RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 LAMA5O15230 3695 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 IGKV2-28A0A075B6P5 120 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 H3BT86 120 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 IGKV2D-28P01615 120 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 WDR83OSQ9Y284 106 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 TDRD6O60522 2096 aaKnown RBP3.32□□□□□ -1.88
NCOA1-201ENST00000288599 FLVCR1-AS1Q8TAF5 88 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 CELA1Q9UNI1 258 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 DCHS1Q96JQ0 3298 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 TICRRQ7Z2Z1 1910 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 KALRNO60229 2985 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 KIAA2026Q5HYC2 2103 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 Q8N7P7 452 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 TRPM6Q9BX84 2022 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 PCDH15Q96QU1 1955 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 CHD3Q12873 2000 aaKnown RBP3.32□□□□□ -1.88
NCOA1-201ENST00000288599 TMEM223A0PJW6 202 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 ADCYAP1P18509 176 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 WFDC10AQ9H1F0 79 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 CRIPTQ9P021 101 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 MDFICQ9P1T7 246 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 CPAMD8Q8IZJ3 1885 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 ZFAND3Q9H8U3 227 aa3.32□□□□□ -1.88
NCOA1-201ENST00000288599 PCNX3Q9H6A9 2034 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 MAP6D1Q9H9H5 199 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 DOCK11Q5JSL3 2073 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 LINC01545Q5VT33 79 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 ENHOQ6UWT2 76 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 CFAP126Q5VTH2 177 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 Q6ZUT4 128 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 C8orf17Q9NRJ1 99 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 YLPM1P49750 1951 aaKnown RBP3.31□□□□□ -1.88
NCOA1-201ENST00000288599 C3orf84H3BNL1 204 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 IGLC1P0CG04 106 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 MUC7Q8TAX7 377 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 RPL39LQ96EH5 51 aaKnown RBP3.31□□□□□ -1.88
NCOA1-201ENST00000288599 APLNQ9ULZ1 77 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 Q6JHZ5 121 aa3.31□□□□□ -1.88
NCOA1-201ENST00000288599 TSHBP01222 138 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 CRYGAP11844 174 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 MSMPQ1L6U9 139 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 M0R378 163 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 SOSTDC1Q6X4U4 206 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 FAM30AQ9NZY2 134 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 TNRC6BQ9UPQ9 1833 aaKnown RBP3.3□□□□□ -1.88
NCOA1-201ENST00000288599 ADGRG4Q8IZF6 3080 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 C17orf82Q86X59 251 aaPredicted RBP3.3□□□□□ -1.88
NCOA1-201ENST00000288599 C11orf53Q8IXP5 236 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 AGPAT4-IT1Q9H0P7 198 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 SMG1Q96Q15 3661 aaKnown RBP3.3□□□□□ -1.88
NCOA1-201ENST00000288599 F8VRH5 84 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 RNASE3P12724 160 aaKnown RBP3.3□□□□□ -1.88
NCOA1-201ENST00000288599 TRBV10-1A0A0K0K1A3 114 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 CREBBPQ92793 2442 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 TP53BP1Q12888 1972 aaPredicted RBP3.3□□□□□ -1.88
NCOA1-201ENST00000288599 H7C423 109 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 VPREB1P12018 145 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 OXLD1Q5BKU9 147 aa3.3□□□□□ -1.88
NCOA1-201ENST00000288599 IGLV4-60A0A075B6I1 120 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 IGLV5-37A0A075B6J1 123 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 Q8N6K4 173 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 LINC00575Q6W349 94 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 TRBV6-6A0A0A6YYG2 114 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 CCKP06307 115 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 PIP4P1Q86T03 277 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.29□□□□□ -1.881e-8■■■■□ 24.4
NCOA1-201ENST00000288599 IGLC6P0CF74 106 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 SMIM10L1P0DMW3 83 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 SMIM10Q96HG1 83 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 EPM2AB3EWF7 344 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 GFRA4Q9GZZ7 299 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 TNRC6AQ8NDV7 1962 aaKnown RBP3.29□□□□□ -1.88
NCOA1-201ENST00000288599 ZZEF1O43149 2961 aa3.29□□□□□ -1.88
NCOA1-201ENST00000288599 TRAV22A0A0B4J277 110 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 Q8N814 137 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 DCHS2Q6V1P9 2916 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 A0A0J9YXV3 536 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 TRBV27A0A0K0K1C4 114 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 FXYD2P54710 66 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 EBI3Q14213 229 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 C11orf71Q6IPW1 123 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 ASH1LQ9NR48 2969 aaKnown RBP3.28□□□□□ -1.88
NCOA1-201ENST00000288599 COL6A6A6NMZ7 2263 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 RPL39P62891 51 aaKnown RBP3.28□□□□□ -1.88
NCOA1-201ENST00000288599 MIR7-3HGQ8N6C7 128 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 ZNF292O60281 2723 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 DYSFO75923 2080 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 PRORYQ9H606 182 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 PSPHP1O15172 72 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 Q6ZSN1 163 aa3.28□□□□□ -1.88
NCOA1-201ENST00000288599 IGLV4-3A0A075B6K6 122 aa3.27□□□□□ -1.89
NCOA1-201ENST00000288599 LELP1Q5T871 98 aa3.27□□□□□ -1.89
NCOA1-201ENST00000288599 Q5VSD8 79 aa3.27□□□□□ -1.89
NCOA1-201ENST00000288599 LINC00114Q6XXX2 140 aa3.27□□□□□ -1.89
NCOA1-201ENST00000288599 AKAP6Q13023 2319 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms