RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 PIK3CD-AS1Q5SR53 167 aa7.01□□□□□ -1.29
RPGR-201ENST00000318842 LINC00694P0DN24 101 aa7.01□□□□□ -1.29
RPGR-201ENST00000318842 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
RPGR-201ENST00000318842 LENEPQ9Y5L5 61 aa7.01□□□□□ -1.29
RPGR-201ENST00000318842 RBMY1BA6NDE4 496 aaKnown RBP7□□□□□ -1.29
RPGR-201ENST00000318842 RBMY1EA6NEQ0 496 aaKnown RBP7□□□□□ -1.29
RPGR-201ENST00000318842 RBMY1DP0C7P1 496 aaKnown RBP7□□□□□ -1.29
RPGR-201ENST00000318842 GNLYP22749 145 aa7□□□□□ -1.29
RPGR-201ENST00000318842 MEIG1Q5JSS6 88 aa7□□□□□ -1.29
RPGR-201ENST00000318842 LYRM7Q5U5X0 104 aa7□□□□□ -1.29
RPGR-201ENST00000318842 SMCR5Q8TEV8 140 aa7□□□□□ -1.29
RPGR-201ENST00000318842 UBE2E2Q96LR5 201 aa7□□□□□ -1.29
RPGR-201ENST00000318842 DOPEY1Q5JWR5 2465 aa7□□□□□ -1.29
RPGR-201ENST00000318842 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
RPGR-201ENST00000318842 MRPL23Q16540 153 aaKnown RBP6.99□□□□□ -1.29
RPGR-201ENST00000318842 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
RPGR-201ENST00000318842 SOSTDC1Q6X4U4 206 aa6.99□□□□□ -1.29
RPGR-201ENST00000318842 TMEM126AQ9H061 195 aa6.99□□□□□ -1.29
RPGR-201ENST00000318842 C11orf68Q9H3H3 251 aaKnown RBP6.99□□□□□ -1.29
RPGR-201ENST00000318842 TRGV11A0A075B6L2 103 aa6.99□□□□□ -1.29
RPGR-201ENST00000318842 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
RPGR-201ENST00000318842 FBXL19-AS1Q494R0 122 aa6.99□□□□□ -1.29
RPGR-201ENST00000318842 VWFP04275 2813 aa6.99□□□□□ -1.29
RPGR-201ENST00000318842 Q9H8V8 135 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 DEFB112Q30KQ8 113 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 PAPPA-AS1Q5QFB9 102 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 FAM218AQ96MZ4 157 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 XCL2Q9UBD3 114 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 ITPR3Q14573 2671 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 NSUN5P1Q3KNT7 163 aa6.98□□□□□ -1.29
RPGR-201ENST00000318842 VSIG2Q96IQ7 327 aa6.97□□□□□ -1.29
RPGR-201ENST00000318842 DNAJC30Q96LL9 226 aa6.97□□□□□ -1.29
RPGR-201ENST00000318842 CHCHD7Q9BUK0 85 aa6.97□□□□□ -1.29
RPGR-201ENST00000318842 LOC107984640A0A0U1RRK4 108 aa6.96□□□□□ -1.29
RPGR-201ENST00000318842 A0A1W2PRX2 142 aa6.96□□□□□ -1.29
RPGR-201ENST00000318842 A6NDX4 124 aa6.96□□□□□ -1.29
RPGR-201ENST00000318842 PPP1R17O96001 155 aa6.96□□□□□ -1.29
RPGR-201ENST00000318842 TMEM61Q8N0U2 210 aa6.96□□□□□ -1.29
RPGR-201ENST00000318842 TMEM101Q96IK0 257 aa6.96□□□□□ -1.29
RPGR-201ENST00000318842 FLNAP21333 2647 aaKnown RBP6.96□□□□□ -1.29
RPGR-201ENST00000318842 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
RPGR-201ENST00000318842 SNRPD3P62318 126 aaKnown RBP6.96□□□□□ -1.3
RPGR-201ENST00000318842 HIVEP2P31629 2446 aa6.96□□□□□ -1.3
RPGR-201ENST00000318842 PIMREGQ9BSJ6 248 aa6.96□□□□□ -1.3
RPGR-201ENST00000318842 UBE2D4Q9Y2X8 147 aa6.96□□□□□ -1.3
RPGR-201ENST00000318842 IGLV1-40P01703 118 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 MIAQ16674 131 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 TRBV6-5A0A0K0K1A5 114 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 LOC100131303A0A0U1RQF7 123 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 K7EQG2 157 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 KLRB1Q12918 225 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
RPGR-201ENST00000318842 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.94□□□□□ -1.3
RPGR-201ENST00000318842 ATP5G1P05496 136 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 MED14OSP0DP75 135 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 DGAT2L7PQ6IED9 249 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 LINC01587Q99440 93 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 TRBV30A0A0K0K1B3 111 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 SLPIP03973 132 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 MRPS36P82909 103 aaKnown RBP6.94□□□□□ -1.3
RPGR-201ENST00000318842 USMG5Q96IX5 58 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 WFDC10AQ9H1F0 79 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 Q6Q795 121 aa6.94□□□□□ -1.3
RPGR-201ENST00000318842 PSMB8P28062 276 aa6.93□□□□□ -1.3
RPGR-201ENST00000318842 RHOHQ15669 191 aa6.93□□□□□ -1.3
RPGR-201ENST00000318842 CCL19Q99731 98 aa6.93□□□□□ -1.3
RPGR-201ENST00000318842 PDZD2O15018 2839 aa6.93□□□□□ -1.3
RPGR-201ENST00000318842 USP24Q9UPU5 2620 aa6.93□□□□□ -1.3
RPGR-201ENST00000318842 LST1O00453 97 aa6.93□□□□□ -1.3
RPGR-201ENST00000318842 DAZ2Q13117 558 aaKnown RBP6.93□□□□□ -1.3
RPGR-201ENST00000318842 GAGE2AQ6NT46 116 aa6.93□□□□□ -1.3
RPGR-201ENST00000318842 DAZ4Q86SG3 579 aaKnown RBP6.93□□□□□ -1.3
RPGR-201ENST00000318842 DAZ3Q9NR90 486 aaKnown RBP6.93□□□□□ -1.3
RPGR-201ENST00000318842 A0A087WVE0 104 aa6.92□□□□□ -1.3
RPGR-201ENST00000318842 LINC00308Q8TCZ7 52 aa6.92□□□□□ -1.3
RPGR-201ENST00000318842 TRGV1A0A0A0MS02 117 aa6.92□□□□□ -1.3
RPGR-201ENST00000318842 IGKV3D-7A0A0C4DH55 119 aa6.92□□□□□ -1.3
RPGR-201ENST00000318842 KLK9Q2XQG4 91 aa6.92□□□□□ -1.3
RPGR-201ENST00000318842 PRIMA1Q86XR5 153 aa6.92□□□□□ -1.3
RPGR-201ENST00000318842 Q96MF0 132 aa6.92□□□□□ -1.3
RPGR-201ENST00000318842 COX6CP09669 75 aa6.91□□□□□ -1.3
RPGR-201ENST00000318842 SDIM1Q6ZPB5 146 aa6.91□□□□□ -1.3
RPGR-201ENST00000318842 MSMBP08118 114 aa6.91□□□□□ -1.3
RPGR-201ENST00000318842 LINC00242Q5T6M2 205 aa6.91□□□□□ -1.3
RPGR-201ENST00000318842 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.3
RPGR-201ENST00000318842 Q6ZTI0 123 aa6.9□□□□□ -1.3
RPGR-201ENST00000318842 WFDC9Q8NEX5 89 aa6.9□□□□□ -1.3
RPGR-201ENST00000318842 C22orf24Q9Y442 160 aa6.9□□□□□ -1.3
RPGR-201ENST00000318842 B4DSR2 109 aa6.9□□□□□ -1.3
RPGR-201ENST00000318842 PFN2P35080 140 aa6.9□□□□□ -1.3
RPGR-201ENST00000318842 NTM-AS1Q6ZSK4 140 aa6.9□□□□□ -1.31
RPGR-201ENST00000318842 FAM19A5Q7Z5A7 132 aaPredicted RBP6.9□□□□□ -1.31
RPGR-201ENST00000318842 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.31
RPGR-201ENST00000318842 C14orf132Q9NPU4 83 aa6.9□□□□□ -1.31
RPGR-201ENST00000318842 F8WDY8 70 aa6.89□□□□□ -1.31
RPGR-201ENST00000318842 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms