RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 AJUBAQ96IF1 538 aa8.92□□□□□ -0.98
SHROOM3-201ENST00000296043 TRBV6-1A0A0K0K1D8 114 aa8.92□□□□□ -0.98
SHROOM3-201ENST00000296043 DNAJC9-AS1A6NH13 148 aa8.92□□□□□ -0.98
SHROOM3-201ENST00000296043 TRBV10-1A0A0K0K1A3 114 aa8.92□□□□□ -0.98
SHROOM3-201ENST00000296043 ZNF80P51504 273 aaPredicted RBP8.92□□□□□ -0.98
SHROOM3-201ENST00000296043 Q6ZS46 218 aa8.91□□□□□ -0.98
SHROOM3-201ENST00000296043 A0A096LNI7 61 aa8.91□□□□□ -0.98
SHROOM3-201ENST00000296043 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-201ENST00000296043 Q6ZS92 163 aa8.9□□□□□ -0.98
SHROOM3-201ENST00000296043 PRORYQ9H606 182 aa8.9□□□□□ -0.98
SHROOM3-201ENST00000296043 CRYGAP11844 174 aa8.9□□□□□ -0.98
SHROOM3-201ENST00000296043 PRYO14603 147 aa8.9□□□□□ -0.99
SHROOM3-201ENST00000296043 Q8N9L7 120 aa8.9□□□□□ -0.99
SHROOM3-201ENST00000296043 SPRNQ5BIV9 151 aa8.9□□□□□ -0.99
SHROOM3-201ENST00000296043 TRBV7-6A0A0J9YX20 115 aa8.9□□□□□ -0.99
SHROOM3-201ENST00000296043 C9orf85Q96MD7 179 aa8.9□□□□□ -0.99
SHROOM3-201ENST00000296043 PIEZO1Q92508 2521 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 C11orf53Q8IXP5 236 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 COL4A6Q14031 1691 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 MED14OSP0DP75 135 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 IGLV11-55A0A075B6I3 123 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 MSMBP08118 114 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 ZNF883P0CG24 379 aa8.89□□□□□ -0.99
SHROOM3-201ENST00000296043 DEFB4AO15263 64 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 LY6DQ14210 128 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 HHLA3Q9XRX5 114 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 KLK12Q9UKR0 248 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 MTORP42345 2549 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 RNF185Q96GF1 192 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 JMJD1CQ15652 2540 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 ZFAND2AQ8N6M9 145 aa8.88□□□□□ -0.99
SHROOM3-201ENST00000296043 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
SHROOM3-201ENST00000296043 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
SHROOM3-201ENST00000296043 IGHV7-81A0A0B4J1V7 117 aa8.87□□□□□ -0.99
SHROOM3-201ENST00000296043 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 LINC00310P59036 64 aa8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 USP9XQ93008 2570 aaPredicted RBP8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 XAGE1AQ9HD64 81 aa8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 E7EUB6 86 aa8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 MYCNOSP40205 109 aa8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 KAAG1Q9UBP8 84 aa8.86□□□□□ -0.99
SHROOM3-201ENST00000296043 A0A087WZ39 114 aa8.85□□□□□ -0.99
SHROOM3-201ENST00000296043 C17orf82Q86X59 251 aaPredicted RBP8.85□□□□□ -0.99
SHROOM3-201ENST00000296043 CDIP1Q9H305 208 aa8.85□□□□□ -0.99
SHROOM3-201ENST00000296043 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
SHROOM3-201ENST00000296043 C6orf99Q4VX62 202 aa8.85□□□□□ -0.99
SHROOM3-201ENST00000296043 ODF3L1Q8IXM7 274 aa8.85□□□□□ -0.99
SHROOM3-201ENST00000296043 KIR2DL5BQ8NHK3 375 aa8.84□□□□□ -0.99
SHROOM3-201ENST00000296043 H3BUA1 57 aa8.84□□□□□ -0.99
SHROOM3-201ENST00000296043 SMIM11BQ8TCY0 68 aa8.84□□□□□ -0.99
SHROOM3-201ENST00000296043 Q8N9W7 124 aa8.84□□□□□ -0.99
SHROOM3-201ENST00000296043 Q6ZQY7 126 aa8.84□□□□□ -0.99
SHROOM3-201ENST00000296043 SP5Q6BEB4 398 aaPredicted RBP8.84□□□□□ -1
SHROOM3-201ENST00000296043 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
SHROOM3-201ENST00000296043 PYGO1Q9Y3Y4 419 aa8.83□□□□□ -1
SHROOM3-201ENST00000296043 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
SHROOM3-201ENST00000296043 IGF1P05019 195 aa8.83□□□□□ -1
SHROOM3-201ENST00000296043 CRYGDP07320 174 aa8.83□□□□□ -1
SHROOM3-201ENST00000296043 NAV2Q8IVL1 2488 aa8.83□□□□□ -1
SHROOM3-201ENST00000296043 HILS1P60008 231 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 LINC00269Q8N2A0 174 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 CTSZQ9UBR2 303 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 F8W735 103 aaPredicted RBP8.82□□□□□ -1
SHROOM3-201ENST00000296043 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 ZMAT4Q9H898 229 aa8.82□□□□□ -1
SHROOM3-201ENST00000296043 GAS8-AS1O95177 125 aa8.81□□□□□ -1
SHROOM3-201ENST00000296043 NRACQ8N912 160 aa8.81□□□□□ -1
SHROOM3-201ENST00000296043 ZNF73O43830 326 aaPredicted RBP8.81□□□□□ -1
SHROOM3-201ENST00000296043 CCL24O00175 119 aa8.81□□□□□ -1
SHROOM3-201ENST00000296043 CRIP1P50238 77 aa8.81□□□□□ -1
SHROOM3-201ENST00000296043 CHCHD10Q8WYQ3 142 aaPredicted RBP8.8□□□□□ -1
SHROOM3-201ENST00000296043 USP24Q9UPU5 2620 aa8.8□□□□□ -1
SHROOM3-201ENST00000296043 Q6ZSV7 163 aa8.8□□□□□ -1
SHROOM3-201ENST00000296043 P0C879 139 aa8.79□□□□□ -1
SHROOM3-201ENST00000296043 IGLV1-44P01699 117 aa8.79□□□□□ -1
SHROOM3-201ENST00000296043 LINC00208Q96KT6 92 aa8.79□□□□□ -1
SHROOM3-201ENST00000296043 ESRGQ1W209 222 aa8.79□□□□□ -1
SHROOM3-201ENST00000296043 ZNF843Q8N446 348 aa8.79□□□□□ -1
SHROOM3-201ENST00000296043 Q8N6K4 173 aa8.79□□□□□ -1
SHROOM3-201ENST00000296043 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 UNQ9165/PRO28630Q6UXU0 137 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 KRTAP27-1Q3LI81 207 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 PLA2G2AP14555 144 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 REG3AQ06141 175 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 A0A087WYN8 130 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 SPART-AS1P0CW21 52 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 Q9UF83 564 aa8.78□□□□□ -1
SHROOM3-201ENST00000296043 UBE2D3P61077 147 aa8.77□□□□□ -1.01
SHROOM3-201ENST00000296043 UBE2D2P62837 147 aa8.77□□□□□ -1.01
SHROOM3-201ENST00000296043 PCSK5Q92824 1860 aa8.77□□□□□ -1.01
SHROOM3-201ENST00000296043 M0QY20 66 aa8.77□□□□□ -1.01
SHROOM3-201ENST00000296043 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
SHROOM3-201ENST00000296043 TSHBP01222 138 aa8.77□□□□□ -1.01
SHROOM3-201ENST00000296043 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms