RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 EDN2P20800 178 aa9.99□□□□□ -0.81
RFFL-201ENST00000315249 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
RFFL-201ENST00000315249 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
RFFL-201ENST00000315249 ACANP16112 2415 aa9.98□□□□□ -0.81
RFFL-201ENST00000315249 ETDBQ3ZM63 59 aa9.98□□□□□ -0.81
RFFL-201ENST00000315249 A0A1W2PPM0 123 aa9.98□□□□□ -0.81
RFFL-201ENST00000315249 UFSP1Q6NVU6 142 aa9.98□□□□□ -0.81
RFFL-201ENST00000315249 MTORP42345 2549 aa9.98□□□□□ -0.81
RFFL-201ENST00000315249 CRYBA4P53673 196 aa9.98□□□□□ -0.81
RFFL-201ENST00000315249 C11orf1Q9H5F2 150 aa9.97□□□□□ -0.81
RFFL-201ENST00000315249 TRBV6-4A0A1B0GX49 114 aa9.97□□□□□ -0.81
RFFL-201ENST00000315249 NUPR2A6NF83 97 aa9.97□□□□□ -0.81
RFFL-201ENST00000315249 H0YGX0 51 aa9.97□□□□□ -0.81
RFFL-201ENST00000315249 ANKRD39Q53RE8 183 aa9.97□□□□□ -0.81
RFFL-201ENST00000315249 DLEU1O43261 78 aa9.97□□□□□ -0.81
RFFL-201ENST00000315249 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.81
RFFL-201ENST00000315249 TTTY13Q9BZ97 58 aa9.96□□□□□ -0.81
RFFL-201ENST00000315249 NUPR1O60356 82 aa9.96□□□□□ -0.81
RFFL-201ENST00000315249 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
RFFL-201ENST00000315249 H0Y9J4 135 aa9.96□□□□□ -0.82
RFFL-201ENST00000315249 Q6ZVH6 145 aa9.96□□□□□ -0.82
RFFL-201ENST00000315249 PPDPFLQ8WWR9 84 aa9.96□□□□□ -0.82
RFFL-201ENST00000315249 DCANP1Q8TF63 244 aa9.95□□□□□ -0.82
RFFL-201ENST00000315249 C5orf42Q9H799 3197 aa9.95□□□□□ -0.82
RFFL-201ENST00000315249 UBE2D1P51668 147 aa9.95□□□□□ -0.82
RFFL-201ENST00000315249 NTN5Q8WTR8 489 aaPredicted RBP9.94□□□□□ -0.82
RFFL-201ENST00000315249 COX7BP24311 80 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 NREPQ16612 68 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 ANKRD29Q8N6D5 301 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 U3KQK5 164 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 E9PLD3 99 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 F8W1H4 67 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 MIAQ16674 131 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 CRIP1P50238 77 aa9.94□□□□□ -0.82
RFFL-201ENST00000315249 H7C423 109 aa9.93□□□□□ -0.82
RFFL-201ENST00000315249 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
RFFL-201ENST00000315249 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
RFFL-201ENST00000315249 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
RFFL-201ENST00000315249 PKD1L2Q7Z442 2459 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 ODF1Q14990 250 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 LELP1Q5T871 98 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 G3V4G9 280 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 M0QY20 66 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 FOXI1Q12951 378 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 RBX1P62877 108 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 CDKN2A-AS1Q9UH64 79 aa9.92□□□□□ -0.82
RFFL-201ENST00000315249 C16orf95Q9H693 158 aa9.91□□□□□ -0.82
RFFL-201ENST00000315249 IGLC6P0CF74 106 aa9.91□□□□□ -0.82
RFFL-201ENST00000315249 IGLV2-8P01709 118 aa9.9□□□□□ -0.82
RFFL-201ENST00000315249 MRPL52Q86TS9 123 aaKnown RBP9.9□□□□□ -0.82
RFFL-201ENST00000315249 IGLV1-51P01701 117 aa9.9□□□□□ -0.82
RFFL-201ENST00000315249 K7EP34 96 aa9.9□□□□□ -0.82
RFFL-201ENST00000315249 PRR9Q5T870 116 aa9.9□□□□□ -0.83
RFFL-201ENST00000315249 NPSP0C0P6 89 aa9.89□□□□□ -0.83
RFFL-201ENST00000315249 ODF3L2Q3SX64 289 aa9.89□□□□□ -0.83
RFFL-201ENST00000315249 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
RFFL-201ENST00000315249 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
RFFL-201ENST00000315249 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
RFFL-201ENST00000315249 MLST8Q9BVC4 326 aa9.89□□□□□ -0.83
RFFL-201ENST00000315249 Q6ZTC4 211 aa9.88□□□□□ -0.83
RFFL-201ENST00000315249 IGLV4-3A0A075B6K6 122 aa9.88□□□□□ -0.83
RFFL-201ENST00000315249 COL27A1Q8IZC6 1860 aaPredicted RBP9.88□□□□□ -0.83
RFFL-201ENST00000315249 H3BQ85 93 aa9.88□□□□□ -0.83
RFFL-201ENST00000315249 RNASE3P12724 160 aaKnown RBP9.88□□□□□ -0.83
RFFL-201ENST00000315249 MRGPRG-AS1Q2M3A8 158 aa9.88□□□□□ -0.83
RFFL-201ENST00000315249 RBM3P98179 157 aaKnown RBP9.87□□□□□ -0.83
RFFL-201ENST00000315249 TDRG1Q3Y452 100 aa9.87□□□□□ -0.83
RFFL-201ENST00000315249 PCSK5Q92824 1860 aa9.87□□□□□ -0.83
RFFL-201ENST00000315249 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
RFFL-201ENST00000315249 PRRC2CQ9Y520 2896 aaKnown RBP9.87□□□□□ -0.83
RFFL-201ENST00000315249 F8P00451 2351 aa9.86□□□□□ -0.83
RFFL-201ENST00000315249 K7EP13 123 aa9.86□□□□□ -0.83
RFFL-201ENST00000315249 PPDPFQ9H3Y8 114 aa9.86□□□□□ -0.83
RFFL-201ENST00000315249 UBE2D4Q9Y2X8 147 aa9.86□□□□□ -0.83
RFFL-201ENST00000315249 EPG5Q9HCE0 2579 aa9.86□□□□□ -0.83
RFFL-201ENST00000315249 TMEM256-PLSCR3K7ERE1 68 aa9.86□□□□□ -0.83
RFFL-201ENST00000315249 FXYD2P54710 66 aa9.85□□□□□ -0.83
RFFL-201ENST00000315249 KLLNB2CW77 178 aa9.85□□□□□ -0.83
RFFL-201ENST00000315249 CHKB-CPT1BH3BT56 60 aa9.85□□□□□ -0.83
RFFL-201ENST00000315249 HRCT1Q6UXD1 115 aa9.85□□□□□ -0.83
RFFL-201ENST00000315249 A0A1B0GXF2 115 aa9.85□□□□□ -0.83
RFFL-201ENST00000315249 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
RFFL-201ENST00000315249 RPL37AP8A6NKH3 93 aa9.84□□□□□ -0.83
RFFL-201ENST00000315249 PIK3CD-AS1Q5SR53 167 aa9.84□□□□□ -0.83
RFFL-201ENST00000315249 CDPF1Q6NVV7 123 aa9.84□□□□□ -0.83
RFFL-201ENST00000315249 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
RFFL-201ENST00000315249 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
RFFL-201ENST00000315249 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
RFFL-201ENST00000315249 IGLV5-52A0A0A0MRZ9 124 aa9.83□□□□□ -0.84
RFFL-201ENST00000315249 C14orf132Q9NPU4 83 aa9.82□□□□□ -0.84
RFFL-201ENST00000315249 SPANXCQ9NY87 97 aa9.82□□□□□ -0.84
RFFL-201ENST00000315249 A0A1B0GX51 115 aa9.82□□□□□ -0.84
RFFL-201ENST00000315249 IGLV2-11P01706 119 aa9.81□□□□□ -0.84
RFFL-201ENST00000315249 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
RFFL-201ENST00000315249 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
RFFL-201ENST00000315249 C11orf21Q9P2W6 132 aa9.81□□□□□ -0.84
RFFL-201ENST00000315249 UBE2D3P61077 147 aa9.81□□□□□ -0.84
RFFL-201ENST00000315249 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
RFFL-201ENST00000315249 RNF185Q96GF1 192 aa9.81□□□□□ -0.84
RFFL-201ENST00000315249 JMJD7-PLA2G4BH0Y9G9 81 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms