RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 MSMBP08118 114 aa9.8□□□□□ -0.84
KCNIP3-201ENST00000295225 VPREB1P12018 145 aa9.8□□□□□ -0.84
KCNIP3-201ENST00000295225 NPC2P61916 151 aa9.8□□□□□ -0.84
KCNIP3-201ENST00000295225 MRPL55Q7Z7F7 128 aaKnown RBP9.79□□□□□ -0.84
KCNIP3-201ENST00000295225 BRK1Q8WUW1 75 aa9.79□□□□□ -0.84
KCNIP3-201ENST00000295225 PSMB8P28062 276 aa9.78□□□□□ -0.84
KCNIP3-201ENST00000295225 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
KCNIP3-201ENST00000295225 SETXQ7Z333 2677 aaKnown RBP9.78□□□□□ -0.84
KCNIP3-201ENST00000295225 A8MWV9 139 aa9.78□□□□□ -0.84
KCNIP3-201ENST00000295225 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
KCNIP3-201ENST00000295225 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
KCNIP3-201ENST00000295225 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
KCNIP3-201ENST00000295225 RBMY1A1P0DJD3 496 aaKnown RBP9.77□□□□□ -0.84
KCNIP3-201ENST00000295225 RBMY1CP0DJD4 496 aa9.77□□□□□ -0.84
KCNIP3-201ENST00000295225 RBMY1FQ15415 496 aaKnown RBP9.77□□□□□ -0.84
KCNIP3-201ENST00000295225 ZNF876PQ49A33 203 aa9.77□□□□□ -0.84
KCNIP3-201ENST00000295225 APCP25054 2843 aa9.77□□□□□ -0.85
KCNIP3-201ENST00000295225 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
KCNIP3-201ENST00000295225 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.85
KCNIP3-201ENST00000295225 USMG5Q96IX5 58 aa9.77□□□□□ -0.85
KCNIP3-201ENST00000295225 IGHV4OR15-8A0A075B7B6 117 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 A0A087WW49 117 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 IGHV3-38A0A0C4DH36 116 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 KLLNB2CW77 178 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 IGLV1-40P01703 118 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 IGHV3-16A0A0C4DH30 117 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 KLK9Q2XQG4 91 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 ODF3Q96PU9 254 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 FLNAP21333 2647 aaKnown RBP9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 A0A0J9YXV3 536 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 COX6B1P14854 86 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 POLR2KP53803 58 aaKnown RBP9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
KCNIP3-201ENST00000295225 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
KCNIP3-201ENST00000295225 SLURP1P55000 103 aa9.75□□□□□ -0.85
KCNIP3-201ENST00000295225 LENEPQ9Y5L5 61 aa9.75□□□□□ -0.85
KCNIP3-201ENST00000295225 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
KCNIP3-201ENST00000295225 A0A0J9YY99 117 aa9.74□□□□□ -0.85
KCNIP3-201ENST00000295225 Q6ZSV7 163 aa9.74□□□□□ -0.85
KCNIP3-201ENST00000295225 ITPR3Q14573 2671 aa9.74□□□□□ -0.85
KCNIP3-201ENST00000295225 TRAV8-3A0A0A6YYJ7 113 aa9.74□□□□□ -0.85
KCNIP3-201ENST00000295225 IGHV3OR16-12A0A075B7B8 117 aa9.73□□□□□ -0.85
KCNIP3-201ENST00000295225 hADV29S1A0JD25 119 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 M0QY20 66 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 VCYO14598 125 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 TRGV11A0A075B6L2 103 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 TRAV8-4A0A0B4J246 113 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 A0A0J9YX75 114 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 Q6ZSN1 163 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 TCL1BO95988 128 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 CFC1BP0CG36 223 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 CFC1P0CG37 223 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 HOXD3P31249 432 aaPredicted RBP9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 DEFB131AP59861 70 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 KRTAP10-9P60411 292 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 CFHR3Q02985 330 aa9.72□□□□□ -0.85
KCNIP3-201ENST00000295225 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.85
KCNIP3-201ENST00000295225 DAND5Q8N907 189 aa9.71□□□□□ -0.86
KCNIP3-201ENST00000295225 IGHV1OR15-1A0A075B7D0 117 aa9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 SNRPD3P62318 126 aaKnown RBP9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 UBE2E2Q96LR5 201 aa9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 GCN1Q92616 2671 aaKnown RBP9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 IGKV2-29A2NJV5 120 aaPredicted RBP9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 B4DSR2 109 aa9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 NDUFA11Q86Y39 141 aa9.7□□□□□ -0.86
KCNIP3-201ENST00000295225 PRSS2P07478 247 aa9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 USP17L23D6RBM5 183 aa9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 C16orf95Q9H693 158 aa9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 NOTCH2Q04721 2471 aa9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 IGHV3-30P01768 117 aa9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 IGHV3-30-5P0DP03 117 aa9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 BBC3Q96PG8 261 aaPredicted RBP9.69□□□□□ -0.86
KCNIP3-201ENST00000295225 K7EQG2 157 aa9.68□□□□□ -0.86
KCNIP3-201ENST00000295225 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
KCNIP3-201ENST00000295225 ITPR2Q14571 2701 aa9.68□□□□□ -0.86
KCNIP3-201ENST00000295225 UBE2D1P51668 147 aa9.68□□□□□ -0.86
KCNIP3-201ENST00000295225 AMELXQ99217 191 aa9.68□□□□□ -0.86
KCNIP3-201ENST00000295225 TRBV27A0A0K0K1C4 114 aa9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 RBMY1BA6NDE4 496 aaKnown RBP9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 RBMY1EA6NEQ0 496 aaKnown RBP9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 EPM2AB3EWF7 344 aa9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 RBMY1DP0C7P1 496 aaKnown RBP9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 HERVK_113P61574 105 aa9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 MUSTN1Q8IVN3 82 aa9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 UBR5O95071 2799 aaPredicted RBP9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 NXPH4O95158 308 aa9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 ZNF625Q96I27 306 aaPredicted RBP9.67□□□□□ -0.86
KCNIP3-201ENST00000295225 Q1RN00 199 aa9.66□□□□□ -0.86
KCNIP3-201ENST00000295225 LGALS9O00182 355 aa9.66□□□□□ -0.86
KCNIP3-201ENST00000295225 CD28P10747 220 aa9.66□□□□□ -0.86
KCNIP3-201ENST00000295225 ZNF22P17026 224 aaPredicted RBP9.66□□□□□ -0.86
KCNIP3-201ENST00000295225 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
KCNIP3-201ENST00000295225 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
KCNIP3-201ENST00000295225 FAM240AA0A1B0GVK7 77 aa9.65□□□□□ -0.86
KCNIP3-201ENST00000295225 Q6ZRU5 148 aa9.65□□□□□ -0.86
KCNIP3-201ENST00000295225 TMEM61Q8N0U2 210 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms