RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MRPL18Q9H0U6 180 aaKnown RBP17.8■□□□□ 0.44
SSU72-201ENST00000291386 CDC42SE2Q9NRR3 84 aa17.8■□□□□ 0.44
SSU72-201ENST00000291386 UBE2D4Q9Y2X8 147 aa17.8■□□□□ 0.44
SSU72-201ENST00000291386 LOC389332A0A1B0GUA5 103 aa17.79■□□□□ 0.44
SSU72-201ENST00000291386 PGPEP1Q9NXJ5 209 aa17.79■□□□□ 0.44
SSU72-201ENST00000291386 K7EMI3 77 aa17.78■□□□□ 0.44
SSU72-201ENST00000291386 Q8N814 137 aa17.78■□□□□ 0.44
SSU72-201ENST00000291386 ALKBH7Q9BT30 221 aaPredicted RBP17.78■□□□□ 0.44
SSU72-201ENST00000291386 FABP9Q0Z7S8 132 aa17.77■□□□□ 0.44
SSU72-201ENST00000291386 CDPF1Q6NVV7 123 aa17.77■□□□□ 0.44
SSU72-201ENST00000291386 BAALCQ8WXS3 180 aa17.77■□□□□ 0.44
SSU72-201ENST00000291386 NXT2Q9NPJ8 142 aaKnown RBP17.77■□□□□ 0.44
SSU72-201ENST00000291386 WFDC2Q14508 124 aa17.76■□□□□ 0.43
SSU72-201ENST00000291386 DGAT2L7PQ6IED9 249 aa17.76■□□□□ 0.43
SSU72-201ENST00000291386 ZNF664Q8N3J9 261 aa17.76■□□□□ 0.43
SSU72-201ENST00000291386 SMCO4Q9NRQ5 59 aa17.76■□□□□ 0.43
SSU72-201ENST00000291386 DNAH5Q8TE73 4624 aa17.75■□□□□ 0.43
SSU72-201ENST00000291386 TRAPPC1Q9Y5R8 145 aa17.75■□□□□ 0.43
SSU72-201ENST00000291386 IGLV10-54A0A075B6I4 117 aa17.74■□□□□ 0.43
SSU72-201ENST00000291386 RPL39P62891 51 aaKnown RBP17.74■□□□□ 0.43
SSU72-201ENST00000291386 NTN5Q8WTR8 489 aaPredicted RBP17.74■□□□□ 0.43
SSU72-201ENST00000291386 IFI27P40305 119 aaPredicted RBP17.73■□□□□ 0.43
SSU72-201ENST00000291386 ORMDL2Q53FV1 153 aa17.73■□□□□ 0.43
SSU72-201ENST00000291386 SPANXA1Q9NS26 97 aa17.73■□□□□ 0.43
SSU72-201ENST00000291386 C16orf90A8MZG2 172 aa17.72■□□□□ 0.43
SSU72-201ENST00000291386 CBLN2Q8IUK8 224 aa17.71■□□□□ 0.43
SSU72-201ENST00000291386 IGKV3OR2-268A0A0C4DH90 116 aa17.7■□□□□ 0.42
SSU72-201ENST00000291386 LECT2O14960 151 aa17.7■□□□□ 0.42
SSU72-201ENST00000291386 LINC00959A0A1B0GUT2 108 aa17.69■□□□□ 0.42
SSU72-201ENST00000291386 MRPS36P82909 103 aaKnown RBP17.69■□□□□ 0.42
SSU72-201ENST00000291386 PYGO1Q9Y3Y4 419 aa17.69■□□□□ 0.42
SSU72-201ENST00000291386 LINC01546A6NGU7 62 aa17.68■□□□□ 0.42
SSU72-201ENST00000291386 C14orf177Q52M58 125 aa17.68■□□□□ 0.42
SSU72-201ENST00000291386 CHCHD10Q8WYQ3 142 aaPredicted RBP17.68■□□□□ 0.42
SSU72-201ENST00000291386 FAM104AQ969W3 186 aa17.68■□□□□ 0.42
SSU72-201ENST00000291386 CCL25O15444 150 aa17.67■□□□□ 0.42
SSU72-201ENST00000291386 Q6ZUT4 128 aa17.67■□□□□ 0.42
SSU72-201ENST00000291386 PRSS3P2Q8NHM4 247 aa17.67■□□□□ 0.42
SSU72-201ENST00000291386 LRP1BQ9NZR2 4599 aa17.66■□□□□ 0.42
SSU72-201ENST00000291386 USP17L23D6RBM5 183 aa17.66■□□□□ 0.42
SSU72-201ENST00000291386 G0S2P27469 103 aa17.66■□□□□ 0.42
SSU72-201ENST00000291386 C2orf66Q6UXQ4 117 aa17.66■□□□□ 0.42
SSU72-201ENST00000291386 CYSLTR1Q9Y271 337 aa17.66■□□□□ 0.42
SSU72-201ENST00000291386 GAGE12HA6NDE8 117 aa17.65■□□□□ 0.42
SSU72-201ENST00000291386 SS18Q15532 418 aa17.65■□□□□ 0.42
SSU72-201ENST00000291386 IGLV5-52A0A0A0MRZ9 124 aa17.64■□□□□ 0.41
SSU72-201ENST00000291386 FUSP35637 526 aaKnown RBP eCLIP17.64■□□□□ 0.418e-7■□□□□ 11.3
SSU72-201ENST00000291386 C1orf196B1AJZ1 125 aa17.62■□□□□ 0.41
SSU72-201ENST00000291386 NPSP0C0P6 89 aa17.62■□□□□ 0.41
SSU72-201ENST00000291386 FOXI1Q12951 378 aa17.62■□□□□ 0.41
SSU72-201ENST00000291386 RNASE13Q5GAN3 156 aaKnown RBP17.62■□□□□ 0.41
SSU72-201ENST00000291386 C18orf32Q8TCD1 76 aa17.61■□□□□ 0.41
SSU72-201ENST00000291386 OPRPNQ99935 248 aaPredicted RBP17.61■□□□□ 0.41
SSU72-201ENST00000291386 CD164L2Q6UWJ8 174 aa17.6■□□□□ 0.41
SSU72-201ENST00000291386 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.59■□□□□ 0.41
SSU72-201ENST00000291386 IGLV4-3A0A075B6K6 122 aa17.59■□□□□ 0.41
SSU72-201ENST00000291386 GCSHP23434 173 aa17.59■□□□□ 0.41
SSU72-201ENST00000291386 XCL1P47992 114 aa17.59■□□□□ 0.41
SSU72-201ENST00000291386 TOMM6Q96B49 74 aa17.59■□□□□ 0.41
SSU72-201ENST00000291386 LINC01549A6NIU2 74 aa17.58■□□□□ 0.4
SSU72-201ENST00000291386 IGIPA6NJ69 53 aa17.58■□□□□ 0.4
SSU72-201ENST00000291386 PRSS1P07477 247 aa17.58■□□□□ 0.4
SSU72-201ENST00000291386 FA2HQ7L5A8 372 aa17.58■□□□□ 0.4
SSU72-201ENST00000291386 TMEM141Q96I45 108 aa17.58■□□□□ 0.4
SSU72-201ENST00000291386 TRAV13-1A0A0B4J241 112 aa17.57■□□□□ 0.4
SSU72-201ENST00000291386 CFAP161Q6P656 301 aa17.57■□□□□ 0.4
SSU72-201ENST00000291386 TIMM17AQ99595 171 aa17.56■□□□□ 0.4
SSU72-201ENST00000291386 COLCA2A8K830 154 aa17.55■□□□□ 0.4
SSU72-201ENST00000291386 URB1-AS1Q96HZ7 61 aa17.55■□□□□ 0.4
SSU72-201ENST00000291386 KIAA1109Q2LD37 5005 aa17.55■□□□□ 0.4
SSU72-201ENST00000291386 KRTAP10-1P60331 282 aa17.54■□□□□ 0.4
SSU72-201ENST00000291386 C15orf56Q8N910 161 aa17.54■□□□□ 0.4
SSU72-201ENST00000291386 AP5S1Q9NUS5 200 aa17.54■□□□□ 0.4
SSU72-201ENST00000291386 IFITM10A6NMD0 228 aa17.53■□□□□ 0.4
SSU72-201ENST00000291386 LINC00614P0C842 121 aa17.53■□□□□ 0.4
SSU72-201ENST00000291386 AMELXQ99217 191 aa17.53■□□□□ 0.4
SSU72-201ENST00000291386 CDK2AP2O75956 126 aa17.52■□□□□ 0.4
SSU72-201ENST00000291386 RAB5BP61020 215 aa17.52■□□□□ 0.4
SSU72-201ENST00000291386 Q6ZN92 141 aa17.52■□□□□ 0.4
SSU72-201ENST00000291386 TEX43Q6ZNM6 134 aa17.52■□□□□ 0.4
SSU72-201ENST00000291386 PAPPA-AS1Q5QFB9 102 aa17.51■□□□□ 0.39
SSU72-201ENST00000291386 ERASQ7Z444 233 aa17.51■□□□□ 0.39
SSU72-201ENST00000291386 hDV102S1A0JD36 115 aa17.5■□□□□ 0.39
SSU72-201ENST00000291386 VCX2Q9H322 139 aa17.5■□□□□ 0.39
SSU72-201ENST00000291386 GVQW2A0A096LPI5 108 aaPredicted RBP17.49■□□□□ 0.39
SSU72-201ENST00000291386 IGHV1-58A0A0C4DH39 117 aa17.49■□□□□ 0.39
SSU72-201ENST00000291386 TRGC2P03986 189 aa17.49■□□□□ 0.39
SSU72-201ENST00000291386 CNBPP62633 177 aaKnown RBP17.49■□□□□ 0.39
SSU72-201ENST00000291386 LINC00173Q6ZV60 143 aa17.49■□□□□ 0.39
SSU72-201ENST00000291386 SCGB3A1Q96QR1 104 aa17.49■□□□□ 0.39
SSU72-201ENST00000291386 C2orf88Q9BSF0 95 aa17.48■□□□□ 0.39
SSU72-201ENST00000291386 RYR1P21817 5038 aa17.48■□□□□ 0.39
SSU72-201ENST00000291386 APOBP04114 4563 aaKnown RBP17.48■□□□□ 0.39
SSU72-201ENST00000291386 COX7A2LO14548 114 aa17.47■□□□□ 0.39
SSU72-201ENST00000291386 DNAH8Q96JB1 4490 aa17.47■□□□□ 0.39
SSU72-201ENST00000291386 A0A096LNJ9 63 aa17.46■□□□□ 0.39
SSU72-201ENST00000291386 IGHV3OR16-9A0A0B4J2B5 98 aa17.46■□□□□ 0.39
SSU72-201ENST00000291386 SCO1O75880 301 aa17.46■□□□□ 0.39
SSU72-201ENST00000291386 UBE2D1P51668 147 aa17.46■□□□□ 0.39
SSU72-201ENST00000291386 FAM19A3Q7Z5A8 133 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms