RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 C11orf21Q9P2W6 132 aa8.72□□□□□ -1.01
LDLRAD3-201ENST00000315571 HTN1P15515 57 aa8.71□□□□□ -1.01
LDLRAD3-201ENST00000315571 PRIMA1Q86XR5 153 aa8.71□□□□□ -1.01
LDLRAD3-201ENST00000315571 IGHV1-69DA0A0B4J2H0 117 aa8.71□□□□□ -1.02
LDLRAD3-201ENST00000315571 SOCS3O14543 225 aa8.71□□□□□ -1.02
LDLRAD3-201ENST00000315571 SNURFQ9Y675 71 aa8.71□□□□□ -1.02
LDLRAD3-201ENST00000315571 I3L2K1 104 aa8.71□□□□□ -1.02
LDLRAD3-201ENST00000315571 TIMM17BO60830 172 aa8.71□□□□□ -1.02
LDLRAD3-201ENST00000315571 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 LINC01546A6NGU7 62 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 A8MZ25 164 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 FHL2Q14192 279 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 FANCD2OSQ96PS1 177 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 CNFNQ9BYD5 112 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 U3KQE9 123 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 CSMD2Q7Z408 3487 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGHV3OR16-10A0A075B7F0 116 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 PDZD2O15018 2839 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 FAM223BA6NKX1 122 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 SERP1Q9Y6X1 66 aa8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 ASH1LQ9NR48 2969 aaKnown RBP8.7□□□□□ -1.02
LDLRAD3-201ENST00000315571 BUB1B-PAK6H3BSN5 160 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGLV1-47P01700 117 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGLV2-23P01705 113 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 ZNF876PQ49A33 203 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 DPM3Q9P2X0 92 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 K7EIM0 57 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 GNRH2O43555 120 aa8.69□□□□□ -1.02
LDLRAD3-201ENST00000315571 ABCA2Q9BZC7 2435 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 COX7A2LO14548 114 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 SOSTDC1Q6X4U4 206 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 TMEM61Q8N0U2 210 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 MYO9AB2RTY4 2548 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 NDUFC2-KCTD14E9PQ53 114 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 ECSCRQ19T08 205 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 ITPR3Q14573 2671 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 ODF3BA8MYP8 253 aa8.68□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGHV1-69P01742 117 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 HILS1P60008 231 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 MIAQ16674 131 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 MINOS1Q5TGZ0 78 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 MINOS1-NBL1R4GNA1 71 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 SAA4P35542 130 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 BRD3OSQ6XYD6 125 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 TIMM17AQ99595 171 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 PSMB8P28062 276 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 C9orf139Q6ZV77 190 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 CSPG4Q6UVK1 2322 aa8.67□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGHV4-38-2P0DP08 117 aa8.66□□□□□ -1.02
LDLRAD3-201ENST00000315571 AVPP01185 164 aa8.66□□□□□ -1.02
LDLRAD3-201ENST00000315571 FLNAP21333 2647 aaKnown RBP8.66□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGHV7-4-1A0A0J9YVY3 117 aa8.66□□□□□ -1.02
LDLRAD3-201ENST00000315571 TSHBP01222 138 aa8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 XCL1P47992 114 aa8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 ENHOQ6UWT2 76 aa8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 C11orf68Q9H3H3 251 aaKnown RBP8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 XCL2Q9UBD3 114 aa8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 IGHV1-3A0A0C4DH29 117 aa8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 HAMPP81172 84 aa8.65□□□□□ -1.02
LDLRAD3-201ENST00000315571 CSMD1Q96PZ7 3565 aa8.65□□□□□ -1.03
LDLRAD3-201ENST00000315571 CRPP02741 224 aa8.65□□□□□ -1.03
LDLRAD3-201ENST00000315571 SS18Q15532 418 aa8.65□□□□□ -1.03
LDLRAD3-201ENST00000315571 IGIPA6NJ69 53 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 TEX22C9J3V5 150 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 CR1P17927 2039 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 LY6LH3BQJ8 138 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 DCANP1Q8TF63 244 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 LINC00846Q9NV44 126 aa8.64□□□□□ -1.03
LDLRAD3-201ENST00000315571 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 DEFB1P60022 68 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 SUMO4Q6EEV6 95 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 TRBV12-3P01733 135 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 IGF1P05019 195 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 LINC00474Q9P2X8 69 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 F8WEM9 126 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
LDLRAD3-201ENST00000315571 TLN2Q9Y4G6 2542 aa8.62□□□□□ -1.03
LDLRAD3-201ENST00000315571 NCR3O14931 201 aa8.62□□□□□ -1.03
LDLRAD3-201ENST00000315571 Q9H8V8 135 aa8.62□□□□□ -1.03
LDLRAD3-201ENST00000315571 MOB4Q9Y3A3 225 aa8.62□□□□□ -1.03
LDLRAD3-201ENST00000315571 ACANP16112 2415 aa8.62□□□□□ -1.03
LDLRAD3-201ENST00000315571 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
LDLRAD3-201ENST00000315571 Q6JHZ5 121 aa8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 KRTAP1-1Q07627 177 aa8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 NBR2O15453 112 aa8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 SNRPD3P62318 126 aaKnown RBP8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 SMR3AQ99954 134 aa8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 VPS13CQ709C8 3753 aa8.61□□□□□ -1.03
LDLRAD3-201ENST00000315571 ZANQ9Y493 2812 aa8.6□□□□□ -1.03
LDLRAD3-201ENST00000315571 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms