RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 VCX2Q9H322 139 aa9.03□□□□□ -0.96
CCDC7-202ENST00000302316 TSTD3H0UI37 97 aa9.02□□□□□ -0.96
CCDC7-202ENST00000302316 PLNP26678 52 aa9.02□□□□□ -0.96
CCDC7-202ENST00000302316 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.96
CCDC7-202ENST00000302316 MRPL52Q86TS9 123 aaKnown RBP9.02□□□□□ -0.96
CCDC7-202ENST00000302316 CHCHD5Q9BSY4 110 aa9.02□□□□□ -0.96
CCDC7-202ENST00000302316 H7C423 109 aa9.02□□□□□ -0.97
CCDC7-202ENST00000302316 PKIAP61925 76 aa9.02□□□□□ -0.97
CCDC7-202ENST00000302316 GAGE6Q13070 117 aa9.02□□□□□ -0.97
CCDC7-202ENST00000302316 SH2D6Q7Z4S9 175 aa9.02□□□□□ -0.97
CCDC7-202ENST00000302316 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
CCDC7-202ENST00000302316 DNAH9Q9NYC9 4486 aa9.02□□□□□ -0.97
CCDC7-202ENST00000302316 H3BNG1 76 aa9.01□□□□□ -0.97
CCDC7-202ENST00000302316 DEFA6Q01524 100 aa9.01□□□□□ -0.97
CCDC7-202ENST00000302316 MRPS36P82909 103 aaKnown RBP9.01□□□□□ -0.97
CCDC7-202ENST00000302316 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
CCDC7-202ENST00000302316 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
CCDC7-202ENST00000302316 AMELXQ99217 191 aa9.01□□□□□ -0.97
CCDC7-202ENST00000302316 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
CCDC7-202ENST00000302316 IGLV4-69A0A075B6H9 119 aa9□□□□□ -0.97
CCDC7-202ENST00000302316 TRAV10A0A0B4J240 114 aa9□□□□□ -0.97
CCDC7-202ENST00000302316 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
CCDC7-202ENST00000302316 STPG4Q8N801 248 aa8.99□□□□□ -0.97
CCDC7-202ENST00000302316 ZNF25P17030 456 aaPredicted RBP8.99□□□□□ -0.97
CCDC7-202ENST00000302316 C21orf62-AS1Q17RA5 79 aa8.99□□□□□ -0.97
CCDC7-202ENST00000302316 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
CCDC7-202ENST00000302316 TCTAP57738 103 aa8.98□□□□□ -0.97
CCDC7-202ENST00000302316 ANKRD39Q53RE8 183 aa8.98□□□□□ -0.97
CCDC7-202ENST00000302316 MEGF8Q7Z7M0 2845 aa8.98□□□□□ -0.97
CCDC7-202ENST00000302316 TMEM262E9PQX1 116 aa8.98□□□□□ -0.97
CCDC7-202ENST00000302316 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
CCDC7-202ENST00000302316 CDC42SE2Q9NRR3 84 aa8.98□□□□□ -0.97
CCDC7-202ENST00000302316 NHLRC4P0CG21 123 aaPredicted RBP8.97□□□□□ -0.97
CCDC7-202ENST00000302316 COL7A1Q02388 2944 aa8.97□□□□□ -0.97
CCDC7-202ENST00000302316 A0A0J9YXV3 536 aa8.96□□□□□ -0.97
CCDC7-202ENST00000302316 IGLC3P0DOY3 106 aa8.96□□□□□ -0.97
CCDC7-202ENST00000302316 LELP1Q5T871 98 aa8.96□□□□□ -0.97
CCDC7-202ENST00000302316 NFE4Q86UQ8 179 aa8.96□□□□□ -0.97
CCDC7-202ENST00000302316 IGLV4-60A0A075B6I1 120 aa8.96□□□□□ -0.98
CCDC7-202ENST00000302316 C14orf144Q96I85 54 aa8.96□□□□□ -0.98
CCDC7-202ENST00000302316 UBE2D1P51668 147 aa8.95□□□□□ -0.98
CCDC7-202ENST00000302316 MPV17L2Q567V2 206 aa8.95□□□□□ -0.98
CCDC7-202ENST00000302316 TMEM170BQ5T4T1 132 aa8.95□□□□□ -0.98
CCDC7-202ENST00000302316 LYPD5Q6UWN5 251 aa8.95□□□□□ -0.98
CCDC7-202ENST00000302316 NMUP48645 174 aa8.95□□□□□ -0.98
CCDC7-202ENST00000302316 RBX1P62877 108 aa8.95□□□□□ -0.98
CCDC7-202ENST00000302316 SVIPQ8NHG7 77 aa8.95□□□□□ -0.98
CCDC7-202ENST00000302316 TIRAPP58753 221 aa8.94□□□□□ -0.98
CCDC7-202ENST00000302316 STAB2Q8WWQ8 2551 aa8.94□□□□□ -0.98
CCDC7-202ENST00000302316 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 A0A1B0GUV1 79 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 DDTP30046 118 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 MIEN1Q9BRT3 115 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 UQCR10Q9UDW1 63 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 IGKV2D-26A0A0A0MRZ7 120 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 ZNF22P17026 224 aaPredicted RBP8.93□□□□□ -0.98
CCDC7-202ENST00000302316 HERVK_113P61574 105 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 C15orf53Q8NAA6 179 aa8.93□□□□□ -0.98
CCDC7-202ENST00000302316 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
CCDC7-202ENST00000302316 GEMIN7Q9H840 131 aaKnown RBP8.92□□□□□ -0.98
CCDC7-202ENST00000302316 TRAV8-6A0A0B4J262 113 aa8.92□□□□□ -0.98
CCDC7-202ENST00000302316 COX8AP10176 69 aa8.92□□□□□ -0.98
CCDC7-202ENST00000302316 SLC25A34Q6PIV7 304 aa8.92□□□□□ -0.98
CCDC7-202ENST00000302316 TP73-AS1Q9UF72 201 aa8.92□□□□□ -0.98
CCDC7-202ENST00000302316 PRKDCP78527 4128 aaKnown RBP8.91□□□□□ -0.98
CCDC7-202ENST00000302316 IGLL5B9A064 214 aa8.91□□□□□ -0.98
CCDC7-202ENST00000302316 ESRGQ1W209 222 aa8.91□□□□□ -0.98
CCDC7-202ENST00000302316 Q8N3U1 123 aa8.91□□□□□ -0.98
CCDC7-202ENST00000302316 E9PLD3 99 aa8.9□□□□□ -0.98
CCDC7-202ENST00000302316 SEC11AP67812 179 aa8.9□□□□□ -0.98
CCDC7-202ENST00000302316 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
CCDC7-202ENST00000302316 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
CCDC7-202ENST00000302316 HERVK_113P63121 156 aa8.9□□□□□ -0.99
CCDC7-202ENST00000302316 FAM19A3Q7Z5A8 133 aa8.9□□□□□ -0.99
CCDC7-202ENST00000302316 PCP2Q8IVA1 136 aa8.9□□□□□ -0.99
CCDC7-202ENST00000302316 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
CCDC7-202ENST00000302316 ANGP03950 147 aaKnown RBP8.89□□□□□ -0.99
CCDC7-202ENST00000302316 CLPSL2Q6UWE3 100 aa8.89□□□□□ -0.99
CCDC7-202ENST00000302316 LINC00587B1AMM8 73 aa8.89□□□□□ -0.99
CCDC7-202ENST00000302316 HNRNPA3P51991 378 aaKnown RBP8.89□□□□□ -0.99
CCDC7-202ENST00000302316 COX6A2Q02221 97 aa8.89□□□□□ -0.99
CCDC7-202ENST00000302316 WFDC10BQ8IUB3 73 aa8.89□□□□□ -0.99
CCDC7-202ENST00000302316 LINC00269Q8N2A0 174 aa8.88□□□□□ -0.99
CCDC7-202ENST00000302316 TTTY13Q9BZ97 58 aa8.88□□□□□ -0.99
CCDC7-202ENST00000302316 CDKN2A-AS1Q9UH64 79 aa8.88□□□□□ -0.99
CCDC7-202ENST00000302316 IGHV3-64A0A075B6Q5 118 aa8.87□□□□□ -0.99
CCDC7-202ENST00000302316 IGLV5-45A0A087WSX0 123 aa8.87□□□□□ -0.99
CCDC7-202ENST00000302316 A6NJY4 79 aa8.87□□□□□ -0.99
CCDC7-202ENST00000302316 H3BRM9 83 aa8.87□□□□□ -0.99
CCDC7-202ENST00000302316 BOD1L2Q8IYS8 172 aa8.87□□□□□ -0.99
CCDC7-202ENST00000302316 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
CCDC7-202ENST00000302316 IGHV3-30P01768 117 aa8.86□□□□□ -0.99
CCDC7-202ENST00000302316 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
CCDC7-202ENST00000302316 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
CCDC7-202ENST00000302316 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
CCDC7-202ENST00000302316 IGHV3-30-5P0DP03 117 aa8.86□□□□□ -0.99
CCDC7-202ENST00000302316 DLEU1O43261 78 aa8.86□□□□□ -0.99
CCDC7-202ENST00000302316 REG3AQ06141 175 aa8.86□□□□□ -0.99
CCDC7-202ENST00000302316 SS18Q15532 418 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms