RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 SPTBN2O15020 2390 aa10.59□□□□□ -0.71
CHRNA7-201ENST00000306901 PSPHP1O15172 72 aa10.59□□□□□ -0.71
CHRNA7-201ENST00000306901 IGFL2Q6UWQ7 119 aa10.59□□□□□ -0.71
CHRNA7-201ENST00000306901 MALRD1Q5VYJ5 2156 aa10.59□□□□□ -0.71
CHRNA7-201ENST00000306901 PCNX2A6NKB5 2137 aa10.59□□□□□ -0.71
CHRNA7-201ENST00000306901 IGLV2-11P01706 119 aa10.59□□□□□ -0.71
CHRNA7-201ENST00000306901 PRR9Q5T870 116 aa10.59□□□□□ -0.71
CHRNA7-201ENST00000306901 ZNF106Q9H2Y7 1883 aaKnown RBP10.58□□□□□ -0.72
CHRNA7-201ENST00000306901 BBC3Q96PG8 261 aaPredicted RBP10.58□□□□□ -0.72
CHRNA7-201ENST00000306901 COL4A3Q01955 1670 aa10.58□□□□□ -0.72
CHRNA7-201ENST00000306901 RETNLBQ9BQ08 111 aa10.58□□□□□ -0.72
CHRNA7-201ENST00000306901 NOTCH3Q9UM47 2321 aa10.57□□□□□ -0.72
CHRNA7-201ENST00000306901 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
CHRNA7-201ENST00000306901 K7EQG2 157 aa10.57□□□□□ -0.72
CHRNA7-201ENST00000306901 LY6LH3BQJ8 138 aa10.57□□□□□ -0.72
CHRNA7-201ENST00000306901 CRIP3Q6Q6R5 217 aa10.57□□□□□ -0.72
CHRNA7-201ENST00000306901 SMIM26A0A096LP01 95 aa10.57□□□□□ -0.72
CHRNA7-201ENST00000306901 ODF3BA8MYP8 253 aa10.57□□□□□ -0.72
CHRNA7-201ENST00000306901 SHANK1Q9Y566 2161 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 CACNA1BQ00975 2339 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 PLCE1Q9P212 2302 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 TMEM89A2RUT3 159 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 UBE2D4Q9Y2X8 147 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 DEFB114Q30KQ6 69 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 Q6JHZ5 121 aa10.56□□□□□ -0.72
CHRNA7-201ENST00000306901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.55□□□□□ -0.72
CHRNA7-201ENST00000306901 ZGRF1Q86YA3 2104 aa10.55□□□□□ -0.72
CHRNA7-201ENST00000306901 SYCNQ0VAF6 134 aa10.54□□□□□ -0.72
CHRNA7-201ENST00000306901 C14orf177Q52M58 125 aa10.54□□□□□ -0.72
CHRNA7-201ENST00000306901 WFDC10AQ9H1F0 79 aa10.54□□□□□ -0.72
CHRNA7-201ENST00000306901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHRNA7-201ENST00000306901 GVINP1Q7Z2Y8 2422 aa10.54□□□□□ -0.72
CHRNA7-201ENST00000306901 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
CHRNA7-201ENST00000306901 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
CHRNA7-201ENST00000306901 IGLV2-18A0A075B6J9 118 aa10.53□□□□□ -0.72
CHRNA7-201ENST00000306901 A0A1W2PNU3 283 aaPredicted RBP10.53□□□□□ -0.72
CHRNA7-201ENST00000306901 KIF26AQ9ULI4 1882 aaPredicted RBP10.53□□□□□ -0.72
CHRNA7-201ENST00000306901 UBE2D1P51668 147 aa10.53□□□□□ -0.72
CHRNA7-201ENST00000306901 BEAN1Q3B7T3 259 aa10.53□□□□□ -0.72
CHRNA7-201ENST00000306901 A0A087WYN8 130 aa10.52□□□□□ -0.72
CHRNA7-201ENST00000306901 LYRM9A8MSI8 78 aa10.52□□□□□ -0.73
CHRNA7-201ENST00000306901 M0R2N4 97 aa10.52□□□□□ -0.73
CHRNA7-201ENST00000306901 LINC00959A0A1B0GUT2 108 aa10.51□□□□□ -0.73
CHRNA7-201ENST00000306901 M0R378 163 aa10.51□□□□□ -0.73
CHRNA7-201ENST00000306901 PRR3P79522 188 aaKnown RBP10.51□□□□□ -0.73
CHRNA7-201ENST00000306901 C18orf65Q6ZTR6 163 aa10.51□□□□□ -0.73
CHRNA7-201ENST00000306901 LINC00208Q96KT6 92 aa10.51□□□□□ -0.73
CHRNA7-201ENST00000306901 ZNF843Q8N446 348 aa10.5□□□□□ -0.73
CHRNA7-201ENST00000306901 KIR2DL5BQ8NHK3 375 aa10.5□□□□□ -0.73
CHRNA7-201ENST00000306901 PYGO1Q9Y3Y4 419 aa10.5□□□□□ -0.73
CHRNA7-201ENST00000306901 KIAA1549Q9HCM3 1950 aa10.5□□□□□ -0.73
CHRNA7-201ENST00000306901 ZNF73O43830 326 aaPredicted RBP10.5□□□□□ -0.73
CHRNA7-201ENST00000306901 ESRGQ1W209 222 aa10.5□□□□□ -0.73
CHRNA7-201ENST00000306901 TRAV7A0A075B6U4 112 aa10.49□□□□□ -0.73
CHRNA7-201ENST00000306901 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
CHRNA7-201ENST00000306901 C9orf116Q5BN46 136 aaPredicted RBP10.49□□□□□ -0.73
CHRNA7-201ENST00000306901 NUP210Q8TEM1 1887 aaPredicted RBP10.49□□□□□ -0.73
CHRNA7-201ENST00000306901 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
CHRNA7-201ENST00000306901 NOTCH4Q99466 2003 aa10.49□□□□□ -0.73
CHRNA7-201ENST00000306901 TRBV6-4A0A1B0GX49 114 aa10.48□□□□□ -0.73
CHRNA7-201ENST00000306901 PRYO14603 147 aa10.48□□□□□ -0.73
CHRNA7-201ENST00000306901 LINC00310P59036 64 aa10.48□□□□□ -0.73
CHRNA7-201ENST00000306901 NCOA6Q14686 2063 aaPredicted RBP10.48□□□□□ -0.73
CHRNA7-201ENST00000306901 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
CHRNA7-201ENST00000306901 CD164L2Q6UWJ8 174 aa10.48□□□□□ -0.73
CHRNA7-201ENST00000306901 LMO4P61968 165 aa10.47□□□□□ -0.73
CHRNA7-201ENST00000306901 TNFRSF13BO14836 293 aaPredicted RBP10.47□□□□□ -0.73
CHRNA7-201ENST00000306901 COX6A2Q02221 97 aa10.47□□□□□ -0.73
CHRNA7-201ENST00000306901 CACNA1GO43497 2377 aa10.47□□□□□ -0.73
CHRNA7-201ENST00000306901 URB1-AS1Q96HZ7 61 aa10.47□□□□□ -0.73
CHRNA7-201ENST00000306901 Q6YL49 198 aa10.46□□□□□ -0.73
CHRNA7-201ENST00000306901 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
CHRNA7-201ENST00000306901 PLAC8L1A1L4L8 177 aa10.46□□□□□ -0.73
CHRNA7-201ENST00000306901 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
CHRNA7-201ENST00000306901 Q6ZVQ6 151 aa10.46□□□□□ -0.73
CHRNA7-201ENST00000306901 TSPEAR-AS2P59090 65 aa10.46□□□□□ -0.73
CHRNA7-201ENST00000306901 DEFB116Q30KQ4 102 aa10.46□□□□□ -0.73
CHRNA7-201ENST00000306901 TANC1Q9C0D5 1861 aa10.46□□□□□ -0.74
CHRNA7-201ENST00000306901 DAZAP2Q15038 168 aaPredicted RBP10.46□□□□□ -0.74
CHRNA7-201ENST00000306901 MRPS36P82909 103 aaKnown RBP10.46□□□□□ -0.74
CHRNA7-201ENST00000306901 IGLV4-69A0A075B6H9 119 aa10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 TRBV7-6A0A0J9YX20 115 aa10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 X6R8D5 127 aa10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 SPTAN1Q13813 2472 aaKnown RBP10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 EDN2P20800 178 aa10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 LINC00574Q9H8X3 128 aa10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 CNOT1A5YKK6 2376 aaKnown RBP10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 ZNF580Q9UK33 172 aa10.45□□□□□ -0.74
CHRNA7-201ENST00000306901 SPINK1P00995 79 aa10.44□□□□□ -0.74
CHRNA7-201ENST00000306901 HILS1P60008 231 aa10.44□□□□□ -0.74
CHRNA7-201ENST00000306901 UBE2D3P61077 147 aa10.44□□□□□ -0.74
CHRNA7-201ENST00000306901 Q8N814 137 aa10.44□□□□□ -0.74
CHRNA7-201ENST00000306901 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
CHRNA7-201ENST00000306901 PCDH15Q96QU1 1955 aa10.43□□□□□ -0.74
CHRNA7-201ENST00000306901 ADAMTS9Q9P2N4 1935 aa10.43□□□□□ -0.74
CHRNA7-201ENST00000306901 CRYGAP11844 174 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms