RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 C15orf53Q8NAA6 179 aa13.5□□□□□ -0.25
CDK5R1-201ENST00000313401 CFAP46Q8IYW2 2715 aa13.5□□□□□ -0.25
CDK5R1-201ENST00000313401 TRBV6-5A0A0K0K1A5 114 aa13.5□□□□□ -0.25
CDK5R1-201ENST00000313401 DEFB114Q30KQ6 69 aa13.5□□□□□ -0.25
CDK5R1-201ENST00000313401 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
CDK5R1-201ENST00000313401 Q9UF83 564 aa13.5□□□□□ -0.25
CDK5R1-201ENST00000313401 GAGE2AQ6NT46 116 aa13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 CFAP161Q6P656 301 aa13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 ITPR1Q14643 2758 aa13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 TEX49A0A1B0GTD5 131 aa13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 NDUFA7O95182 113 aa13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 IGHV3-33P01772 117 aa13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 XCL1P47992 114 aa13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 CRIP2P52943 208 aaPredicted RBP13.49□□□□□ -0.25
CDK5R1-201ENST00000313401 KIF25-AS1Q9Y6Z4 181 aa13.48□□□□□ -0.25
CDK5R1-201ENST00000313401 ODF3Q96PU9 254 aa13.48□□□□□ -0.25
CDK5R1-201ENST00000313401 TMEM89A2RUT3 159 aa13.47□□□□□ -0.25
CDK5R1-201ENST00000313401 DEFB4AO15263 64 aa13.47□□□□□ -0.25
CDK5R1-201ENST00000313401 SS18L2Q9UHA2 77 aa13.47□□□□□ -0.25
CDK5R1-201ENST00000313401 K7EQD1 137 aa13.47□□□□□ -0.25
CDK5R1-201ENST00000313401 LINC00315P59091 139 aa13.47□□□□□ -0.25
CDK5R1-201ENST00000313401 TRIAP1O43715 76 aa13.46□□□□□ -0.25
CDK5R1-201ENST00000313401 CRLF1O75462 422 aa13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 Q6ZSN1 163 aa13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 RBMY1BA6NDE4 496 aaKnown RBP13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 RBMY1EA6NEQ0 496 aaKnown RBP13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 RBMY1DP0C7P1 496 aaKnown RBP13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 RBMY1A1P0DJD3 496 aaKnown RBP13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 RBMY1CP0DJD4 496 aa13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 C4orf3Q8WVX3 66 aa13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 TRAV26-1A0A087WT03 109 aa13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 UBE2D1P51668 147 aa13.45□□□□□ -0.26
CDK5R1-201ENST00000313401 IGLV10-54A0A075B6I4 117 aa13.44□□□□□ -0.26
CDK5R1-201ENST00000313401 ITPR3Q14573 2671 aa13.44□□□□□ -0.26
CDK5R1-201ENST00000313401 FLNBO75369 2602 aaKnown RBP13.44□□□□□ -0.26
CDK5R1-201ENST00000313401 ZNF575Q86XF7 245 aa13.44□□□□□ -0.26
CDK5R1-201ENST00000313401 CHD6Q8TD26 2715 aa13.43□□□□□ -0.26
CDK5R1-201ENST00000313401 TMEM86BQ8N661 226 aa13.43□□□□□ -0.26
CDK5R1-201ENST00000313401 CRYBA4P53673 196 aa13.43□□□□□ -0.26
CDK5R1-201ENST00000313401 DNAJC30Q96LL9 226 aa13.43□□□□□ -0.26
CDK5R1-201ENST00000313401 RBMY1FQ15415 496 aaKnown RBP13.42□□□□□ -0.26
CDK5R1-201ENST00000313401 MIAQ16674 131 aa13.42□□□□□ -0.26
CDK5R1-201ENST00000313401 RPL32P62910 135 aaKnown RBP13.42□□□□□ -0.26
CDK5R1-201ENST00000313401 PIK3CD-AS1Q5SR53 167 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 IFITM1P13164 125 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 CSMD1Q96PZ7 3565 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 ZANQ9Y493 2812 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 LOC100131303A0A0U1RQF7 123 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 LINC01546A6NGU7 62 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 POM121L12Q8N7R1 296 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 EDA2RQ9HAV5 297 aa13.41□□□□□ -0.26
CDK5R1-201ENST00000313401 TINCRA0A1B0GVN0 87 aa13.4□□□□□ -0.26
CDK5R1-201ENST00000313401 BAALC-AS2P0C853 105 aa13.4□□□□□ -0.26
CDK5R1-201ENST00000313401 C3orf56Q8N813 242 aa13.4□□□□□ -0.27
CDK5R1-201ENST00000313401 XGP55808 180 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 Q9HAA7 133 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 A0A0B4J2C4 111 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 TRBV10-2A0A0K0K1G8 114 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 CMC4P56277 68 aaPredicted RBP13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 SS18Q15532 418 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 C9orf153Q5TBE3 101 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 MIR7-3HGQ8N6C7 128 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 IGSF10Q6WRI0 2623 aa13.39□□□□□ -0.27
CDK5R1-201ENST00000313401 F5H768 121 aa13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 GYPEP15421 78 aa13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 ADAMTSL4-AS1Q5T5F5 129 aa13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 SND1-IT1Q9HBX3 110 aa13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 UBE2D4Q9Y2X8 147 aa13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 S100A7L2Q5SY68 101 aa13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 DAZ4Q86SG3 579 aaKnown RBP13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 DAZ3Q9NR90 486 aaKnown RBP13.38□□□□□ -0.27
CDK5R1-201ENST00000313401 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
CDK5R1-201ENST00000313401 ANGP03950 147 aaKnown RBP13.37□□□□□ -0.27
CDK5R1-201ENST00000313401 ATP6V0E2Q8NHE4 81 aa13.37□□□□□ -0.27
CDK5R1-201ENST00000313401 TEX15Q9BXT5 2789 aa13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 HIST1H4AP62805 103 aaKnown RBP13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 FAM19A4Q96LR4 140 aa13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 SMIM20Q8N5G0 67 aa13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 HRNRQ86YZ3 2850 aaPredicted RBP13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 DCHS2Q6V1P9 2916 aa13.36□□□□□ -0.27
CDK5R1-201ENST00000313401 LINC00694P0DN24 101 aa13.35□□□□□ -0.27
CDK5R1-201ENST00000313401 PLA2G2AP14555 144 aa13.35□□□□□ -0.27
CDK5R1-201ENST00000313401 RNF183Q96D59 192 aa13.35□□□□□ -0.27
CDK5R1-201ENST00000313401 PYGO1Q9Y3Y4 419 aa13.34□□□□□ -0.27
CDK5R1-201ENST00000313401 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.27
CDK5R1-201ENST00000313401 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.27
CDK5R1-201ENST00000313401 COX7B2Q8TF08 81 aa13.33□□□□□ -0.27
CDK5R1-201ENST00000313401 ATP5G1P05496 136 aa13.33□□□□□ -0.28
CDK5R1-201ENST00000313401 UBE2D3P61077 147 aa13.33□□□□□ -0.28
CDK5R1-201ENST00000313401 UBE2D2P62837 147 aa13.33□□□□□ -0.28
CDK5R1-201ENST00000313401 LINC00308Q8TCZ7 52 aa13.33□□□□□ -0.28
CDK5R1-201ENST00000313401 C16orf74Q96GX8 76 aa13.33□□□□□ -0.28
CDK5R1-201ENST00000313401 COX6A2Q02221 97 aa13.32□□□□□ -0.28
CDK5R1-201ENST00000313401 SMCPP49901 116 aaPredicted RBP13.32□□□□□ -0.28
CDK5R1-201ENST00000313401 DAD1P61803 113 aa13.32□□□□□ -0.28
CDK5R1-201ENST00000313401 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms