RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 JOSD1Q15040 202 aaPredicted RBP3.95□□□□□ -1.78
ITGB1-201ENST00000302278 COL5A1-AS1Q5SY13 56 aa3.95□□□□□ -1.78
ITGB1-201ENST00000302278 DLEU1O43261 78 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 TRGC1P0CF51 173 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 SUMO1P63165 101 aaKnown RBP3.94□□□□□ -1.78
ITGB1-201ENST00000302278 STPG4Q8N801 248 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 PRSS3P2Q8NHM4 247 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 DERL1Q9BUN8 251 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 FAM231BA6NCW3 169 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 COX6A2Q02221 97 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 IGLV1-50A0A075B6I6 118 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 ZNF727A8MUV8 499 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 M0QY20 66 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BKO60814 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BJP06899 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BOP23527 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BBP33778 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BDP58876 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BCP62807 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 ADIRFQ15847 76 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST2H2BEQ16778 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 MAJINQ3KP22 176 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST3H2BBQ8N257 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BHQ93079 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BNQ99877 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BMQ99879 126 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 CTDSP1Q9GZU7 261 aa3.94□□□□□ -1.78
ITGB1-201ENST00000302278 IGLV4-60A0A075B6I1 120 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 H7C423 109 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 VAMP8Q9BV40 100 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 GAGE6Q13070 117 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 CST9LP1Q5W188 147 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 MLST8Q9BVC4 326 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 M0R381 172 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 ATP6V0CP27449 155 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 FOXI1Q12951 378 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 GTSF1Q8WW33 167 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 GNG13Q9P2W3 67 aa3.93□□□□□ -1.78
ITGB1-201ENST00000302278 H7C1H1 209 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 ZNF56Q15929 161 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 ZNF726P1Q15940 193 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 AP1S3Q96PC3 154 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 TGIF2-C20orf24A0A0A6YYL0 155 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 VAMP3Q15836 100 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 CLPSL2Q6UWE3 100 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 OR10AG1Q8NH19 301 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 HIST1H2BLQ99880 126 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 SMIM7Q9BQ49 75 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 TMEM243Q9BU79 118 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 ACTR3CQ9C0K3 210 aaPredicted RBP3.92□□□□□ -1.78
ITGB1-201ENST00000302278 CYTL1Q9NRR1 136 aa3.92□□□□□ -1.78
ITGB1-201ENST00000302278 MRPL52Q86TS9 123 aaKnown RBP3.91□□□□□ -1.78
ITGB1-201ENST00000302278 BAGE3Q86Y29 109 aa3.91□□□□□ -1.78
ITGB1-201ENST00000302278 BAGE2Q86Y30 109 aa3.91□□□□□ -1.78
ITGB1-201ENST00000302278 CTXND1A0A1B0GTU2 59 aa3.91□□□□□ -1.78
ITGB1-201ENST00000302278 GAGE12HA6NDE8 117 aa3.91□□□□□ -1.78
ITGB1-201ENST00000302278 MAP1LC3B2A6NCE7 125 aa3.9□□□□□ -1.78
ITGB1-201ENST00000302278 HMGB3O15347 200 aaKnown RBP3.9□□□□□ -1.78
ITGB1-201ENST00000302278 NCR2O95944 276 aa3.9□□□□□ -1.78
ITGB1-201ENST00000302278 IGLC6P0CF74 106 aa3.9□□□□□ -1.78
ITGB1-201ENST00000302278 MAP1LC3BQ9GZQ8 125 aa3.9□□□□□ -1.78
ITGB1-201ENST00000302278 H0Y9J4 135 aa3.9□□□□□ -1.79
ITGB1-201ENST00000302278 K7ERU9 68 aa3.9□□□□□ -1.79
ITGB1-201ENST00000302278 TMEM241Q24JQ0 296 aa3.9□□□□□ -1.79
ITGB1-201ENST00000302278 ANKRD39Q53RE8 183 aa3.9□□□□□ -1.79
ITGB1-201ENST00000302278 C9JQL5 133 aa3.9□□□□□ -1.79
ITGB1-201ENST00000302278 SNHG12Q9BXW3 62 aa3.9□□□□□ -1.79
ITGB1-201ENST00000302278 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 PRSS47A8MTI9 375 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 SUMO4Q6EEV6 95 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 OR2D3Q8NGH3 330 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 DPH3Q96FX2 82 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 TRAPPC1Q9Y5R8 145 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 TRAV26-2A0A0B4J265 109 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 HSBP1L1C9JCN9 74 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 SRP19P09132 144 aaKnown RBP3.89□□□□□ -1.79
ITGB1-201ENST00000302278 DIRC1Q969H9 104 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 TRBV24-1A0A075B6N3 115 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 CACNG7P62955 275 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 RASL11AQ6T310 242 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 FER1L6-AS1Q8NA97 138 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-201ENST00000302278 BORCS7Q96B45 105 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 CARD19Q96LW7 228 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 MIEN1Q9BRT3 115 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 TMEM242Q9NWH2 141 aa3.89□□□□□ -1.79
ITGB1-201ENST00000302278 LOC107984640A0A0U1RRK4 108 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 IGLV7-43P04211 117 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 Q6ZN92 141 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 OR5A1Q8NGJ0 315 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 CNFNQ9BYD5 112 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 IGKV2-24A0A0C4DH68 120 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 F8WDY8 70 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 NPSP0C0P6 89 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms