RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 IGHV3-53P01767 116 aa18.2■□□□□ 0.5
SENP3-201ENST00000321337 TIMM17BO60830 172 aa18.2■□□□□ 0.5
SENP3-201ENST00000321337 POLQO75417 2590 aa18.2■□□□□ 0.5
SENP3-201ENST00000321337 DEFB121Q5J5C9 76 aa18.19■□□□□ 0.5
SENP3-201ENST00000321337 IGLV5-45A0A087WSX0 123 aa18.19■□□□□ 0.5
SENP3-201ENST00000321337 ZNF702PQ9H963 129 aa18.19■□□□□ 0.5
SENP3-201ENST00000321337 LINC00242Q5T6M2 205 aa18.19■□□□□ 0.5
SENP3-201ENST00000321337 DGAT2L7PQ6IED9 249 aa18.19■□□□□ 0.5
SENP3-201ENST00000321337 UBE2E2Q96LR5 201 aa18.18■□□□□ 0.5
SENP3-201ENST00000321337 CHCHD5Q9BSY4 110 aa18.18■□□□□ 0.5
SENP3-201ENST00000321337 A8MTW9 85 aa18.17■□□□□ 0.5
SENP3-201ENST00000321337 TIRAPP58753 221 aa18.17■□□□□ 0.5
SENP3-201ENST00000321337 USP9XQ93008 2570 aaPredicted RBP18.17■□□□□ 0.5
SENP3-201ENST00000321337 TRAV13-1A0A0B4J241 112 aa18.15■□□□□ 0.5
SENP3-201ENST00000321337 C3orf56Q8N813 242 aa18.15■□□□□ 0.5
SENP3-201ENST00000321337 MAP6D1Q9H9H5 199 aa18.15■□□□□ 0.5
SENP3-201ENST00000321337 AKAP9Q99996 3911 aa18.15■□□□□ 0.5
SENP3-201ENST00000321337 IGLV5-39A0A0G2JS06 123 aa18.14■□□□□ 0.49
SENP3-201ENST00000321337 FAM240AA0A1B0GVK7 77 aa18.13■□□□□ 0.49
SENP3-201ENST00000321337 SMIM1B2RUZ4 78 aa18.13■□□□□ 0.49
SENP3-201ENST00000321337 RS1O15537 224 aa18.13■□□□□ 0.49
SENP3-201ENST00000321337 CIRBPQ14011 172 aaKnown RBP18.13■□□□□ 0.49
SENP3-201ENST00000321337 VPREB3Q9UKI3 123 aa18.13■□□□□ 0.49
SENP3-201ENST00000321337 XCL2Q9UBD3 114 aa18.12■□□□□ 0.49
SENP3-201ENST00000321337 BEAN1Q3B7T3 259 aa18.12■□□□□ 0.49
SENP3-201ENST00000321337 SMCR5Q8TEV8 140 aa18.12■□□□□ 0.49
SENP3-201ENST00000321337 C2CD3Q4AC94 2353 aa18.11■□□□□ 0.49
SENP3-201ENST00000321337 DNAJC30Q96LL9 226 aa18.11■□□□□ 0.49
SENP3-201ENST00000321337 COX7A2LO14548 114 aa18.11■□□□□ 0.49
SENP3-201ENST00000321337 FBN2P35556 2912 aa18.1■□□□□ 0.49
SENP3-201ENST00000321337 FAM218AQ96MZ4 157 aa18.1■□□□□ 0.49
SENP3-201ENST00000321337 MRPL23Q16540 153 aaKnown RBP18.09■□□□□ 0.49
SENP3-201ENST00000321337 PIK3CD-AS1Q5SR53 167 aa18.09■□□□□ 0.49
SENP3-201ENST00000321337 NTM-AS1Q6ZSK4 140 aa18.09■□□□□ 0.49
SENP3-201ENST00000321337 LINC01356Q8N9X3 169 aa18.09■□□□□ 0.49
SENP3-201ENST00000321337 PRORYQ9H606 182 aa18.09■□□□□ 0.49
SENP3-201ENST00000321337 HERVK_113P63121 156 aa18.08■□□□□ 0.49
SENP3-201ENST00000321337 CENPEQ02224 2701 aa18.08■□□□□ 0.49
SENP3-201ENST00000321337 SHISA2Q6UWI4 295 aa18.08■□□□□ 0.49
SENP3-201ENST00000321337 MEIG1Q5JSS6 88 aa18.08■□□□□ 0.48
SENP3-201ENST00000321337 PRIMA1Q86XR5 153 aa18.07■□□□□ 0.48
SENP3-201ENST00000321337 C22orf24Q9Y442 160 aa18.07■□□□□ 0.48
SENP3-201ENST00000321337 PKD1L2Q7Z442 2459 aa18.07■□□□□ 0.48
SENP3-201ENST00000321337 DOPEY1Q5JWR5 2465 aa18.07■□□□□ 0.48
SENP3-201ENST00000321337 TRBV7-7A0A0K0K1E9 115 aa18.06■□□□□ 0.48
SENP3-201ENST00000321337 DAZ2Q13117 558 aaKnown RBP18.06■□□□□ 0.48
SENP3-201ENST00000321337 KHDC1LQ5JSQ8 128 aa18.06■□□□□ 0.48
SENP3-201ENST00000321337 DAZ4Q86SG3 579 aaKnown RBP18.06■□□□□ 0.48
SENP3-201ENST00000321337 DAZ3Q9NR90 486 aaKnown RBP18.06■□□□□ 0.48
SENP3-201ENST00000321337 MYO9AB2RTY4 2548 aa18.06■□□□□ 0.48
SENP3-201ENST00000321337 TRGV1A0A0A0MS02 117 aa18.05■□□□□ 0.48
SENP3-201ENST00000321337 INSP01308 110 aa18.05■□□□□ 0.48
SENP3-201ENST00000321337 Q96MF0 132 aa18.05■□□□□ 0.48
SENP3-201ENST00000321337 NOTCH3Q9UM47 2321 aa18.05■□□□□ 0.48
SENP3-201ENST00000321337 A0A096LNT2 108 aa18.04■□□□□ 0.48
SENP3-201ENST00000321337 Q6YL49 198 aa18.04■□□□□ 0.48
SENP3-201ENST00000321337 SMIM20Q8N5G0 67 aa18.04■□□□□ 0.48
SENP3-201ENST00000321337 CHD6Q8TD26 2715 aa18.04■□□□□ 0.48
SENP3-201ENST00000321337 F5H768 121 aa18.03■□□□□ 0.48
SENP3-201ENST00000321337 ANKRD17O75179 2603 aaKnown RBP18.03■□□□□ 0.48
SENP3-201ENST00000321337 C1orf158Q8N1D5 194 aa18.02■□□□□ 0.48
SENP3-201ENST00000321337 FAM236AA0A1B0GUQ0 79 aa18.02■□□□□ 0.48
SENP3-201ENST00000321337 FAM236BA0A1B0GV22 79 aa18.02■□□□□ 0.48
SENP3-201ENST00000321337 DYNLRB2Q8TF09 96 aa18.02■□□□□ 0.48
SENP3-201ENST00000321337 BAALC-AS2P0C853 105 aa18.01■□□□□ 0.47
SENP3-201ENST00000321337 Q6ZTI0 123 aa18.01■□□□□ 0.47
SENP3-201ENST00000321337 Q9HAA7 133 aa18.01■□□□□ 0.47
SENP3-201ENST00000321337 DEFB114Q30KQ6 69 aa18.01■□□□□ 0.47
SENP3-201ENST00000321337 TEX15Q9BXT5 2789 aa17.99■□□□□ 0.47
SENP3-201ENST00000321337 CDC42SE2Q9NRR3 84 aa17.99■□□□□ 0.47
SENP3-201ENST00000321337 NBPF19A0A087WUL8 3843 aa17.99■□□□□ 0.47
SENP3-201ENST00000321337 WNK1Q9H4A3 2382 aa17.99■□□□□ 0.47
SENP3-201ENST00000321337 ODF3L2Q3SX64 289 aa17.99■□□□□ 0.47
SENP3-201ENST00000321337 PEMTQ9UBM1 199 aa17.97■□□□□ 0.47
SENP3-201ENST00000321337 NIPBLQ6KC79 2804 aaeCLIP17.97■□□□□ 0.47
SENP3-201ENST00000321337 FAM19A3Q7Z5A8 133 aa17.97■□□□□ 0.47
SENP3-201ENST00000321337 K7EQD1 137 aa17.95■□□□□ 0.46
SENP3-201ENST00000321337 RPL36AP83881 106 aaKnown RBP17.95■□□□□ 0.46
SENP3-201ENST00000321337 RPL36ALQ969Q0 106 aaKnown RBP17.95■□□□□ 0.46
SENP3-201ENST00000321337 IL17DQ8TAD2 202 aa17.94■□□□□ 0.46
SENP3-201ENST00000321337 TRACP01848 142 aa17.94■□□□□ 0.46
SENP3-201ENST00000321337 MYO18BQ8IUG5 2567 aa17.94■□□□□ 0.46
SENP3-201ENST00000321337 LOC100131303A0A0U1RQF7 123 aa17.93■□□□□ 0.46
SENP3-201ENST00000321337 LINC00337Q8N6G1 96 aa17.93■□□□□ 0.46
SENP3-201ENST00000321337 FSHBP01225 129 aa17.93■□□□□ 0.46
SENP3-201ENST00000321337 IGKV3OR2-268A0A0C4DH90 116 aa17.92■□□□□ 0.46
SENP3-201ENST00000321337 ACYP1P07311 99 aa17.92■□□□□ 0.46
SENP3-201ENST00000321337 HERV-K104P63124 156 aa17.92■□□□□ 0.46
SENP3-201ENST00000321337 C9orf129Q5T035 196 aaKnown RBP17.92■□□□□ 0.46
SENP3-201ENST00000321337 C11orf44Q8N8P7 122 aa17.92■□□□□ 0.46
SENP3-201ENST00000321337 J3QLI3 93 aa17.92■□□□□ 0.46
SENP3-201ENST00000321337 DSCR9P59020 149 aa17.92■□□□□ 0.46
SENP3-201ENST00000321337 CSDC2Q9Y534 153 aaKnown RBP17.92■□□□□ 0.46
SENP3-201ENST00000321337 ZNF469Q96JG9 3925 aaPredicted RBP17.92■□□□□ 0.46
SENP3-201ENST00000321337 C4orf3Q8WVX3 66 aa17.91■□□□□ 0.46
SENP3-201ENST00000321337 IGSF10Q6WRI0 2623 aa17.9■□□□□ 0.46
SENP3-201ENST00000321337 IGKV2-28A0A075B6P5 120 aa17.9■□□□□ 0.46
SENP3-201ENST00000321337 IGKV2D-28P01615 120 aa17.9■□□□□ 0.46
SENP3-201ENST00000321337 STHQ8IWL8 128 aa17.9■□□□□ 0.46
SENP3-201ENST00000321337 MIR7-3HGQ8N6C7 128 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms