RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RPL24P83731 157 aaKnown RBP10.19□□□□□ -0.78
VRK3-201ENST00000316763 H3BMG7 143 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 WIPF1O43516 503 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 AZU1P20160 251 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 C1orf158Q8N1D5 194 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 TIMM21Q9BVV7 248 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 UBE2D4Q9Y2X8 147 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 TINCRA0A1B0GVN0 87 aa10.18□□□□□ -0.78
VRK3-201ENST00000316763 IGHV3-64A0A075B6Q5 118 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 TMEM238C9JI98 176 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 OXLD1Q5BKU9 147 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 CEMP1Q6PRD7 247 aaPredicted RBP10.17□□□□□ -0.78
VRK3-201ENST00000316763 IL17DQ8TAD2 202 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 Q9UF83 564 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.17□□□□□ -0.78
VRK3-201ENST00000316763 IGKV2-29A2NJV5 120 aaPredicted RBP10.17□□□□□ -0.78
VRK3-201ENST00000316763 TSPAN13O95857 204 aa10.17□□□□□ -0.78
VRK3-201ENST00000316763 CMYA5Q8N3K9 4069 aa10.16□□□□□ -0.78
VRK3-201ENST00000316763 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
VRK3-201ENST00000316763 IGHV3-30-3P0DP02 117 aa10.16□□□□□ -0.78
VRK3-201ENST00000316763 TMEM263Q8WUH6 116 aaKnown RBP10.16□□□□□ -0.78
VRK3-201ENST00000316763 WFDC10AQ9H1F0 79 aa10.16□□□□□ -0.78
VRK3-201ENST00000316763 LOC107984156A0A0G2JMH3 177 aa10.15□□□□□ -0.78
VRK3-201ENST00000316763 CFC1BP0CG36 223 aa10.15□□□□□ -0.78
VRK3-201ENST00000316763 CFC1P0CG37 223 aa10.15□□□□□ -0.78
VRK3-201ENST00000316763 WFDC2Q14508 124 aa10.15□□□□□ -0.78
VRK3-201ENST00000316763 ARL17AQ8IVW1 177 aa10.15□□□□□ -0.78
VRK3-201ENST00000316763 IGHV1-58A0A0C4DH39 117 aa10.15□□□□□ -0.79
VRK3-201ENST00000316763 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.79
VRK3-201ENST00000316763 J3QR89 54 aa10.15□□□□□ -0.79
VRK3-201ENST00000316763 RPL36AP83881 106 aaKnown RBP10.15□□□□□ -0.79
VRK3-201ENST00000316763 DGAT2L7PQ6IED9 249 aa10.15□□□□□ -0.79
VRK3-201ENST00000316763 RPL36ALQ969Q0 106 aaKnown RBP10.15□□□□□ -0.79
VRK3-201ENST00000316763 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.79
VRK3-201ENST00000316763 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.79
VRK3-201ENST00000316763 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
VRK3-201ENST00000316763 TEX48A0A1B0GUV7 120 aa10.14□□□□□ -0.79
VRK3-201ENST00000316763 RNASE13Q5GAN3 156 aaKnown RBP10.14□□□□□ -0.79
VRK3-201ENST00000316763 Q6ZUT4 128 aa10.14□□□□□ -0.79
VRK3-201ENST00000316763 C10orf126Q8N4M7 172 aa10.14□□□□□ -0.79
VRK3-201ENST00000316763 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.13□□□□□ -0.79
VRK3-201ENST00000316763 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
VRK3-201ENST00000316763 UBE2D3P61077 147 aa10.13□□□□□ -0.79
VRK3-201ENST00000316763 UBE2D2P62837 147 aa10.13□□□□□ -0.79
VRK3-201ENST00000316763 SMAGPQ0VAQ4 97 aa10.13□□□□□ -0.79
VRK3-201ENST00000316763 K7EQD1 137 aa10.13□□□□□ -0.79
VRK3-201ENST00000316763 GIG44P09565 113 aaPredicted RBP10.13□□□□□ -0.79
VRK3-201ENST00000316763 PSMB2P49721 201 aa10.13□□□□□ -0.79
VRK3-201ENST00000316763 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
VRK3-201ENST00000316763 A4D1N5 150 aa10.12□□□□□ -0.79
VRK3-201ENST00000316763 DAZ2Q13117 558 aaKnown RBP10.12□□□□□ -0.79
VRK3-201ENST00000316763 DAZ4Q86SG3 579 aaKnown RBP10.12□□□□□ -0.79
VRK3-201ENST00000316763 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
VRK3-201ENST00000316763 VSIG2Q96IQ7 327 aa10.12□□□□□ -0.79
VRK3-201ENST00000316763 C1QTNF4Q9BXJ3 329 aa10.12□□□□□ -0.79
VRK3-201ENST00000316763 DAZ3Q9NR90 486 aaKnown RBP10.12□□□□□ -0.79
VRK3-201ENST00000316763 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
VRK3-201ENST00000316763 DNHD1Q96M86 4753 aa10.11□□□□□ -0.79
VRK3-201ENST00000316763 TIRAPP58753 221 aa10.11□□□□□ -0.79
VRK3-201ENST00000316763 Q6ZTI0 123 aa10.11□□□□□ -0.79
VRK3-201ENST00000316763 C16orf74Q96GX8 76 aa10.11□□□□□ -0.79
VRK3-201ENST00000316763 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
VRK3-201ENST00000316763 TRAV8-3A0A0A6YYJ7 113 aa10.11□□□□□ -0.79
VRK3-201ENST00000316763 A0A0B4J2C4 111 aa10.11□□□□□ -0.79
VRK3-201ENST00000316763 CIDEAO60543 219 aa10.1□□□□□ -0.79
VRK3-201ENST00000316763 SCGB1C2P0DMR2 95 aa10.1□□□□□ -0.79
VRK3-201ENST00000316763 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
VRK3-201ENST00000316763 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 KRTAP10-11P60412 298 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 EGFEM1PQ0D2K5 195 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 C21orf62-AS1Q17RA5 79 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 SFTA2Q6UW10 78 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 ERG28Q9UKR5 140 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 MGAM2Q2M2H8 2515 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 RPL35AP18077 110 aaKnown RBP10.09□□□□□ -0.79
VRK3-201ENST00000316763 SPANXDQ9BXN6 97 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 SPANXCQ9NY87 97 aa10.09□□□□□ -0.79
VRK3-201ENST00000316763 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
VRK3-201ENST00000316763 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
VRK3-201ENST00000316763 HERVK_113P63121 156 aa10.08□□□□□ -0.8
VRK3-201ENST00000316763 SH2D6Q7Z4S9 175 aa10.08□□□□□ -0.8
VRK3-201ENST00000316763 CSNK1G2-AS1Q8NCQ2 148 aa10.08□□□□□ -0.8
VRK3-201ENST00000316763 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
VRK3-201ENST00000316763 ZFAND6Q6FIF0 208 aa10.07□□□□□ -0.8
VRK3-201ENST00000316763 MTURNQ8N3F0 131 aa10.07□□□□□ -0.8
VRK3-201ENST00000316763 PRSS2P07478 247 aa10.07□□□□□ -0.8
VRK3-201ENST00000316763 ATP6V0E2Q8NHE4 81 aa10.07□□□□□ -0.8
VRK3-201ENST00000316763 CDKN2A-AS1Q9UH64 79 aa10.07□□□□□ -0.8
VRK3-201ENST00000316763 TRGV2A0A075B6R0 118 aa10.06□□□□□ -0.8
VRK3-201ENST00000316763 GAGE12JA6NER3 117 aa10.06□□□□□ -0.8
VRK3-201ENST00000316763 TIMM17BO60830 172 aa10.06□□□□□ -0.8
VRK3-201ENST00000316763 GAGE4Q13068 117 aa10.06□□□□□ -0.8
VRK3-201ENST00000316763 GAGE5Q13069 117 aa10.06□□□□□ -0.8
VRK3-201ENST00000316763 LITAFQ99732 161 aa10.06□□□□□ -0.8
VRK3-201ENST00000316763 TCL1BO95988 128 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 MIAQ16674 131 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms