RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MIAQ16674 131 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 KRTAP26-1Q6PEX3 210 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 ATP5L2Q7Z4Y8 100 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 PHOX2AO14813 284 aa9.15□□□□□ -0.94
RPP40-201ENST00000319533 UBE2L6O14933 153 aa9.15□□□□□ -0.94
RPP40-201ENST00000319533 PRSS1P07477 247 aa9.15□□□□□ -0.94
RPP40-201ENST00000319533 CAMPP49913 170 aa9.15□□□□□ -0.94
RPP40-201ENST00000319533 RBX1P62877 108 aa9.15□□□□□ -0.94
RPP40-201ENST00000319533 RIGQ13278 110 aa9.15□□□□□ -0.94
RPP40-201ENST00000319533 TMEM243Q9BU79 118 aa9.15□□□□□ -0.94
RPP40-201ENST00000319533 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
RPP40-201ENST00000319533 AMTP48728 403 aa9.13□□□□□ -0.95
RPP40-201ENST00000319533 SDIM1Q6ZPB5 146 aa9.13□□□□□ -0.95
RPP40-201ENST00000319533 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
RPP40-201ENST00000319533 TMEM191AQ9H0A3 160 aa9.13□□□□□ -0.95
RPP40-201ENST00000319533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.13□□□□□ -0.95
RPP40-201ENST00000319533 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
RPP40-201ENST00000319533 HLA-DQA1P01909 254 aa9.12□□□□□ -0.95
RPP40-201ENST00000319533 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
RPP40-201ENST00000319533 GNB1LQ9BYB4 327 aa9.12□□□□□ -0.95
RPP40-201ENST00000319533 A0A1B0GW15 77 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 PANO1I0J062 215 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 NCR2O95944 276 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 TRGC2P03986 189 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 CIRBPQ14011 172 aaKnown RBP9.11□□□□□ -0.95
RPP40-201ENST00000319533 LINC00269Q8N2A0 174 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 MRAP2Q96G30 205 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 RNF185Q96GF1 192 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 TRAPPC1Q9Y5R8 145 aa9.11□□□□□ -0.95
RPP40-201ENST00000319533 A0A1B0GUV1 79 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 APCSP02743 223 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 FABP9Q0Z7S8 132 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 KIAA1644Q3SXP7 199 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 CLPSL2Q6UWE3 100 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 ST20Q9HBF5 79 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 TNXBP22105 4242 aa9.1□□□□□ -0.95
RPP40-201ENST00000319533 TRBV6-5A0A0K0K1A5 114 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 I3L3M4 83 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 MT-ND6P03923 174 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 RAB4AP20338 218 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 PMCHP20382 165 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.95
RPP40-201ENST00000319533 REG3AQ06141 175 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 COX19Q49B96 90 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 Q6ZRU5 148 aa9.09□□□□□ -0.95
RPP40-201ENST00000319533 GAS8-AS1O95177 125 aa9.08□□□□□ -0.96
RPP40-201ENST00000319533 S100A8P05109 93 aa9.08□□□□□ -0.96
RPP40-201ENST00000319533 FAM104BQ5XKR9 115 aa9.08□□□□□ -0.96
RPP40-201ENST00000319533 AMMECR1LQ6DCA0 310 aa9.08□□□□□ -0.96
RPP40-201ENST00000319533 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
RPP40-201ENST00000319533 SMKR1H3BMG3 65 aa9.07□□□□□ -0.96
RPP40-201ENST00000319533 PPP1R17O96001 155 aa9.07□□□□□ -0.96
RPP40-201ENST00000319533 MRPL51Q4U2R6 128 aaKnown RBP9.07□□□□□ -0.96
RPP40-201ENST00000319533 IGLV4-60A0A075B6I1 120 aa9.06□□□□□ -0.96
RPP40-201ENST00000319533 TRAV8-4A0A0B4J246 113 aa9.06□□□□□ -0.96
RPP40-201ENST00000319533 H7C423 109 aa9.06□□□□□ -0.96
RPP40-201ENST00000319533 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
RPP40-201ENST00000319533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.05□□□□□ -0.96
RPP40-201ENST00000319533 IGKV2-29A2NJV5 120 aaPredicted RBP9.05□□□□□ -0.96
RPP40-201ENST00000319533 C1orf196B1AJZ1 125 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BKO60814 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BJP06899 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BOP23527 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BBP33778 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BDP58876 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BCP62807 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST2H2BEQ16778 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.05□□□□□ -0.96
RPP40-201ENST00000319533 RNASEKQ6P5S7 137 aaKnown RBP9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BHQ93079 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BNQ99877 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 HIST1H2BMQ99879 126 aa9.05□□□□□ -0.96
RPP40-201ENST00000319533 LRP2P98164 4655 aa9.04□□□□□ -0.96
RPP40-201ENST00000319533 IGLV10-54A0A075B6I4 117 aa9.04□□□□□ -0.96
RPP40-201ENST00000319533 D6R8Y8 96 aa9.04□□□□□ -0.96
RPP40-201ENST00000319533 SLPIP03973 132 aa9.04□□□□□ -0.96
RPP40-201ENST00000319533 ALKBH7Q9BT30 221 aaPredicted RBP9.04□□□□□ -0.96
RPP40-201ENST00000319533 IGHV3-64A0A075B6Q5 118 aa9.03□□□□□ -0.96
RPP40-201ENST00000319533 TRBV27A0A0K0K1C4 114 aa9.03□□□□□ -0.96
RPP40-201ENST00000319533 VCYO14598 125 aa9.03□□□□□ -0.96
RPP40-201ENST00000319533 TSHBP01222 138 aa9.03□□□□□ -0.96
RPP40-201ENST00000319533 FGF6P10767 208 aa9.03□□□□□ -0.96
RPP40-201ENST00000319533 ZNF25P17030 456 aaPredicted RBP9.03□□□□□ -0.96
RPP40-201ENST00000319533 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
RPP40-201ENST00000319533 TMEM101Q96IK0 257 aa9.03□□□□□ -0.96
RPP40-201ENST00000319533 IGKV3OR2-268A0A0C4DH90 116 aa9.02□□□□□ -0.97
RPP40-201ENST00000319533 hDV102S1A0JD36 115 aa9.02□□□□□ -0.97
RPP40-201ENST00000319533 NPYP01303 97 aa9.02□□□□□ -0.97
RPP40-201ENST00000319533 FCER1GP30273 86 aa9.02□□□□□ -0.97
RPP40-201ENST00000319533 CKS2P33552 79 aa9.02□□□□□ -0.97
RPP40-201ENST00000319533 SUMO2P61956 95 aaKnown RBP9.02□□□□□ -0.97
RPP40-201ENST00000319533 NRACQ8N912 160 aa9.02□□□□□ -0.97
RPP40-201ENST00000319533 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
RPP40-201ENST00000319533 A0A087WYN8 130 aa9.01□□□□□ -0.97
RPP40-201ENST00000319533 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms