RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GAGE13Q4V321 117 aa14.53□□□□□ -0.08
SMCO4-201ENST00000298966 IFI27L1Q96BM0 104 aa14.53□□□□□ -0.08
SMCO4-201ENST00000298966 GTSF1LQ9H1H1 148 aa14.53□□□□□ -0.08
SMCO4-201ENST00000298966 TRAV26-1A0A087WT03 109 aa14.52□□□□□ -0.09
SMCO4-201ENST00000298966 F5H768 121 aa14.52□□□□□ -0.09
SMCO4-201ENST00000298966 SMAGPQ0VAQ4 97 aa14.52□□□□□ -0.09
SMCO4-201ENST00000298966 C2orf66Q6UXQ4 117 aa14.51□□□□□ -0.09
SMCO4-201ENST00000298966 Q9UF83 564 aa14.51□□□□□ -0.09
SMCO4-201ENST00000298966 DMBT1Q9UGM3 2413 aaPredicted RBP14.51□□□□□ -0.09
SMCO4-201ENST00000298966 NPSP0C0P6 89 aa14.5□□□□□ -0.09
SMCO4-201ENST00000298966 GYPEP15421 78 aa14.5□□□□□ -0.09
SMCO4-201ENST00000298966 C6orf223Q8N319 242 aa14.5□□□□□ -0.09
SMCO4-201ENST00000298966 C20orf203Q8NBC4 194 aa14.5□□□□□ -0.09
SMCO4-201ENST00000298966 MRPL23Q16540 153 aaKnown RBP14.49□□□□□ -0.09
SMCO4-201ENST00000298966 LINC01545Q5VT33 79 aa14.49□□□□□ -0.09
SMCO4-201ENST00000298966 CDPF1Q6NVV7 123 aa14.49□□□□□ -0.09
SMCO4-201ENST00000298966 TEX43Q6ZNM6 134 aa14.49□□□□□ -0.09
SMCO4-201ENST00000298966 S100A12P80511 92 aa14.48□□□□□ -0.09
SMCO4-201ENST00000298966 ERASQ7Z444 233 aa14.48□□□□□ -0.09
SMCO4-201ENST00000298966 C15orf53Q8NAA6 179 aa14.48□□□□□ -0.09
SMCO4-201ENST00000298966 TMEM141Q96I45 108 aa14.48□□□□□ -0.09
SMCO4-201ENST00000298966 VSIG2Q96IQ7 327 aa14.48□□□□□ -0.09
SMCO4-201ENST00000298966 SCGB3A1Q96QR1 104 aa14.48□□□□□ -0.09
SMCO4-201ENST00000298966 TIMM17AQ99595 171 aa14.48□□□□□ -0.09
SMCO4-201ENST00000298966 NBDYA0A0U1RRE5 68 aa14.47□□□□□ -0.09
SMCO4-201ENST00000298966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-201ENST00000298966 H7C423 109 aa14.47□□□□□ -0.09
SMCO4-201ENST00000298966 ATP6V0E2Q8NHE4 81 aa14.47□□□□□ -0.09
SMCO4-201ENST00000298966 ICOSQ9Y6W8 199 aa14.47□□□□□ -0.09
SMCO4-201ENST00000298966 LOC100131303A0A0U1RQF7 123 aa14.46□□□□□ -0.09
SMCO4-201ENST00000298966 PYGO1Q9Y3Y4 419 aa14.46□□□□□ -0.09
SMCO4-201ENST00000298966 TRBV25-1A0A075B6N4 114 aa14.45□□□□□ -0.1
SMCO4-201ENST00000298966 PAPPA-AS1Q5QFB9 102 aa14.45□□□□□ -0.1
SMCO4-201ENST00000298966 CHCHD7Q9BUK0 85 aa14.45□□□□□ -0.1
SMCO4-201ENST00000298966 IGHV3-38A0A0C4DH36 116 aa14.44□□□□□ -0.1
SMCO4-201ENST00000298966 TIMM21Q9BVV7 248 aa14.44□□□□□ -0.1
SMCO4-201ENST00000298966 SPANXA1Q9NS26 97 aa14.44□□□□□ -0.1
SMCO4-201ENST00000298966 IGIPA6NJ69 53 aa14.43□□□□□ -0.1
SMCO4-201ENST00000298966 Q6ZN92 141 aa14.43□□□□□ -0.1
SMCO4-201ENST00000298966 TRBV6-8A0A0A6YYG3 113 aa14.42□□□□□ -0.1
SMCO4-201ENST00000298966 TRAV12-1A0A0B4J245 112 aa14.42□□□□□ -0.1
SMCO4-201ENST00000298966 A0A0J9YY99 117 aa14.42□□□□□ -0.1
SMCO4-201ENST00000298966 PRSS1P07477 247 aa14.42□□□□□ -0.1
SMCO4-201ENST00000298966 RPL39P62891 51 aaKnown RBP14.42□□□□□ -0.1
SMCO4-201ENST00000298966 TMEM243Q9BU79 118 aa14.42□□□□□ -0.1
SMCO4-201ENST00000298966 H0Y8G0 127 aa14.41□□□□□ -0.1
SMCO4-201ENST00000298966 TIRAPP58753 221 aa14.41□□□□□ -0.1
SMCO4-201ENST00000298966 DEFB104AQ8WTQ1 72 aa14.41□□□□□ -0.1
SMCO4-201ENST00000298966 VAMP8Q9BV40 100 aa14.41□□□□□ -0.1
SMCO4-201ENST00000298966 PKIAP61925 76 aa14.4□□□□□ -0.1
SMCO4-201ENST00000298966 ODF1Q14990 250 aa14.4□□□□□ -0.1
SMCO4-201ENST00000298966 NTM-AS1Q6ZSK4 140 aa14.4□□□□□ -0.1
SMCO4-201ENST00000298966 MRPL52Q86TS9 123 aaKnown RBP14.4□□□□□ -0.1
SMCO4-201ENST00000298966 CSDC2Q9Y534 153 aaKnown RBP14.4□□□□□ -0.1
SMCO4-201ENST00000298966 UBE2L6O14933 153 aa14.39□□□□□ -0.11
SMCO4-201ENST00000298966 ZNF25P17030 456 aaPredicted RBP14.39□□□□□ -0.11
SMCO4-201ENST00000298966 BAALCQ8WXS3 180 aa14.39□□□□□ -0.11
SMCO4-201ENST00000298966 TRAV9-2A0A087WT02 112 aa14.38□□□□□ -0.11
SMCO4-201ENST00000298966 A0A087WX48 190 aa14.38□□□□□ -0.11
SMCO4-201ENST00000298966 EPM2AB3EWF7 344 aa14.38□□□□□ -0.11
SMCO4-201ENST00000298966 UBE2D4Q9Y2X8 147 aa14.38□□□□□ -0.11
SMCO4-201ENST00000298966 A0A096LPF7 62 aa14.37□□□□□ -0.11
SMCO4-201ENST00000298966 CCL18P55774 89 aa14.37□□□□□ -0.11
SMCO4-201ENST00000298966 MRPS36P82909 103 aaKnown RBP14.37□□□□□ -0.11
SMCO4-201ENST00000298966 ZNF664Q8N3J9 261 aa14.36□□□□□ -0.11
SMCO4-201ENST00000298966 PMVKQ15126 192 aa14.35□□□□□ -0.11
SMCO4-201ENST00000298966 DGAT2L7PQ6IED9 249 aa14.35□□□□□ -0.11
SMCO4-201ENST00000298966 ATOH7Q8N100 152 aa14.35□□□□□ -0.11
SMCO4-201ENST00000298966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.34□□□□□ -0.11
SMCO4-201ENST00000298966 IGKV2-29A2NJV5 120 aaPredicted RBP14.34□□□□□ -0.11
SMCO4-201ENST00000298966 DPM2O94777 84 aa14.34□□□□□ -0.11
SMCO4-201ENST00000298966 LELP1Q5T871 98 aa14.34□□□□□ -0.11
SMCO4-201ENST00000298966 TMEM101Q96IK0 257 aa14.34□□□□□ -0.11
SMCO4-201ENST00000298966 PMCHL2Q9BQD1 86 aa14.34□□□□□ -0.11
SMCO4-201ENST00000298966 IGLV4-3A0A075B6K6 122 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 F8VRH5 84 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 TSTD3H0UI37 97 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 INAFM2P0DMQ5 153 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 FGF6P10767 208 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 PLNP26678 52 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 AMMECR1LQ6DCA0 310 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 CHCHD5Q9BSY4 110 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 VCX2Q9H322 139 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 PAM16Q9Y3D7 125 aa14.33□□□□□ -0.12
SMCO4-201ENST00000298966 HSBP1L1C9JCN9 74 aa14.32□□□□□ -0.12
SMCO4-201ENST00000298966 SPATA45Q537H7 98 aa14.32□□□□□ -0.12
SMCO4-201ENST00000298966 CST9LQ9H4G1 147 aa14.32□□□□□ -0.12
SMCO4-201ENST00000298966 MRPL35Q9NZE8 188 aaKnown RBP14.32□□□□□ -0.12
SMCO4-201ENST00000298966 CHTOPQ9Y3Y2 248 aaKnown RBP14.32□□□□□ -0.12
SMCO4-201ENST00000298966 LINC00588Q9Y4M8 146 aa14.32□□□□□ -0.12
SMCO4-201ENST00000298966 IGKCP01834 107 aa14.31□□□□□ -0.12
SMCO4-201ENST00000298966 KRTAP10-2P60368 255 aa14.31□□□□□ -0.12
SMCO4-201ENST00000298966 OR5A1Q8NGJ0 315 aa14.31□□□□□ -0.12
SMCO4-201ENST00000298966 AMELXQ99217 191 aa14.31□□□□□ -0.12
SMCO4-201ENST00000298966 A0A1B0GUV1 79 aa14.3□□□□□ -0.12
SMCO4-201ENST00000298966 TTC32Q5I0X7 151 aa14.3□□□□□ -0.12
SMCO4-201ENST00000298966 C2orf88Q9BSF0 95 aa14.3□□□□□ -0.12
SMCO4-201ENST00000298966 LYPD5Q6UWN5 251 aa14.29□□□□□ -0.12
SMCO4-201ENST00000298966 FAM104AQ969W3 186 aa14.29□□□□□ -0.12
SMCO4-201ENST00000298966 TRAV8-6A0A0B4J262 113 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms