa5.91□□□□□ -1.46
CIITA-201ENST00000324288 KRTAP27-1Q3LI81 207 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms