RNA–Protein interactions for RNA: ENST00000312373.12

RUNDC3B-201, Transcript of RUN domain containing 3B, humanhuman

TSL 5

Gene RUNDC3B, Length 3,254 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-201ENST00000312373 TRGV1A0A0A0MS02 117 aa3.38□□□□□ -1.87
RUNDC3B-201ENST00000312373 TRAV25A0A0B4J276 109 aa3.38□□□□□ -1.87
RUNDC3B-201ENST00000312373 CCL24O00175 119 aa3.38□□□□□ -1.87
RUNDC3B-201ENST00000312373 SMAGPQ0VAQ4 97 aa3.38□□□□□ -1.87
RUNDC3B-201ENST00000312373 HIST2H2BCQ6DN03 193 aa3.38□□□□□ -1.87
RUNDC3B-201ENST00000312373 CDKN2A-AS1Q9UH64 79 aa3.38□□□□□ -1.87
RUNDC3B-201ENST00000312373 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 LINC00694P0DN24 101 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 ZFAND6Q6FIF0 208 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 Q6ZTI0 123 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 TEN1Q86WV5 123 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 CITED2Q99967 270 aaPredicted RBP3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 SPANXDQ9BXN6 97 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 PRSS2P07478 247 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 COX6A2Q02221 97 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 NTM-AS1Q6ZSK4 140 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 CDIP1Q9H305 208 aa3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
RUNDC3B-201ENST00000312373 NOTCH3Q9UM47 2321 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 NDUFA7O95182 113 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 GIG44P09565 113 aaPredicted RBP3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 TIRAPP58753 221 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 NPC2P61916 151 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 MIAQ16674 131 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 ANKRD29Q8N6D5 301 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 PPDPFLQ8WWR9 84 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 TMEM101Q96IK0 257 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 WFDC10AQ9H1F0 79 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 NF1P21359 2839 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 FLNAP21333 2647 aaKnown RBP3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 AKAP9Q99996 3911 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 C9JAW5 83 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 TRIAP1O43715 76 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 SLC25A20O43772 301 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 KRTAP1-1Q07627 177 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 Q1RN00 199 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 LINC00242Q5T6M2 205 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 SETD2Q9BYW2 2564 aaPredicted RBP3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 TRBV30A0A0K0K1B3 111 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 K7EQD1 137 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 DGAT2L7PQ6IED9 249 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 DAND5Q8N907 189 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 LINC01006Q8NI28 216 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 JMJD1CQ15652 2540 aa3.36□□□□□ -1.87
RUNDC3B-201ENST00000312373 C2CD3Q4AC94 2353 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 TRAV4A0A0B4J268 109 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 PLAC8L1A1L4L8 177 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 GAGE12JA6NER3 117 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 NDUFA1O15239 70 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 SCGB1A1P11684 91 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 RPL36AP83881 106 aaKnown RBP3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 GAGE4Q13068 117 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 GAGE5Q13069 117 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 RPL36ALQ969Q0 106 aaKnown RBP3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 NOP10Q9NPE3 64 aaKnown RBP3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 ACANP16112 2415 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 IGLV5-39A0A0G2JS06 123 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 TRBV10-1A0A0K0K1A3 114 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 TIMM17BO60830 172 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 LINC01620Q4KN68 170 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 TEX29Q8N6K0 151 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 C19orf73Q9NVV2 129 aa3.35□□□□□ -1.87
RUNDC3B-201ENST00000312373 PLA2G2AP14555 144 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 ATXN8Q156A1 80 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 FAM19A3Q7Z5A8 133 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 CSDC2Q9Y534 153 aaKnown RBP3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 ICOSQ9Y6W8 199 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 CUBNO60494 3623 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 LOC100131303A0A0U1RQF7 123 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 SMIM1B2RUZ4 78 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 M0QXV9 152 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 RPL35AP18077 110 aaKnown RBP3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 XGP55808 180 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 HERVK_113P63121 156 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 DAZ2Q13117 558 aaKnown RBP3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 DAZ4Q86SG3 579 aaKnown RBP3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 Q9H8V8 135 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 DAZ3Q9NR90 486 aaKnown RBP3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 CDC42SE2Q9NRR3 84 aa3.34□□□□□ -1.87
RUNDC3B-201ENST00000312373 SETXQ7Z333 2677 aaKnown RBP3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 NBPF19A0A087WUL8 3843 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 GAGE7O76087 117 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 IGLV1-51P01701 117 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 MT-ATP8P03928 68 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 GAGE12FP0CL80 117 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 GAGE12GP0CL81 117 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 GAGE12IP0CL82 117 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 IFITM1P13164 125 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 NTN5Q8WTR8 489 aaPredicted RBP3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 RNF183Q96D59 192 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 C16orf95Q9H693 158 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 YAE1D1Q9NRH1 226 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 MTORP42345 2549 aa3.34□□□□□ -1.88
RUNDC3B-201ENST00000312373 A0A0U1RRA0 63 aa3.33□□□□□ -1.88
RUNDC3B-201ENST00000312373 F5H768 121 aa3.33□□□□□ -1.88
RUNDC3B-201ENST00000312373 RNASE1P07998 156 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms