RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 EIF4EBP1Q13541 118 aaPredicted RBP10.06□□□□□ -0.8
CHRFAM7A-201ENST00000299847 C3orf22Q8N5N4 141 aa10.06□□□□□ -0.8
CHRFAM7A-201ENST00000299847 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
CHRFAM7A-201ENST00000299847 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
CHRFAM7A-201ENST00000299847 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
CHRFAM7A-201ENST00000299847 LY6LH3BQJ8 138 aa10.04□□□□□ -0.8
CHRFAM7A-201ENST00000299847 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
CHRFAM7A-201ENST00000299847 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
CHRFAM7A-201ENST00000299847 ODF3Q96PU9 254 aa10.04□□□□□ -0.8
CHRFAM7A-201ENST00000299847 CCKP06307 115 aa10.04□□□□□ -0.8
CHRFAM7A-201ENST00000299847 MRPS12O15235 138 aaKnown RBP10.04□□□□□ -0.8
CHRFAM7A-201ENST00000299847 ZNF702PQ9H963 129 aa10.04□□□□□ -0.8
CHRFAM7A-201ENST00000299847 FREM1Q5H8C1 2179 aa10.03□□□□□ -0.8
CHRFAM7A-201ENST00000299847 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
CHRFAM7A-201ENST00000299847 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
CHRFAM7A-201ENST00000299847 TNCP24821 2201 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 LY6G6CO95867 125 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 SMR3AQ99954 134 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 CACNA1HO95180 2353 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 TSHBP01222 138 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 LINC00574Q9H8X3 128 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 SYCNQ0VAF6 134 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 LRRC75A-AS1Q8N1F1 130 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 C9orf85Q96MD7 179 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 PDE6GP18545 87 aa10.02□□□□□ -0.81
CHRFAM7A-201ENST00000299847 FAM236DA0A1B0GTK5 79 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 FAM236CP0DP71 79 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 SMIM9A6NGZ8 99 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 NANOS2P60321 138 aaKnown RBP10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 IGLV2-11P01706 119 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 POM121L12Q8N7R1 296 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 FAM30AQ9NZY2 134 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 C11orf21Q9P2W6 132 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 RETNQ9HD89 108 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 IBA57-AS1B1ANH7 110 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 C11orf71Q6IPW1 123 aa10.01□□□□□ -0.81
CHRFAM7A-201ENST00000299847 IL17DQ8TAD2 202 aa10□□□□□ -0.81
CHRFAM7A-201ENST00000299847 H7C423 109 aa10□□□□□ -0.81
CHRFAM7A-201ENST00000299847 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
CHRFAM7A-201ENST00000299847 RBX1P62877 108 aa10□□□□□ -0.81
CHRFAM7A-201ENST00000299847 KPRPQ5T749 579 aaPredicted RBP10□□□□□ -0.81
CHRFAM7A-201ENST00000299847 UBE2D1P51668 147 aa10□□□□□ -0.81
CHRFAM7A-201ENST00000299847 PCDH15Q96QU1 1955 aa9.99□□□□□ -0.81
CHRFAM7A-201ENST00000299847 MIFP14174 115 aa9.99□□□□□ -0.81
CHRFAM7A-201ENST00000299847 U3KQK5 164 aa9.99□□□□□ -0.81
CHRFAM7A-201ENST00000299847 PCNX3Q9H6A9 2034 aa9.99□□□□□ -0.81
CHRFAM7A-201ENST00000299847 COL4A4P53420 1690 aaPredicted RBP9.98□□□□□ -0.81
CHRFAM7A-201ENST00000299847 NDUFA7O95182 113 aa9.98□□□□□ -0.81
CHRFAM7A-201ENST00000299847 CDSNQ15517 529 aa9.98□□□□□ -0.81
CHRFAM7A-201ENST00000299847 ZFHX2Q9C0A1 2572 aaPredicted RBP9.98□□□□□ -0.81
CHRFAM7A-201ENST00000299847 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
CHRFAM7A-201ENST00000299847 Q6ZQY7 126 aa9.98□□□□□ -0.81
CHRFAM7A-201ENST00000299847 SMIM11BQ8TCY0 68 aa9.98□□□□□ -0.81
CHRFAM7A-201ENST00000299847 NRACQ8N912 160 aa9.97□□□□□ -0.81
CHRFAM7A-201ENST00000299847 SRCAPQ6ZRS2 3230 aa9.97□□□□□ -0.81
CHRFAM7A-201ENST00000299847 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
CHRFAM7A-201ENST00000299847 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
CHRFAM7A-201ENST00000299847 LINC01006Q8NI28 216 aa9.96□□□□□ -0.81
CHRFAM7A-201ENST00000299847 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.81
CHRFAM7A-201ENST00000299847 C7orf33Q8WU49 177 aa9.96□□□□□ -0.81
CHRFAM7A-201ENST00000299847 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
CHRFAM7A-201ENST00000299847 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.82
CHRFAM7A-201ENST00000299847 RETNLBQ9BQ08 111 aa9.95□□□□□ -0.82
CHRFAM7A-201ENST00000299847 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
CHRFAM7A-201ENST00000299847 UQCRQO14949 82 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 LTBP2Q14767 1821 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 SHISA2Q6UWI4 295 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 KIR2DL5BQ8NHK3 375 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 MED12LQ86YW9 2145 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 C9orf116Q5BN46 136 aaPredicted RBP9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 UBE2D3P61077 147 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 EBI3Q14213 229 aa9.94□□□□□ -0.82
CHRFAM7A-201ENST00000299847 PSMG3-AS1Q96PY0 264 aa9.93□□□□□ -0.82
CHRFAM7A-201ENST00000299847 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
CHRFAM7A-201ENST00000299847 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
CHRFAM7A-201ENST00000299847 C2orf91Q6ZV80 131 aa9.92□□□□□ -0.82
CHRFAM7A-201ENST00000299847 TRBV27A0A0K0K1C4 114 aa9.92□□□□□ -0.82
CHRFAM7A-201ENST00000299847 NDUFC2-KCTD14E9PQ53 114 aa9.92□□□□□ -0.82
CHRFAM7A-201ENST00000299847 CCDC179H3BU77 68 aa9.91□□□□□ -0.82
CHRFAM7A-201ENST00000299847 M0R378 163 aa9.91□□□□□ -0.82
CHRFAM7A-201ENST00000299847 TECTAO75443 2155 aa9.91□□□□□ -0.82
CHRFAM7A-201ENST00000299847 CELA1Q9UNI1 258 aa9.91□□□□□ -0.82
CHRFAM7A-201ENST00000299847 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
CHRFAM7A-201ENST00000299847 YPEL4Q96NS1 127 aa9.91□□□□□ -0.82
CHRFAM7A-201ENST00000299847 AVPP01185 164 aa9.9□□□□□ -0.82
CHRFAM7A-201ENST00000299847 BRI3O95415 125 aa9.89□□□□□ -0.83
CHRFAM7A-201ENST00000299847 LELP1Q5T871 98 aa9.89□□□□□ -0.83
CHRFAM7A-201ENST00000299847 CEP192Q8TEP8 1941 aa9.89□□□□□ -0.83
CHRFAM7A-201ENST00000299847 Q8N6K4 173 aa9.89□□□□□ -0.83
CHRFAM7A-201ENST00000299847 DSCAMO60469 2012 aa9.88□□□□□ -0.83
CHRFAM7A-201ENST00000299847 COX6A2Q02221 97 aa9.88□□□□□ -0.83
CHRFAM7A-201ENST00000299847 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
CHRFAM7A-201ENST00000299847 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
CHRFAM7A-201ENST00000299847 CYSRT1A8MQ03 144 aa9.87□□□□□ -0.83
CHRFAM7A-201ENST00000299847 FAM240AA0A1B0GVK7 77 aa9.87□□□□□ -0.83
CHRFAM7A-201ENST00000299847 KRTAP10-9P60411 292 aa9.87□□□□□ -0.83
CHRFAM7A-201ENST00000299847 ZNF73O43830 326 aaPredicted RBP9.87□□□□□ -0.83
CHRFAM7A-201ENST00000299847 KLLNB2CW77 178 aa9.86□□□□□ -0.83
CHRFAM7A-201ENST00000299847 UBE2D2P62837 147 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms